RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 MTMR9Q96QG7 549 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 WDCPQ9H6R7 721 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 GOLGA2P5Q9HBQ8 144 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 ETNK1Q9HBU6 452 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 PCDHA2Q9Y5H9 948 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 EXOC1LA0A1B0GW35 172 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 WDR91A4D1P6 747 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 F8W8V4 182 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 AGRPO00253 132 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 ARIH2O95376 493 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 ANP32DO95626 131 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 SNAI1O95863 264 aaPredicted RBP11.08□□□□□ -0.64
TCOF1-204ENST00000427724 FGRP09769 529 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 KCNA2P16389 499 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 SERPINB6P35237 376 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 TKTL1P51854 596 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 SNRPFP62306 86 aaKnown RBP11.08□□□□□ -0.64
TCOF1-204ENST00000427724 CUL2Q13617 745 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 TRADDQ15628 312 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 ANKRD20A3Q5VUR7 823 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 HAS1Q92839 578 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 PRMT1Q99873 361 aaKnown RBP11.08□□□□□ -0.64
TCOF1-204ENST00000427724 GIT1Q9Y2X7 761 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 C4BP0C0L5 1744 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 ABHD14A-ACY1A0A1B0GW23 586 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 BRAFP15056 766 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 RPL17P18621 184 aaKnown RBP11.08□□□□□ -0.64
TCOF1-204ENST00000427724 RAD23BP54727 409 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 SFSWAPQ12872 951 aaKnown RBP11.08□□□□□ -0.64
TCOF1-204ENST00000427724 BYSLQ13895 437 aaKnown RBP11.08□□□□□ -0.64
TCOF1-204ENST00000427724 SLC29A2Q14542 456 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 C2CD6Q53TS8 623 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 LONP2Q86WA8 852 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 GPR152Q8TDT2 470 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 XPO6Q96QU8 1125 aaKnown RBP11.08□□□□□ -0.64
TCOF1-204ENST00000427724 ERP44Q9BS26 406 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 MKNK1Q9BUB5 465 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 SEZ6LQ9BYH1 1024 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 ADAM33Q9BZ11 813 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 MIR1-1HGQ9H1L0 117 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 UXTQ9UBK9 157 aaPredicted RBP11.08□□□□□ -0.64
TCOF1-204ENST00000427724 GTF2IRD1Q9UHL9 959 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 NDRG2Q9UN36 371 aaKnown RBP11.08□□□□□ -0.64
TCOF1-204ENST00000427724 DOT1LQ8TEK3 1739 aa11.08□□□□□ -0.64
TCOF1-204ENST00000427724 FOXN3O00409 490 aaPredicted RBP11.07□□□□□ -0.64
TCOF1-204ENST00000427724 PJA2O43164 708 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 LZTS3O60299 673 aaPredicted RBP11.07□□□□□ -0.64
TCOF1-204ENST00000427724 PCDH8O95206 1070 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 GSTA1P08263 222 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 GSTA2P09210 222 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 GABRR2P28476 465 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 NDST1P52848 882 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 DUSP4Q13115 394 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 DHX34Q14147 1143 aaKnown RBP11.07□□□□□ -0.64
TCOF1-204ENST00000427724 RAPH1Q70E73 1250 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 TAS2R42Q7RTR8 314 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 ZC3H18Q86VM9 953 aaKnown RBP11.07□□□□□ -0.64
TCOF1-204ENST00000427724 BBOF1Q8ND07 529 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 C1orf131Q8NDD1 294 aaKnown RBP11.07□□□□□ -0.64
TCOF1-204ENST00000427724 ING5Q8WYH8 240 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 ALG13Q9NP73 1137 aaKnown RBP11.07□□□□□ -0.64
TCOF1-204ENST00000427724 ITGA11Q9UKX5 1188 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 G3BP2Q9UN86 482 aaKnown RBP11.07□□□□□ -0.64
TCOF1-204ENST00000427724 CCL16O15467 120 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 CIB2O75838 187 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 MSH2P43246 934 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 GRIK3Q13003 919 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 HIC1Q14526 733 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 LONRF1Q17RB8 773 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 CCDC62Q6P9F0 684 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 WDR49Q8IV35 697 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 SH3KBP1Q96B97 665 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 KLHL11Q9NVR0 708 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 TNFSF13BQ9Y275 285 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 GOLGA8MH3BSY2 632 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 ZNF197O14709 1029 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 PER2O15055 1255 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 KRT7P08729 469 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 COMTP21964 271 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 KCNA5P22460 613 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 CASP5P51878 434 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 LMNB2Q03252 620 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 CYP24A1Q07973 514 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 KIAA1324Q6UXG2 1013 aaKnown RBP11.07□□□□□ -0.64
TCOF1-204ENST00000427724 DENND5BQ6ZUT9 1274 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 SLC2A14Q8TDB8 520 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 AGAP3Q96P47 875 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 SGIP1Q9BQI5 828 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 FBXO44Q9H4M3 255 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 TMBIM4Q9HC24 238 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 CISHQ9NSE2 258 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 PARVAQ9NVD7 372 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 SALL4Q9UJQ4 1053 aa11.07□□□□□ -0.64
TCOF1-204ENST00000427724 hCG_2014768A0A024R1R8 64 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.06□□□□□ -0.64
TCOF1-204ENST00000427724 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.06□□□□□ -0.64
TCOF1-204ENST00000427724 FSBPO95073 299 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 TMEM253P0C7T8 217 aa11.06□□□□□ -0.64
TCOF1-204ENST00000427724 TROVE2P10155 538 aaKnown RBP eCLIP11.06□□□□□ -0.64
TCOF1-204ENST00000427724 SLC2A3P11169 496 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms