RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 B4GALNT4Q76KP1 1039 aa14.63□□□□□ -0.07
APOBEC3D-202ENST00000427494 EXOC3L1Q86VI1 746 aa14.63□□□□□ -0.07
APOBEC3D-202ENST00000427494 MAP7D3Q8IWC1 876 aa14.63□□□□□ -0.07
APOBEC3D-202ENST00000427494 SLC2A14Q8TDB8 520 aa14.63□□□□□ -0.07
APOBEC3D-202ENST00000427494 CLEC4CQ8WTT0 213 aa14.63□□□□□ -0.07
APOBEC3D-202ENST00000427494 ARHGEF2Q92974 986 aaKnown RBP14.63□□□□□ -0.07
APOBEC3D-202ENST00000427494 TTC25Q96NG3 672 aa14.63□□□□□ -0.07
APOBEC3D-202ENST00000427494 TRPV2Q9Y5S1 764 aa14.63□□□□□ -0.07
APOBEC3D-202ENST00000427494 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.63□□□□□ -0.07
APOBEC3D-202ENST00000427494 A0A087WUV0 522 aaPredicted RBP14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 GOLGA8MH3BSY2 632 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 PTGESO14684 152 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 RBP3P10745 1247 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 RPL22P35268 128 aaKnown RBP14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 GJA9P57773 515 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 LILRA4P59901 499 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 ROR1Q01973 937 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 SREBF2Q12772 1141 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 FASTKD3Q14CZ7 662 aaKnown RBP14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 PDK2Q15119 407 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 NOMO1Q15155 1222 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 NBPF20Q3BBV1 942 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 ZC3H12AQ5D1E8 599 aaKnown RBP14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 HP1BP3Q5SSJ5 553 aaPredicted RBP14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 ERMARDQ5T6L9 678 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 C1orf228Q6PIY5 440 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 CENPUQ71F23 418 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 LIMS2Q7Z4I7 341 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 OSTM1Q86WC4 334 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 PPIL6Q8IXY8 311 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 TAB3Q8N5C8 712 aaPredicted RBP14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 FAM71DQ8N9W8 422 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 TEKT4Q8WW24 435 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 ATXN2LQ8WWM7 1075 aaKnown RBP14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 ZFP42Q96MM3 310 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 SNRNP25Q9BV90 132 aaKnown RBP14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 GTF2IRD1Q9UHL9 959 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 FARP1Q9Y4F1 1045 aaPredicted RBP14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 CTSHP09668 335 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 CYBAP13498 195 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 MFSD14CQ5VZR4 134 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 DARS2Q6PI48 645 aaKnown RBP14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 CXCL17Q6UXB2 119 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 SLC26A9Q7LBE3 791 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 ZC3H18Q86VM9 953 aaKnown RBP14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 ZBED8Q8IZ13 594 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 TOP6BLQ8N6T0 577 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 P3H4Q92791 437 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 TNIP3Q96KP6 325 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 RNF157Q96PX1 679 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 PPP1R10Q96QC0 940 aaKnown RBP14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 PCDH18Q9HCL0 1135 aa14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 INTS9Q9NV88 658 aaKnown RBP14.62□□□□□ -0.07
APOBEC3D-202ENST00000427494 SCN10AQ9Y5Y9 1956 aa14.61□□□□□ -0.07
APOBEC3D-202ENST00000427494 CDH16O75309 829 aa14.61□□□□□ -0.07
APOBEC3D-202ENST00000427494 PGK1P00558 417 aa14.61□□□□□ -0.07
APOBEC3D-202ENST00000427494 TFE3P19532 575 aaPredicted RBP14.61□□□□□ -0.07
APOBEC3D-202ENST00000427494 WARSP23381 471 aaKnown RBP14.61□□□□□ -0.07
APOBEC3D-202ENST00000427494 TKTP29401 623 aaKnown RBP14.61□□□□□ -0.07
APOBEC3D-202ENST00000427494 LRPAP1P30533 357 aa14.61□□□□□ -0.07
APOBEC3D-202ENST00000427494 ACADSBP45954 432 aa14.61□□□□□ -0.07
APOBEC3D-202ENST00000427494 HDAC4P56524 1084 aa14.61□□□□□ -0.07
APOBEC3D-202ENST00000427494 PDIA2Q13087 525 aaKnown RBP14.61□□□□□ -0.07
APOBEC3D-202ENST00000427494 HIF1AQ16665 826 aa14.61□□□□□ -0.07
APOBEC3D-202ENST00000427494 CA9Q16790 459 aa14.61□□□□□ -0.07
APOBEC3D-202ENST00000427494 ANKRD20A8PQ5CZ79 823 aa14.61□□□□□ -0.07
APOBEC3D-202ENST00000427494 ANKRD22Q5VYY1 191 aa14.61□□□□□ -0.07
APOBEC3D-202ENST00000427494 GDF6Q6KF10 455 aaPredicted RBP14.61□□□□□ -0.07
APOBEC3D-202ENST00000427494 RSPH3Q86UC2 560 aa14.61□□□□□ -0.07
APOBEC3D-202ENST00000427494 B3GALNT2Q8NCR0 500 aa14.61□□□□□ -0.07
APOBEC3D-202ENST00000427494 CPT1BQ92523 772 aa14.61□□□□□ -0.07
APOBEC3D-202ENST00000427494 TBCBQ99426 244 aa14.61□□□□□ -0.07
APOBEC3D-202ENST00000427494 NCAPGQ9BPX3 1015 aa14.61□□□□□ -0.07
APOBEC3D-202ENST00000427494 ARHGAP39Q9C0H5 1083 aa14.61□□□□□ -0.07
APOBEC3D-202ENST00000427494 CYLDQ9NQC7 956 aa14.61□□□□□ -0.07
APOBEC3D-202ENST00000427494 TBK1Q9UHD2 729 aa14.61□□□□□ -0.07
APOBEC3D-202ENST00000427494 LGALS13Q9UHV8 139 aa14.61□□□□□ -0.07
APOBEC3D-202ENST00000427494 EXOC1LA0A1B0GW35 172 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 MEIS3P2A8K0S8 358 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 FAM155AB1AL88 458 aaPredicted RBP14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 H7C0C1 242 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 CYB561D2O14569 222 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 APOL1O14791 398 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 RARBP10826 455 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 PTPN9P43378 593 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 ATP5OP48047 213 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 RPL34P49207 117 aaKnown RBP14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 FCGRTP55899 365 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 TRIB2Q92519 343 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 WNT8BQ93098 351 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 VPS37BQ9H9H4 285 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 GABRQQ9UN88 632 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 ST3GAL5Q9UNP4 418 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 NAALADL1Q9UQQ1 740 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 FAM169AQ9Y6X4 670 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 FOXO6A8MYZ6 492 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 ANKRD65E5RJM6 399 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 XPO1O14980 1071 aaKnown RBP14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 MDM4O15151 490 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 ALOX15BO15296 676 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms