RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 MDH1BQ5I0G3 518 aa22.76■■□□□ 1.23
CNEP1R1-202ENST00000427478 KIAA0319Q5VV43 1072 aa22.76■■□□□ 1.23
CNEP1R1-202ENST00000427478 SLC26A9Q7LBE3 791 aa22.76■■□□□ 1.23
CNEP1R1-202ENST00000427478 RAET1EQ8TD07 263 aa22.76■■□□□ 1.23
CNEP1R1-202ENST00000427478 PAAF1Q9BRP4 392 aa22.76■■□□□ 1.23
CNEP1R1-202ENST00000427478 C10orf88Q9H8K7 445 aa22.76■■□□□ 1.23
CNEP1R1-202ENST00000427478 CYLDQ9NQC7 956 aa22.76■■□□□ 1.23
CNEP1R1-202ENST00000427478 GPATCH2LQ9NWQ4 482 aa22.76■■□□□ 1.23
CNEP1R1-202ENST00000427478 TIMM13Q9Y5L4 95 aaPredicted RBP22.76■■□□□ 1.23
CNEP1R1-202ENST00000427478 BRCA2P51587 3418 aa22.75■■□□□ 1.23
CNEP1R1-202ENST00000427478 RAB27AP51159 221 aa22.75■■□□□ 1.23
CNEP1R1-202ENST00000427478 DPYSL3Q14195 570 aa22.75■■□□□ 1.23
CNEP1R1-202ENST00000427478 KRT81Q14533 505 aa22.75■■□□□ 1.23
CNEP1R1-202ENST00000427478 DSC3Q14574 896 aa22.75■■□□□ 1.23
CNEP1R1-202ENST00000427478 TRIM71Q2Q1W2 868 aaKnown RBP22.75■■□□□ 1.23
CNEP1R1-202ENST00000427478 DSTYKQ6XUX3 929 aa22.75■■□□□ 1.23
CNEP1R1-202ENST00000427478 PIGZQ86VD9 579 aa22.75■■□□□ 1.23
CNEP1R1-202ENST00000427478 REM2Q8IYK8 340 aaPredicted RBP22.75■■□□□ 1.23
CNEP1R1-202ENST00000427478 HSFY1Q96LI6 401 aa22.75■■□□□ 1.23
CNEP1R1-202ENST00000427478 ADAM2Q99965 735 aa22.75■■□□□ 1.23
CNEP1R1-202ENST00000427478 DDX23Q9BUQ8 820 aaKnown RBP22.75■■□□□ 1.23
CNEP1R1-202ENST00000427478 DUSP16Q9BY84 665 aa22.75■■□□□ 1.23
CNEP1R1-202ENST00000427478 TOMM70O94826 608 aa22.75■■□□□ 1.23
CNEP1R1-202ENST00000427478 POMCP01189 267 aa22.75■■□□□ 1.23
CNEP1R1-202ENST00000427478 IFNB1P01574 187 aa22.75■■□□□ 1.23
CNEP1R1-202ENST00000427478 PECAM1P16284 738 aaPredicted RBP22.75■■□□□ 1.23
CNEP1R1-202ENST00000427478 GPS1Q13098 491 aa22.75■■□□□ 1.23
CNEP1R1-202ENST00000427478 ZC3H12AQ5D1E8 599 aaKnown RBP22.75■■□□□ 1.23
CNEP1R1-202ENST00000427478 AGBL2Q5U5Z8 902 aa22.75■■□□□ 1.23
CNEP1R1-202ENST00000427478 HIBCHQ6NVY1 386 aaPredicted RBP22.75■■□□□ 1.23
CNEP1R1-202ENST00000427478 KDM7AQ6ZMT4 941 aa22.75■■□□□ 1.23
CNEP1R1-202ENST00000427478 TRMT10CQ7L0Y3 403 aaKnown RBP22.75■■□□□ 1.23
CNEP1R1-202ENST00000427478 HOOK3Q86VS8 718 aa22.75■■□□□ 1.23
CNEP1R1-202ENST00000427478 MED10Q9BTT4 135 aa22.75■■□□□ 1.23
CNEP1R1-202ENST00000427478 MAK16Q9BXY0 300 aaKnown RBP22.75■■□□□ 1.23
CNEP1R1-202ENST00000427478 CAPS2Q9BXY5 557 aa22.75■■□□□ 1.23
CNEP1R1-202ENST00000427478 TSC2P49815 1807 aa22.74■■□□□ 1.23
CNEP1R1-202ENST00000427478 DNALI1O14645 258 aaPredicted RBP22.74■■□□□ 1.23
CNEP1R1-202ENST00000427478 ZNF623O75123 536 aa22.74■■□□□ 1.23
CNEP1R1-202ENST00000427478 BEST1O76090 585 aa22.74■■□□□ 1.23
CNEP1R1-202ENST00000427478 ENDOD1O94919 500 aa22.74■■□□□ 1.23
CNEP1R1-202ENST00000427478 HPDP32754 393 aaPredicted RBP22.74■■□□□ 1.23
CNEP1R1-202ENST00000427478 HDAC4P56524 1084 aa22.74■■□□□ 1.23
CNEP1R1-202ENST00000427478 SKOR1P84550 965 aa22.74■■□□□ 1.23
CNEP1R1-202ENST00000427478 ADIGQ0VDE8 80 aa22.74■■□□□ 1.23
CNEP1R1-202ENST00000427478 PAQR9Q6ZVX9 377 aa22.74■■□□□ 1.23
CNEP1R1-202ENST00000427478 SNRNP25Q9BV90 132 aaKnown RBP22.74■■□□□ 1.23
CNEP1R1-202ENST00000427478 FRMD8P1Q9BZ68 369 aaPredicted RBP22.74■■□□□ 1.23
CNEP1R1-202ENST00000427478 APOC4-APOC2K7ER74 178 aa22.73■■□□□ 1.23
CNEP1R1-202ENST00000427478 CABYRO75952 493 aa22.73■■□□□ 1.23
CNEP1R1-202ENST00000427478 APOC2P02655 101 aa22.73■■□□□ 1.23
CNEP1R1-202ENST00000427478 FAM163BP0C2L3 166 aa22.73■■□□□ 1.23
CNEP1R1-202ENST00000427478 NPR3P17342 541 aa22.73■■□□□ 1.23
CNEP1R1-202ENST00000427478 SLC8A3P57103 927 aa22.73■■□□□ 1.23
CNEP1R1-202ENST00000427478 TTC19Q6DKK2 380 aaPredicted RBP22.73■■□□□ 1.23
CNEP1R1-202ENST00000427478 ADAM33Q9BZ11 813 aa22.73■■□□□ 1.23
CNEP1R1-202ENST00000427478 TSPYL1Q9H0U9 437 aa22.73■■□□□ 1.23
CNEP1R1-202ENST00000427478 ADAM7Q9H2U9 754 aa22.73■■□□□ 1.23
CNEP1R1-202ENST00000427478 CRTAC1Q9NQ79 661 aa22.73■■□□□ 1.23
CNEP1R1-202ENST00000427478 CREBZFQ9NS37 354 aa22.73■■□□□ 1.23
CNEP1R1-202ENST00000427478 NOVA2Q9UNW9 492 aaKnown RBP22.73■■□□□ 1.23
CNEP1R1-202ENST00000427478 A0A0U1RQF3 1178 aa22.73■■□□□ 1.23
CNEP1R1-202ENST00000427478 SMIM23A6NLE4 172 aa22.73■■□□□ 1.23
CNEP1R1-202ENST00000427478 SHOX2O60902 331 aaPredicted RBP22.73■■□□□ 1.23
CNEP1R1-202ENST00000427478 CAND2O75155 1236 aa22.73■■□□□ 1.23
CNEP1R1-202ENST00000427478 ACSL3O95573 720 aa22.73■■□□□ 1.23
CNEP1R1-202ENST00000427478 SCNN1AP37088 669 aa22.73■■□□□ 1.23
CNEP1R1-202ENST00000427478 PTPN9P43378 593 aa22.73■■□□□ 1.23
CNEP1R1-202ENST00000427478 GDF10P55107 478 aa22.73■■□□□ 1.23
CNEP1R1-202ENST00000427478 UPP1Q16831 310 aa22.73■■□□□ 1.23
CNEP1R1-202ENST00000427478 BOLA3Q53S33 107 aa22.73■■□□□ 1.23
CNEP1R1-202ENST00000427478 NDRG1Q92597 394 aaKnown RBP22.73■■□□□ 1.23
CNEP1R1-202ENST00000427478 SYT15Q9BQS2 421 aa22.73■■□□□ 1.23
CNEP1R1-202ENST00000427478 PCDH9Q9HC56 1237 aa22.73■■□□□ 1.23
CNEP1R1-202ENST00000427478 INPP5FQ9Y2H2 1132 aa22.73■■□□□ 1.23
CNEP1R1-202ENST00000427478 FRMPD3Q5JV73 1810 aa22.73■■□□□ 1.23
CNEP1R1-202ENST00000427478 ATXN1P54253 815 aaKnown RBP22.72■■□□□ 1.23
CNEP1R1-202ENST00000427478 EIF3EP60228 445 aaKnown RBP22.72■■□□□ 1.23
CNEP1R1-202ENST00000427478 CA9Q16790 459 aa22.72■■□□□ 1.23
CNEP1R1-202ENST00000427478 PAN2Q504Q3 1202 aaKnown RBP22.72■■□□□ 1.23
CNEP1R1-202ENST00000427478 FAM26DQ5JW98 314 aa22.72■■□□□ 1.23
CNEP1R1-202ENST00000427478 NPNTQ6UXI9 565 aa22.72■■□□□ 1.23
CNEP1R1-202ENST00000427478 TMEM86AQ8N2M4 240 aa22.72■■□□□ 1.23
CNEP1R1-202ENST00000427478 TEKT4Q8WW24 435 aa22.72■■□□□ 1.23
CNEP1R1-202ENST00000427478 GLT1D1Q96MS3 346 aa22.72■■□□□ 1.23
CNEP1R1-202ENST00000427478 KRT82Q9NSB4 513 aa22.72■■□□□ 1.23
CNEP1R1-202ENST00000427478 TLDC2A0PJX2 215 aa22.72■■□□□ 1.23
CNEP1R1-202ENST00000427478 DCDC2CA8MYV0 355 aa22.72■■□□□ 1.23
CNEP1R1-202ENST00000427478 I3L4J1 428 aa22.72■■□□□ 1.23
CNEP1R1-202ENST00000427478 RPL9P32969 192 aaKnown RBP22.72■■□□□ 1.23
CNEP1R1-202ENST00000427478 LHX1P48742 406 aa22.72■■□□□ 1.23
CNEP1R1-202ENST00000427478 GNGT1P63211 74 aa22.72■■□□□ 1.23
CNEP1R1-202ENST00000427478 LEKR1Q6ZMV7 388 aa22.72■■□□□ 1.23
CNEP1R1-202ENST00000427478 CLEC20AQ6ZU45 233 aa22.72■■□□□ 1.23
CNEP1R1-202ENST00000427478 MAP7D3Q8IWC1 876 aa22.72■■□□□ 1.23
CNEP1R1-202ENST00000427478 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.72■■□□□ 1.23
CNEP1R1-202ENST00000427478 C11orf84Q9BUA3 381 aaPredicted RBP22.72■■□□□ 1.23
CNEP1R1-202ENST00000427478 CFHR5Q9BXR6 569 aa22.72■■□□□ 1.23
CNEP1R1-202ENST00000427478 MCF2LO15068 1137 aa22.71■■□□□ 1.23
CNEP1R1-202ENST00000427478 MAP3K7CLP57077 242 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms