RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 ARFGAP3Q9NP61 516 aa4.55□□□□□ -1.68
HMGB1P11-201ENST00000413899 TM7SF3Q9NS93 570 aa4.55□□□□□ -1.68
HMGB1P11-201ENST00000413899 DLL3Q9NYJ7 618 aa4.55□□□□□ -1.68
HMGB1P11-201ENST00000413899 USP22Q9UPT9 525 aa4.55□□□□□ -1.68
HMGB1P11-201ENST00000413899 DRG1Q9Y295 367 aaKnown RBP4.55□□□□□ -1.68
HMGB1P11-201ENST00000413899 MAN2B2Q9Y2E5 1009 aa4.55□□□□□ -1.68
HMGB1P11-201ENST00000413899 ABHD14A-ACY1A0A1B0GW23 586 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 OR2W5A6NFC9 320 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 MGST3O14880 152 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 HGFP14210 728 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 IDEP14735 1019 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 WT1P19544 449 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 ITPKBP27987 946 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 PPM1AP35813 382 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 GATMP50440 423 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 PGDP52209 483 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 SOX10P56693 466 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 STK3Q13188 491 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 CLCA4Q14CN2 919 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 SLC5A9Q2M3M2 681 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 MRNIPQ6NTE8 343 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 CRTC1Q6UUV9 634 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 Q6ZWC4 215 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 PARS2Q7L3T8 475 aaKnown RBP4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 CAND1Q86VP6 1230 aaKnown RBP4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 GLIS1Q8NBF1 620 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 CCDC150Q8NCX0 1101 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 GPR150Q8NGU9 434 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 MBD3L2Q8NHZ7 208 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 CAGE1Q8TC20 777 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 ZNF566Q969W8 418 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 LRRC46Q96FV0 321 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 TMEM41AQ96HV5 264 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 RPS6KC1Q96S38 1066 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 MPHOSPH6Q99547 160 aaKnown RBP4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 TTLL2Q9BWV7 592 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 AS3MTQ9HBK9 375 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 NECTIN3Q9NQS3 549 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 RGL1Q9NZL6 768 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 SLC17A6Q9P2U8 582 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 TAGLN3Q9UI15 199 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 RIMKLBQ9ULI2 386 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 PCDHGB2Q9Y5G2 931 aa4.54□□□□□ -1.68
HMGB1P11-201ENST00000413899 COL15A1P39059 1388 aa4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 FAM234BA2RU67 622 aa4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 AGPSO00116 658 aa4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 ADAMTS3O15072 1205 aa4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 NDST3O95803 873 aa4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 DLDP09622 509 aaKnown RBP4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 EGR1P18146 543 aa4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 ABCB4P21439 1286 aa4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 ATICP31939 592 aa4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 GKP32189 559 aa4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 IL6STP40189 918 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 TPTEP56180 551 aa4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 BIRC2Q13490 618 aa4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 KRT72Q14CN4 511 aa4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 MAPKAPK3Q16644 382 aa4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 CYP1B1Q16678 543 aa4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 AARS2Q5JTZ9 985 aaKnown RBP4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 FAXCQ5TGI0 409 aa4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 TBC1D5Q92609 795 aa4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 CTHRC1Q96CG8 243 aa4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 ZBTB45Q96K62 511 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 UROC1Q96N76 676 aa4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 BBC3Q96PG8 261 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 HIST1H2AAQ96QV6 131 aa4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 THAP7Q9BT49 309 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 DUSP26Q9BV47 211 aa4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 MRIQ9BWK5 157 aa4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 FSD1LQ9BXM9 530 aa4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 WDR12Q9GZL7 423 aaKnown RBP4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 SLC25A32Q9H2D1 315 aa4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 PLCB1Q9NQ66 1216 aa4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 DUSP22Q9NRW4 184 aa4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 CEP83Q9Y592 693 aa4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 COMMD10Q9Y6G5 202 aa4.53□□□□□ -1.68
HMGB1P11-201ENST00000413899 H0YIZ8 118 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 PSMD9O00233 223 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 SNX2O60749 519 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 COQ9O75208 318 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 VNN1O95497 513 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 EBLN1P0CF75 366 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 ARP10275 920 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 CD19P15391 556 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 NDUFB7P17568 137 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 DRD4P21917 467 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 MST1P26927 711 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 RBL1P28749 1068 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 CTGFP29279 349 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 HTR7P34969 479 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 TECP42680 631 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 MTHFSP49914 203 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 OS9Q13438 667 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 TBC1D25Q3MII6 688 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 ZNF362Q5T0B9 420 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 ARL6IP4Q66PJ3 421 aaKnown RBP4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 RAP1GAP2Q684P5 730 aa4.52□□□□□ -1.69
HMGB1P11-201ENST00000413899 USP49Q70CQ1 688 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms