RNA–Protein interactions for RNA: ENST00000412036.6

CXXC1-202, Transcript of CXXC finger protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXXC1, Length 2,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-202ENST00000412036 MFSD7Q6UXD7 560 aa18.92■□□□□ 0.62
CXXC1-202ENST00000412036 SLC26A9Q7LBE3 791 aa18.92■□□□□ 0.62
CXXC1-202ENST00000412036 SLC13A5Q86YT5 568 aaPredicted RBP18.92■□□□□ 0.62
CXXC1-202ENST00000412036 ATAD1Q8NBU5 361 aa18.92■□□□□ 0.62
CXXC1-202ENST00000412036 KCTD13Q8WZ19 329 aa18.92■□□□□ 0.62
CXXC1-202ENST00000412036 RNF14Q9UBS8 474 aa18.92■□□□□ 0.62
CXXC1-202ENST00000412036 MRPL42Q9Y6G3 142 aaKnown RBP18.92■□□□□ 0.62
CXXC1-202ENST00000412036 PATJQ8NI35 1801 aa18.92■□□□□ 0.62
CXXC1-202ENST00000412036 KIAA1671Q9BY89 1806 aa18.92■□□□□ 0.62
CXXC1-202ENST00000412036 ABHD14A-ACY1A0A1B0GW23 586 aa18.91■□□□□ 0.62
CXXC1-202ENST00000412036 RAD51CO43502 376 aa18.91■□□□□ 0.62
CXXC1-202ENST00000412036 PSTPIP1O43586 416 aa18.91■□□□□ 0.62
CXXC1-202ENST00000412036 GLI1P08151 1106 aa18.91■□□□□ 0.62
CXXC1-202ENST00000412036 RALAP11233 206 aa18.91■□□□□ 0.62
CXXC1-202ENST00000412036 H2AFXP16104 143 aaPredicted RBP18.91■□□□□ 0.62
CXXC1-202ENST00000412036 HDAC4P56524 1084 aa18.91■□□□□ 0.62
CXXC1-202ENST00000412036 GSPT2Q8IYD1 628 aaKnown RBP18.91■□□□□ 0.62
CXXC1-202ENST00000412036 KATNAL2Q8IYT4 538 aa18.91■□□□□ 0.62
CXXC1-202ENST00000412036 SMARCD1Q96GM5 515 aa18.91■□□□□ 0.62
CXXC1-202ENST00000412036 TMPRSS4Q9NRS4 437 aa18.91■□□□□ 0.62
CXXC1-202ENST00000412036 CEP290O15078 2479 aa18.91■□□□□ 0.62
CXXC1-202ENST00000412036 HOXA2O43364 376 aa18.91■□□□□ 0.62
CXXC1-202ENST00000412036 LINC00271P0C7V0 271 aa18.91■□□□□ 0.62
CXXC1-202ENST00000412036 MRPS5P82675 430 aaKnown RBP18.91■□□□□ 0.62
CXXC1-202ENST00000412036 ZNF365Q70YC5 407 aa18.91■□□□□ 0.62
CXXC1-202ENST00000412036 RNF168Q8IYW5 571 aaPredicted RBP18.91■□□□□ 0.62
CXXC1-202ENST00000412036 SPATA18Q8TC71 538 aa18.91■□□□□ 0.62
CXXC1-202ENST00000412036 GPR152Q8TDT2 470 aa18.91■□□□□ 0.62
CXXC1-202ENST00000412036 MRPL9Q9BYD2 267 aaKnown RBP18.91■□□□□ 0.62
CXXC1-202ENST00000412036 GPATCH2LQ9NWQ4 482 aa18.91■□□□□ 0.62
CXXC1-202ENST00000412036 ABI2Q9NYB9 513 aaPredicted RBP18.91■□□□□ 0.62
CXXC1-202ENST00000412036 ESYT3A0FGR9 886 aa18.9■□□□□ 0.62
CXXC1-202ENST00000412036 ARPP19P56211 112 aa18.9■□□□□ 0.62
CXXC1-202ENST00000412036 CA9Q16790 459 aa18.9■□□□□ 0.62
CXXC1-202ENST00000412036 CTXN3Q4LDR2 81 aa18.9■□□□□ 0.62
CXXC1-202ENST00000412036 DEFB106AQ8N104 65 aa18.9■□□□□ 0.62
CXXC1-202ENST00000412036 THEM5Q8N1Q8 247 aa18.9■□□□□ 0.62
CXXC1-202ENST00000412036 GPR161Q8N6U8 529 aaKnown RBP18.9■□□□□ 0.62
CXXC1-202ENST00000412036 FAM172AQ8WUF8 416 aa18.9■□□□□ 0.62
CXXC1-202ENST00000412036 ATG4AQ8WYN0 398 aa18.9■□□□□ 0.62
CXXC1-202ENST00000412036 TMEM175Q9BSA9 504 aa18.9■□□□□ 0.62
CXXC1-202ENST00000412036 CNPY3Q9BT09 278 aa18.9■□□□□ 0.62
CXXC1-202ENST00000412036 COLEC11Q9BWP8 271 aa18.9■□□□□ 0.62
CXXC1-202ENST00000412036 AMACRQ9UHK6 382 aa18.9■□□□□ 0.62
CXXC1-202ENST00000412036 NAALADL1Q9UQQ1 740 aa18.9■□□□□ 0.62
CXXC1-202ENST00000412036 TNFRSF10BO14763 440 aa18.9■□□□□ 0.62
CXXC1-202ENST00000412036 SYN3O14994 580 aa18.9■□□□□ 0.62
CXXC1-202ENST00000412036 DAOAP59103 153 aa18.9■□□□□ 0.62
CXXC1-202ENST00000412036 KLF1Q13351 362 aaPredicted RBP18.9■□□□□ 0.62
CXXC1-202ENST00000412036 DDR2Q16832 855 aa18.9■□□□□ 0.62
CXXC1-202ENST00000412036 FAM182AQ5T1J6 154 aa18.9■□□□□ 0.62
CXXC1-202ENST00000412036 SLITRK1Q96PX8 696 aa18.9■□□□□ 0.62
CXXC1-202ENST00000412036 TBCBQ99426 244 aa18.9■□□□□ 0.62
CXXC1-202ENST00000412036 USP18Q9UMW8 372 aa18.9■□□□□ 0.62
CXXC1-202ENST00000412036 SF3B1O75533 1304 aaKnown RBP eCLIP18.9■□□□□ 0.624e-7■■■■■ 40.1
CXXC1-202ENST00000412036 DPYSL4O14531 572 aa18.89■□□□□ 0.61
CXXC1-202ENST00000412036 SART1O43290 800 aaKnown RBP18.89■□□□□ 0.61
CXXC1-202ENST00000412036 TRUB2O95900 331 aaKnown RBP18.89■□□□□ 0.61
CXXC1-202ENST00000412036 TSPY1Q01534 308 aa18.89■□□□□ 0.61
CXXC1-202ENST00000412036 RNF19BQ6ZMZ0 732 aa18.89■□□□□ 0.61
CXXC1-202ENST00000412036 SPRED2Q7Z698 418 aa18.89■□□□□ 0.61
CXXC1-202ENST00000412036 TMEM199Q8N511 208 aa18.89■□□□□ 0.61
CXXC1-202ENST00000412036 IGSF21Q96ID5 467 aa18.89■□□□□ 0.61
CXXC1-202ENST00000412036 LRRC4Q9HBW1 653 aa18.89■□□□□ 0.61
CXXC1-202ENST00000412036 NGRNQ9NPE2 291 aaKnown RBP18.89■□□□□ 0.61
CXXC1-202ENST00000412036 IL23AQ9NPF7 189 aa18.89■□□□□ 0.61
CXXC1-202ENST00000412036 CYLDQ9NQC7 956 aa18.89■□□□□ 0.61
CXXC1-202ENST00000412036 ZNF446Q9NWS9 450 aa18.89■□□□□ 0.61
CXXC1-202ENST00000412036 ZNF638Q14966 1978 aaKnown RBP18.89■□□□□ 0.61
CXXC1-202ENST00000412036 I6L893 689 aaPredicted RBP18.89■□□□□ 0.61
CXXC1-202ENST00000412036 FSCN2O14926 492 aa18.89■□□□□ 0.61
CXXC1-202ENST00000412036 KCNT2Q6UVM3 1135 aa18.89■□□□□ 0.61
CXXC1-202ENST00000412036 C7orf61Q8IZ16 206 aa18.89■□□□□ 0.61
CXXC1-202ENST00000412036 ADAM32Q8TC27 787 aa18.89■□□□□ 0.61
CXXC1-202ENST00000412036 C1orf54Q8WWF1 131 aa18.89■□□□□ 0.61
CXXC1-202ENST00000412036 FAM149B1Q96BN6 582 aa18.89■□□□□ 0.61
CXXC1-202ENST00000412036 RPGRIP1Q96KN7 1286 aa18.89■□□□□ 0.61
CXXC1-202ENST00000412036 PRDM10Q9NQV6 1147 aa18.89■□□□□ 0.61
CXXC1-202ENST00000412036 ANLNQ9NQW6 1124 aa18.89■□□□□ 0.61
CXXC1-202ENST00000412036 CHST7Q9NS84 486 aa18.89■□□□□ 0.61
CXXC1-202ENST00000412036 SLC27A5Q9Y2P5 690 aa18.89■□□□□ 0.61
CXXC1-202ENST00000412036 COL4A4P53420 1690 aaPredicted RBP18.89■□□□□ 0.61
CXXC1-202ENST00000412036 XIRP2A4UGR9 3374 aa18.89■□□□□ 0.61
CXXC1-202ENST00000412036 TRAPPC3O43617 180 aa18.88■□□□□ 0.61
CXXC1-202ENST00000412036 SEC31AO94979 1220 aaKnown RBP18.88■□□□□ 0.61
CXXC1-202ENST00000412036 KRT1P04264 644 aa18.88■□□□□ 0.61
CXXC1-202ENST00000412036 ACADSBP45954 432 aa18.88■□□□□ 0.61
CXXC1-202ENST00000412036 KCNJ1P48048 391 aa18.88■□□□□ 0.61
CXXC1-202ENST00000412036 CLCN6P51797 869 aa18.88■□□□□ 0.61
CXXC1-202ENST00000412036 USP46P62068 366 aa18.88■□□□□ 0.61
CXXC1-202ENST00000412036 IFRD2Q12894 506 aaPredicted RBP18.88■□□□□ 0.61
CXXC1-202ENST00000412036 MMRN1Q13201 1228 aa18.88■□□□□ 0.61
CXXC1-202ENST00000412036 ZC3H12AQ5D1E8 599 aaKnown RBP18.88■□□□□ 0.61
CXXC1-202ENST00000412036 SEL1L2Q5TEA6 688 aa18.88■□□□□ 0.61
CXXC1-202ENST00000412036 CENPIQ92674 756 aaPredicted RBP18.88■□□□□ 0.61
CXXC1-202ENST00000412036 DDX23Q9BUQ8 820 aaKnown RBP18.88■□□□□ 0.61
CXXC1-202ENST00000412036 C5orf42Q9H799 3197 aa18.88■□□□□ 0.61
CXXC1-202ENST00000412036 EYSQ5T1H1 3165 aa18.88■□□□□ 0.61
CXXC1-202ENST00000412036 C2CD2LO14523 706 aa18.88■□□□□ 0.61
CXXC1-202ENST00000412036 ZRANB2O95218 330 aaKnown RBP eCLIP18.88■□□□□ 0.613e-6■■■■□ 25.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms