RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 HSPA1AP0DMV8 641 aaKnown RBP5.78□□□□□ -1.48
EPHA4-202ENST00000409854 HSPA1BP0DMV9 641 aaKnown RBP5.78□□□□□ -1.48
EPHA4-202ENST00000409854 RARAP10276 462 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 NEFHP12036 1026 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 PDGFRAP16234 1089 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 CHRNA3P32297 505 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 SLC11A1P49279 550 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 ARSEP51690 589 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 MRPS5P82675 430 aaKnown RBP5.78□□□□□ -1.48
EPHA4-202ENST00000409854 ADIGQ0VDE8 80 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 DHX34Q14147 1143 aaKnown RBP5.78□□□□□ -1.48
EPHA4-202ENST00000409854 IKBKEQ14164 716 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 HADHQ16836 314 aaKnown RBP5.78□□□□□ -1.48
EPHA4-202ENST00000409854 EFHC1Q5JVL4 640 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.78□□□□□ -1.48
EPHA4-202ENST00000409854 BHLHA9Q7RTU4 235 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 NECAB2Q7Z6G3 386 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 DEFB128Q7Z7B8 93 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 RNF168Q8IYW5 571 aaPredicted RBP5.78□□□□□ -1.48
EPHA4-202ENST00000409854 CMASQ8NFW8 434 aaPredicted RBP5.78□□□□□ -1.48
EPHA4-202ENST00000409854 FAM71BQ8TC56 605 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 NT5C3BQ969T7 300 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 TRIM43Q96BQ3 446 aaPredicted RBP5.78□□□□□ -1.48
EPHA4-202ENST00000409854 ZNF689Q96CS4 500 aaPredicted RBP5.78□□□□□ -1.48
EPHA4-202ENST00000409854 RUNDC3BQ96NL0 473 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 SLC2A13Q96QE2 648 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 PEBP4Q96S96 227 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 TMEM209Q96SK2 561 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 MED10Q9BTT4 135 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 DDX23Q9BUQ8 820 aaKnown RBP5.78□□□□□ -1.48
EPHA4-202ENST00000409854 COLEC11Q9BWP8 271 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 CWH43Q9H720 699 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 CNGB3Q9NQW8 809 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 ZNF446Q9NWS9 450 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 TBC1D4O60343 1298 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 HSF2BPO75031 334 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 RNF8O76064 485 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 GALTP07902 379 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 LCP1P13796 627 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 ITGB8P26012 769 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 MIPP30301 263 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 CDKN2BP42772 138 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 PTGIRP43119 386 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 FNTAP49354 379 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 MAP3K7CLP57077 242 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 TSPY1Q01534 308 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 ATP13A4Q4VNC1 1196 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 CCNI2Q6ZMN8 369 aaPredicted RBP5.78□□□□□ -1.48
EPHA4-202ENST00000409854 SPOCD1Q6ZMY3 1216 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 VSIG1Q86XK7 387 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 KLHL7Q8IXQ5 586 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 TEKT4Q8WW24 435 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 ADAM33Q9BZ11 813 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 OSBPL8Q9BZF1 889 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 HCSTQ9UBK5 93 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 MTUS1Q9ULD2 1270 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 USP18Q9UMW8 372 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 SF3B1O75533 1304 aaKnown RBP eCLIP5.78□□□□□ -1.48
EPHA4-202ENST00000409854 hCG_1818297A0A087WSY0 165 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 TBKBP1A7MCY6 615 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 ZNF487B1APH4 448 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 EFCAB14O75071 495 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 HEXIM1O94992 359 aaKnown RBP5.78□□□□□ -1.48
EPHA4-202ENST00000409854 KRT1P04264 644 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 RALAP11233 206 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 SDC4P31431 198 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 MATKP42679 507 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 DAOAP59103 153 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 ELAVL2Q12926 359 aaKnown RBP5.78□□□□□ -1.48
EPHA4-202ENST00000409854 C15orf59Q2T9L4 293 aaPredicted RBP5.78□□□□□ -1.48
EPHA4-202ENST00000409854 VARS2Q5ST30 1063 aaKnown RBP5.78□□□□□ -1.48
EPHA4-202ENST00000409854 BEND6Q5SZJ8 279 aaPredicted RBP5.78□□□□□ -1.48
EPHA4-202ENST00000409854 SH3PXD2AQ5TCZ1 1133 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 OTUD1Q5VV17 481 aaPredicted RBP5.78□□□□□ -1.48
EPHA4-202ENST00000409854 PM20D1Q6GTS8 502 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 MFSD5Q6N075 450 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 TTC27Q6P3X3 843 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 MFSD7Q6UXD7 560 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 STRADAQ7RTN6 431 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 GPRIN1Q7Z2K8 1008 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 CCDC26Q8TAB7 109 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 IRGQQ8WZA9 623 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 RAPGEF5Q92565 580 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 TOP1MTQ969P6 601 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 FUBP3Q96I24 572 aaKnown RBP eCLIP5.78□□□□□ -1.48
EPHA4-202ENST00000409854 CFAP57Q96MR6 1250 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 KCNK16Q96T55 309 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 TBCBQ99426 244 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 OXCT2Q9BYC2 517 aaPredicted RBP5.78□□□□□ -1.48
EPHA4-202ENST00000409854 GPR62Q9BZJ7 368 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 DMAP1Q9NPF5 467 aaPredicted RBP5.78□□□□□ -1.48
EPHA4-202ENST00000409854 PRG3Q9Y2Y8 225 aaPredicted RBP5.78□□□□□ -1.48
EPHA4-202ENST00000409854 USP3Q9Y6I4 520 aa5.78□□□□□ -1.48
EPHA4-202ENST00000409854 FAM187AA6NFU0 413 aa5.77□□□□□ -1.49
EPHA4-202ENST00000409854 OR6C75A6NL08 312 aa5.77□□□□□ -1.49
EPHA4-202ENST00000409854 MDM4O15151 490 aa5.77□□□□□ -1.49
EPHA4-202ENST00000409854 ERLIN1O75477 346 aa5.77□□□□□ -1.49
EPHA4-202ENST00000409854 TADA2AO75478 443 aa5.77□□□□□ -1.49
EPHA4-202ENST00000409854 GRAP2O75791 330 aa5.77□□□□□ -1.49
EPHA4-202ENST00000409854 BAIAP3O94812 1187 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms