RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 FZD5Q13467 585 aa26.89■■□□□ 1.9
U2AF1-203ENST00000398137 SARM1Q6SZW1 724 aa26.89■■□□□ 1.9
U2AF1-203ENST00000398137 VSTM1Q6UX27 236 aa26.89■■□□□ 1.9
U2AF1-203ENST00000398137 TPRG1Q6ZUI0 275 aa26.89■■□□□ 1.9
U2AF1-203ENST00000398137 GPIHBP1Q8IV16 184 aa26.89■■□□□ 1.9
U2AF1-203ENST00000398137 FAM71AQ8IYT1 594 aa26.89■■□□□ 1.9
U2AF1-203ENST00000398137 ZNF687Q8N1G0 1237 aa26.89■■□□□ 1.9
U2AF1-203ENST00000398137 GIPC2Q8TF65 315 aa26.89■■□□□ 1.9
U2AF1-203ENST00000398137 LRRC3BQ96PB8 259 aa26.89■■□□□ 1.9
U2AF1-203ENST00000398137 ACP6Q9NPH0 428 aa26.89■■□□□ 1.9
U2AF1-203ENST00000398137 OBSL1O75147 1896 aa26.89■■□□□ 1.89
U2AF1-203ENST00000398137 FANCMQ8IYD8 2048 aa26.89■■□□□ 1.89
U2AF1-203ENST00000398137 ARNTLO00327 626 aa26.88■■□□□ 1.89
U2AF1-203ENST00000398137 CYP26A1O43174 497 aa26.88■■□□□ 1.89
U2AF1-203ENST00000398137 TARSP26639 723 aaKnown RBP26.88■■□□□ 1.89
U2AF1-203ENST00000398137 JAM2P57087 298 aa26.88■■□□□ 1.89
U2AF1-203ENST00000398137 RPL10AP62906 217 aaKnown RBP26.88■■□□□ 1.89
U2AF1-203ENST00000398137 GOLGA7BQ2TAP0 167 aa26.88■■□□□ 1.89
U2AF1-203ENST00000398137 ARHGAP17Q68EM7 881 aa26.88■■□□□ 1.89
U2AF1-203ENST00000398137 DNASE1L2Q92874 299 aa26.88■■□□□ 1.89
U2AF1-203ENST00000398137 SPAG5Q96R06 1193 aa26.88■■□□□ 1.89
U2AF1-203ENST00000398137 ZSWIM1Q9BR11 485 aa26.88■■□□□ 1.89
U2AF1-203ENST00000398137 TRMT61BQ9BVS5 477 aaKnown RBP26.88■■□□□ 1.89
U2AF1-203ENST00000398137 CFAP54Q96N23 3096 aa26.88■■□□□ 1.89
U2AF1-203ENST00000398137 PRR23AA6NEV1 266 aa26.87■■□□□ 1.89
U2AF1-203ENST00000398137 FAM170BA6NMN3 283 aa26.87■■□□□ 1.89
U2AF1-203ENST00000398137 HEPACAM2A8MVW5 462 aa26.87■■□□□ 1.89
U2AF1-203ENST00000398137 F8VP50 259 aa26.87■■□□□ 1.89
U2AF1-203ENST00000398137 O00370 1275 aa26.87■■□□□ 1.89
U2AF1-203ENST00000398137 FAM200BP0CF97 657 aa26.87■■□□□ 1.89
U2AF1-203ENST00000398137 PSMC3P17980 439 aa26.87■■□□□ 1.89
U2AF1-203ENST00000398137 ANXA13P27216 316 aa26.87■■□□□ 1.89
U2AF1-203ENST00000398137 GABRR2P28476 465 aa26.87■■□□□ 1.89
U2AF1-203ENST00000398137 UBXN2BQ14CS0 331 aa26.87■■□□□ 1.89
U2AF1-203ENST00000398137 VEPH1Q14D04 833 aa26.87■■□□□ 1.89
U2AF1-203ENST00000398137 CACNA2D4Q7Z3S7 1137 aa26.87■■□□□ 1.89
U2AF1-203ENST00000398137 OSBPL6Q9BZF3 934 aa26.87■■□□□ 1.89
U2AF1-203ENST00000398137 DMAP1Q9NPF5 467 aaPredicted RBP26.87■■□□□ 1.89
U2AF1-203ENST00000398137 KIAA1257Q9ULG3 409 aa26.87■■□□□ 1.89
U2AF1-203ENST00000398137 TRIM66O15016 1216 aa26.86■■□□□ 1.89
U2AF1-203ENST00000398137 GNA15P30679 374 aa26.86■■□□□ 1.89
U2AF1-203ENST00000398137 GDI1P31150 447 aa26.86■■□□□ 1.89
U2AF1-203ENST00000398137 TMEM150AQ86TG1 271 aa26.86■■□□□ 1.89
U2AF1-203ENST00000398137 C1orf210Q8IVY1 113 aa26.86■■□□□ 1.89
U2AF1-203ENST00000398137 MFSD6LQ8IWD5 586 aa26.86■■□□□ 1.89
U2AF1-203ENST00000398137 SMOQ99835 787 aa26.86■■□□□ 1.89
U2AF1-203ENST00000398137 TRIM5Q9C035 493 aa26.86■■□□□ 1.89
U2AF1-203ENST00000398137 BRD9Q9H8M2 597 aa26.86■■□□□ 1.89
U2AF1-203ENST00000398137 TSPAN16Q9UKR8 245 aa26.86■■□□□ 1.89
U2AF1-203ENST00000398137 F5P12259 2224 aa26.85■■□□□ 1.89
U2AF1-203ENST00000398137 THAP12O43422 761 aa26.85■■□□□ 1.89
U2AF1-203ENST00000398137 GFPT2O94808 682 aa26.85■■□□□ 1.89
U2AF1-203ENST00000398137 HMGA1P17096 107 aaKnown RBP26.85■■□□□ 1.89
U2AF1-203ENST00000398137 CLCN1P35523 988 aa26.85■■□□□ 1.89
U2AF1-203ENST00000398137 SOX5P35711 763 aa26.85■■□□□ 1.89
U2AF1-203ENST00000398137 MAP3K7CLP57077 242 aa26.85■■□□□ 1.89
U2AF1-203ENST00000398137 ARID3BQ8IVW6 561 aaPredicted RBP26.85■■□□□ 1.89
U2AF1-203ENST00000398137 DEPDC1BQ8WUY9 529 aa26.85■■□□□ 1.89
U2AF1-203ENST00000398137 CLDN23Q96B33 292 aa26.85■■□□□ 1.89
U2AF1-203ENST00000398137 C8orf48Q96LL4 319 aa26.85■■□□□ 1.89
U2AF1-203ENST00000398137 KCNK16Q96T55 309 aa26.85■■□□□ 1.89
U2AF1-203ENST00000398137 ATXN3LQ9H3M9 355 aa26.85■■□□□ 1.89
U2AF1-203ENST00000398137 SLITRK6Q9H5Y7 841 aa26.85■■□□□ 1.89
U2AF1-203ENST00000398137 TRPV5Q9NQA5 729 aa26.85■■□□□ 1.89
U2AF1-203ENST00000398137 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.85■■□□□ 1.89
U2AF1-203ENST00000398137 BEST1O76090 585 aa26.84■■□□□ 1.89
U2AF1-203ENST00000398137 STAT1P42224 750 aa26.84■■□□□ 1.89
U2AF1-203ENST00000398137 CYP4F8P98187 520 aa26.84■■□□□ 1.89
U2AF1-203ENST00000398137 SMYD5Q6GMV2 418 aa26.84■■□□□ 1.89
U2AF1-203ENST00000398137 CLEC20AQ6ZU45 233 aa26.84■■□□□ 1.89
U2AF1-203ENST00000398137 ITIH5Q86UX2 942 aa26.84■■□□□ 1.89
U2AF1-203ENST00000398137 SLC47A2Q86VL8 602 aa26.84■■□□□ 1.89
U2AF1-203ENST00000398137 TTC30AQ86WT1 665 aa26.84■■□□□ 1.89
U2AF1-203ENST00000398137 ZMIZ2Q8NF64 920 aa26.84■■□□□ 1.89
U2AF1-203ENST00000398137 BAP1Q92560 729 aa26.84■■□□□ 1.89
U2AF1-203ENST00000398137 TTYH3Q9C0H2 523 aa26.84■■□□□ 1.89
U2AF1-203ENST00000398137 HESX1Q9UBX0 185 aa26.84■■□□□ 1.89
U2AF1-203ENST00000398137 KIF26AQ9ULI4 1882 aaPredicted RBP26.84■■□□□ 1.89
U2AF1-203ENST00000398137 SLC38A8A6NNN8 435 aa26.83■■□□□ 1.89
U2AF1-203ENST00000398137 M0QYV0 167 aa26.83■■□□□ 1.89
U2AF1-203ENST00000398137 PRAMEF12O95522 483 aa26.83■■□□□ 1.89
U2AF1-203ENST00000398137 PTK2Q05397 1052 aa26.83■■□□□ 1.89
U2AF1-203ENST00000398137 FCHO2Q0JRZ9 810 aa26.83■■□□□ 1.89
U2AF1-203ENST00000398137 TAF12Q16514 161 aa26.83■■□□□ 1.89
U2AF1-203ENST00000398137 GPR158Q5T848 1215 aa26.83■■□□□ 1.89
U2AF1-203ENST00000398137 LCLAT1Q6UWP7 414 aa26.83■■□□□ 1.89
U2AF1-203ENST00000398137 IRF7Q92985 503 aa26.83■■□□□ 1.89
U2AF1-203ENST00000398137 SPATA17Q96L03 361 aa26.83■■□□□ 1.89
U2AF1-203ENST00000398137 DUSP16Q9BY84 665 aa26.83■■□□□ 1.89
U2AF1-203ENST00000398137 CSNK1G1Q9HCP0 422 aa26.83■■□□□ 1.89
U2AF1-203ENST00000398137 SP9P0CG40 484 aa26.82■■□□□ 1.88
U2AF1-203ENST00000398137 BCAT1P54687 386 aa26.82■■□□□ 1.88
U2AF1-203ENST00000398137 STILQ15468 1287 aa26.82■■□□□ 1.88
U2AF1-203ENST00000398137 CNGA2Q16280 664 aa26.82■■□□□ 1.88
U2AF1-203ENST00000398137 FIGNQ5HY92 759 aa26.82■■□□□ 1.88
U2AF1-203ENST00000398137 ANKRD52Q8NB46 1076 aa26.82■■□□□ 1.88
U2AF1-203ENST00000398137 UBA3Q8TBC4 463 aa26.82■■□□□ 1.88
U2AF1-203ENST00000398137 ITIH6Q6UXX5 1313 aa26.82■■□□□ 1.88
U2AF1-203ENST00000398137 GREB1Q4ZG55 1949 aa26.81■■□□□ 1.88
U2AF1-203ENST00000398137 MED7O43513 233 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms