RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 ROR1Q01973 937 aa15.6■□□□□ 0.09
TM9SF1-202ENST00000396854 PPP2R2DQ66LE6 453 aa15.6■□□□□ 0.09
TM9SF1-202ENST00000396854 CLEC20AQ6ZU45 233 aa15.6■□□□□ 0.09
TM9SF1-202ENST00000396854 SPATA2LQ8IUW3 424 aaPredicted RBP15.6■□□□□ 0.09
TM9SF1-202ENST00000396854 C2orf15Q8WU43 125 aaKnown RBP15.6■□□□□ 0.09
TM9SF1-202ENST00000396854 SLC35F5Q8WV83 523 aa15.6■□□□□ 0.09
TM9SF1-202ENST00000396854 CPA5Q8WXQ8 436 aa15.6■□□□□ 0.09
TM9SF1-202ENST00000396854 CSNK1G1Q9HCP0 422 aa15.6■□□□□ 0.09
TM9SF1-202ENST00000396854 KRT82Q9NSB4 513 aa15.6■□□□□ 0.09
TM9SF1-202ENST00000396854 CYTH4Q9UIA0 394 aa15.6■□□□□ 0.09
TM9SF1-202ENST00000396854 MTUS1Q9ULD2 1270 aa15.6■□□□□ 0.09
TM9SF1-202ENST00000396854 GREB1Q4ZG55 1949 aa15.6■□□□□ 0.09
TM9SF1-202ENST00000396854 WDR27A2RRH5 827 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 TMCO5BA8MYB1 307 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 H3BNC9 293 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 ADAM12O43184 909 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 FTLP02792 175 aaPredicted RBP15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 DNAJB2P25686 324 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 GALCP54803 685 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 GUCY2DQ02846 1103 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 PDE4CQ08493 712 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 RPS6KA1Q15418 735 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 MON1BQ7L1V2 547 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 LRRC57Q8N9N7 239 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 STK32AQ8WU08 396 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 PBKQ96KB5 322 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 RASSF4Q9H2L5 321 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 EPB41L5Q9HCM4 733 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 TLR9Q9NR96 1032 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 PACSIN2Q9UNF0 486 aaPredicted RBP15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 CHD7Q9P2D1 2997 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 MTCL1Q9Y4B5 1905 aaKnown RBP15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 A0A1W2PPC1 479 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 MTMR11A4FU01 709 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 ANKRD62A6NC57 917 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 FSCN2O14926 492 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 XPO1O14980 1071 aaKnown RBP15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 RPL17P18621 184 aaKnown RBP15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 MMP8P22894 467 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 DNAJB1P25685 340 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 OR1D2P34982 312 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 RPL34P49207 117 aaKnown RBP15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 IRAK1P51617 712 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 SLC8A3P57103 927 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 ERVFC1P60507 584 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 SKOR1P84550 965 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 PDCLQ13371 301 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 RAB33AQ14088 237 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 TTMPQ5BVD1 217 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 TMC7Q7Z402 723 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 EIF1ADQ8N9N8 165 aaKnown RBP15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 SPPL2BQ8TCT7 592 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 AUTS2Q8WXX7 1259 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 VCPIP1Q96JH7 1222 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 ZIM3Q96PE6 472 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 KRT12Q99456 494 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 TCF25Q9BQ70 676 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 CAPS2Q9BXY5 557 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 CYLDQ9NQC7 956 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 RSPH14Q9UHP6 348 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 NFU1Q9UMS0 254 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 PCDHB5Q9Y5E4 795 aa15.59■□□□□ 0.09
TM9SF1-202ENST00000396854 A6NNZ2 444 aa15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 GRM6O15303 877 aa15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 AP1G2O75843 785 aa15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 VNN2O95498 520 aa15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 BDNFP23560 247 aa15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 MAGEA11P43364 429 aa15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 NDUFV1P49821 464 aa15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 DNA2P51530 1060 aa15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 C1QBPQ07021 282 aaKnown RBP15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 PTP4A2Q12974 167 aa15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 GPM6BQ13491 265 aa15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 CAMK1Q14012 370 aa15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 TUBB8Q3ZCM7 444 aa15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 PTPN20Q4JDL3 420 aa15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 TPGS2Q68CL5 300 aa15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 VSTM1Q6UX27 236 aa15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 RNF19BQ6ZMZ0 732 aa15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 DNAAF5Q86Y56 855 aa15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 MCOLN2Q8IZK6 566 aa15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 IQCKQ8N0W5 287 aa15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 ZMIZ2Q8NF64 920 aa15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 ACTRT1Q8TDG2 376 aa15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 CASKIN2Q8WXE0 1202 aa15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 RFFLQ8WZ73 363 aa15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 SMOQ99835 787 aa15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 SLC28A3Q9HAS3 691 aa15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 NGRNQ9NPE2 291 aaKnown RBP15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 ENTPD7Q9NQZ7 604 aa15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 TMEM30AQ9NV96 361 aa15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 ABI2Q9NYB9 513 aaPredicted RBP15.58■□□□□ 0.09
TM9SF1-202ENST00000396854 ZSCAN5CA6NGD5 496 aaPredicted RBP15.58■□□□□ 0.08
TM9SF1-202ENST00000396854 TRIM66O15016 1216 aa15.58■□□□□ 0.08
TM9SF1-202ENST00000396854 BEST1O76090 585 aa15.58■□□□□ 0.08
TM9SF1-202ENST00000396854 ABLIM3O94929 683 aa15.58■□□□□ 0.08
TM9SF1-202ENST00000396854 FAM153BP0C7A2 387 aa15.58■□□□□ 0.08
TM9SF1-202ENST00000396854 GABRB2P47870 512 aa15.58■□□□□ 0.08
TM9SF1-202ENST00000396854 CACNA2D1P54289 1103 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms