RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 PHBP35232 272 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 DYDC1Q8WWB3 177 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 ARHGEF2Q92974 986 aaKnown RBP16.86■□□□□ 0.29
SNX6-202ENST00000396526 RNF157Q96PX1 679 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 FAM107AO95990 144 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 CYBAP13498 195 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 CCDC130P13994 396 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 LHX1P48742 406 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 FLT3LGP49771 235 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 HIF1AQ16665 826 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 DSTYKQ6XUX3 929 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 PDIK1LQ8N165 341 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 B3GALNT2Q8NCR0 500 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 FAM149B1Q96BN6 582 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 DPEP3Q9H4B8 488 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.86■□□□□ 0.29
SNX6-202ENST00000396526 MDM4O15151 490 aa16.85■□□□□ 0.29
SNX6-202ENST00000396526 TP73O15350 636 aa16.85■□□□□ 0.29
SNX6-202ENST00000396526 KIAA0754O94854 1291 aa16.85■□□□□ 0.29
SNX6-202ENST00000396526 CD48P09326 243 aa16.85■□□□□ 0.29
SNX6-202ENST00000396526 CTSHP09668 335 aa16.85■□□□□ 0.29
SNX6-202ENST00000396526 PECAM1P16284 738 aaPredicted RBP16.85■□□□□ 0.29
SNX6-202ENST00000396526 TGM2P21980 687 aa16.85■□□□□ 0.29
SNX6-202ENST00000396526 CTCFP49711 727 aaPredicted RBP16.85■□□□□ 0.29
SNX6-202ENST00000396526 NR1H3Q13133 447 aa16.85■□□□□ 0.29
SNX6-202ENST00000396526 CPLX4Q7Z7G2 160 aa16.85■□□□□ 0.29
SNX6-202ENST00000396526 TMEM86AQ8N2M4 240 aa16.85■□□□□ 0.29
SNX6-202ENST00000396526 KBTBD7Q8WVZ9 684 aa16.85■□□□□ 0.29
SNX6-202ENST00000396526 CCT8L2Q96SF2 557 aa16.85■□□□□ 0.29
SNX6-202ENST00000396526 VPS37BQ9H9H4 285 aa16.85■□□□□ 0.29
SNX6-202ENST00000396526 SAE1Q9UBE0 346 aaPredicted RBP16.85■□□□□ 0.29
SNX6-202ENST00000396526 GIT1Q9Y2X7 761 aa16.85■□□□□ 0.29
SNX6-202ENST00000396526 TULP2O00295 520 aa16.85■□□□□ 0.29
SNX6-202ENST00000396526 XPO1O14980 1071 aaKnown RBP16.85■□□□□ 0.29
SNX6-202ENST00000396526 MMP13P45452 471 aa16.85■□□□□ 0.29
SNX6-202ENST00000396526 ERMARDQ5T6L9 678 aa16.85■□□□□ 0.29
SNX6-202ENST00000396526 HNRNPABQ99729 332 aaKnown RBP16.85■□□□□ 0.29
SNX6-202ENST00000396526 FERMT1Q9BQL6 677 aa16.85■□□□□ 0.29
SNX6-202ENST00000396526 PHACTR1Q9C0D0 580 aa16.85■□□□□ 0.29
SNX6-202ENST00000396526 GOLGA2P5Q9HBQ8 144 aa16.85■□□□□ 0.29
SNX6-202ENST00000396526 XPNPEP3Q9NQH7 507 aa16.85■□□□□ 0.29
SNX6-202ENST00000396526 ENDOD1O94919 500 aa16.85■□□□□ 0.29
SNX6-202ENST00000396526 ETS1P14921 441 aa16.85■□□□□ 0.29
SNX6-202ENST00000396526 LMO2P25791 158 aa16.85■□□□□ 0.29
SNX6-202ENST00000396526 PRUNE1Q86TP1 453 aa16.85■□□□□ 0.29
SNX6-202ENST00000396526 SIX6OS1Q8N1H7 587 aa16.85■□□□□ 0.29
SNX6-202ENST00000396526 MGAMO43451 1857 aa16.84■□□□□ 0.29
SNX6-202ENST00000396526 EXOC1LA0A1B0GW35 172 aa16.84■□□□□ 0.29
SNX6-202ENST00000396526 SPTLC1O15269 473 aa16.84■□□□□ 0.29
SNX6-202ENST00000396526 RAB27AP51159 221 aa16.84■□□□□ 0.29
SNX6-202ENST00000396526 IFI35P80217 286 aaPredicted RBP16.84■□□□□ 0.29
SNX6-202ENST00000396526 DPYSL3Q14195 570 aa16.84■□□□□ 0.29
SNX6-202ENST00000396526 PPP6R3Q5H9R7 873 aaPredicted RBP16.84■□□□□ 0.29
SNX6-202ENST00000396526 RNASEH2BQ5TBB1 312 aaKnown RBP16.84■□□□□ 0.29
SNX6-202ENST00000396526 PCSK9Q8NBP7 692 aaKnown RBP16.84■□□□□ 0.29
SNX6-202ENST00000396526 ZNF670Q9BS34 389 aa16.84■□□□□ 0.29
SNX6-202ENST00000396526 UPF3AQ9H1J1 476 aaKnown RBP16.84■□□□□ 0.29
SNX6-202ENST00000396526 ADAM7Q9H2U9 754 aa16.84■□□□□ 0.29
SNX6-202ENST00000396526 STAP1Q9ULZ2 295 aa16.84■□□□□ 0.29
SNX6-202ENST00000396526 SCN1AP35498 2009 aa16.84■□□□□ 0.29
SNX6-202ENST00000396526 DCDC2CA8MYV0 355 aa16.84■□□□□ 0.29
SNX6-202ENST00000396526 FGFR1P11362 822 aa16.84■□□□□ 0.29
SNX6-202ENST00000396526 PTPN1P18031 435 aaKnown RBP16.84■□□□□ 0.29
SNX6-202ENST00000396526 SOX4Q06945 474 aaPredicted RBP16.84■□□□□ 0.29
SNX6-202ENST00000396526 PDIA2Q13087 525 aaKnown RBP16.84■□□□□ 0.29
SNX6-202ENST00000396526 NOMO1Q15155 1222 aa16.84■□□□□ 0.29
SNX6-202ENST00000396526 TAF5Q15542 800 aa16.84■□□□□ 0.29
SNX6-202ENST00000396526 C4orf22Q6V702 233 aa16.84■□□□□ 0.29
SNX6-202ENST00000396526 BZW1Q7L1Q6 419 aaKnown RBP16.84■□□□□ 0.29
SNX6-202ENST00000396526 FAM71DQ8N9W8 422 aa16.84■□□□□ 0.29
SNX6-202ENST00000396526 PYROXD1Q8WU10 500 aa16.84■□□□□ 0.29
SNX6-202ENST00000396526 XPO6Q96QU8 1125 aaKnown RBP16.84■□□□□ 0.29
SNX6-202ENST00000396526 DUSP16Q9BY84 665 aa16.84■□□□□ 0.29
SNX6-202ENST00000396526 MYADML2A6NDP7 307 aa16.83■□□□□ 0.29
SNX6-202ENST00000396526 ZNF487B1APH4 448 aa16.83■□□□□ 0.29
SNX6-202ENST00000396526 ALOX15BO15296 676 aa16.83■□□□□ 0.29
SNX6-202ENST00000396526 TOMM70O94826 608 aa16.83■□□□□ 0.29
SNX6-202ENST00000396526 IGHA2P01877 340 aa16.83■□□□□ 0.29
SNX6-202ENST00000396526 RPL9P32969 192 aaKnown RBP16.83■□□□□ 0.29
SNX6-202ENST00000396526 BASP1P80723 227 aaKnown RBP16.83■□□□□ 0.29
SNX6-202ENST00000396526 SH3PXD2AQ5TCZ1 1133 aa16.83■□□□□ 0.29
SNX6-202ENST00000396526 SERINC5Q86VE9 423 aa16.83■□□□□ 0.29
SNX6-202ENST00000396526 ZC3H18Q86VM9 953 aaKnown RBP16.83■□□□□ 0.29
SNX6-202ENST00000396526 ZBED8Q8IZ13 594 aa16.83■□□□□ 0.29
SNX6-202ENST00000396526 MYCBPAPQ8TBZ2 947 aa16.83■□□□□ 0.29
SNX6-202ENST00000396526 PEBP4Q96S96 227 aa16.83■□□□□ 0.29
SNX6-202ENST00000396526 GAD1Q99259 594 aa16.83■□□□□ 0.29
SNX6-202ENST00000396526 B3GNT5Q9BYG0 378 aa16.83■□□□□ 0.29
SNX6-202ENST00000396526 KCNK9Q9NPC2 374 aa16.83■□□□□ 0.29
SNX6-202ENST00000396526 PAK5Q9P286 719 aa16.83■□□□□ 0.29
SNX6-202ENST00000396526 ARHGEF37A1IGU5 675 aa16.83■□□□□ 0.28
SNX6-202ENST00000396526 TRAPPC3O43617 180 aa16.83■□□□□ 0.28
SNX6-202ENST00000396526 ZBED1O96006 694 aa16.83■□□□□ 0.28
SNX6-202ENST00000396526 CHN1P15882 459 aa16.83■□□□□ 0.28
SNX6-202ENST00000396526 ARL4AP40617 200 aa16.83■□□□□ 0.28
SNX6-202ENST00000396526 GDF6Q6KF10 455 aaPredicted RBP16.83■□□□□ 0.28
SNX6-202ENST00000396526 RPAINQ86UA6 219 aa16.83■□□□□ 0.28
SNX6-202ENST00000396526 GLIS1Q8NBF1 620 aa16.83■□□□□ 0.28
SNX6-202ENST00000396526 TRPV1Q8NER1 839 aa16.83■□□□□ 0.28
SNX6-202ENST00000396526 TRIB2Q92519 343 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms