RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 RPL22P35268 128 aaKnown RBP15.76■□□□□ 0.11
GPC3-202ENST00000394299 HDAC4P56524 1084 aa15.76■□□□□ 0.11
GPC3-202ENST00000394299 EIF3EP60228 445 aaKnown RBP15.76■□□□□ 0.11
GPC3-202ENST00000394299 CACNB2Q08289 660 aaPredicted RBP15.76■□□□□ 0.11
GPC3-202ENST00000394299 ACAP1Q15027 740 aa15.76■□□□□ 0.11
GPC3-202ENST00000394299 RNASEH2BQ5TBB1 312 aaKnown RBP15.76■□□□□ 0.11
GPC3-202ENST00000394299 ARHGAP17Q68EM7 881 aa15.76■□□□□ 0.11
GPC3-202ENST00000394299 ZCCHC9Q8N567 271 aaKnown RBP15.76■□□□□ 0.11
GPC3-202ENST00000394299 SPATA18Q8TC71 538 aa15.76■□□□□ 0.11
GPC3-202ENST00000394299 CYB561D2O14569 222 aa15.76■□□□□ 0.11
GPC3-202ENST00000394299 PIAS1O75925 651 aa15.76■□□□□ 0.11
GPC3-202ENST00000394299 ENDOD1O94919 500 aa15.76■□□□□ 0.11
GPC3-202ENST00000394299 RBP3P10745 1247 aa15.76■□□□□ 0.11
GPC3-202ENST00000394299 ELNP15502 786 aa15.76■□□□□ 0.11
GPC3-202ENST00000394299 CHN1P15882 459 aa15.76■□□□□ 0.11
GPC3-202ENST00000394299 TAF2Q6P1X5 1199 aa15.76■□□□□ 0.11
GPC3-202ENST00000394299 EXOC3L1Q86VI1 746 aa15.76■□□□□ 0.11
GPC3-202ENST00000394299 ZNF560Q96MR9 790 aa15.76■□□□□ 0.11
GPC3-202ENST00000394299 PPP1R10Q96QC0 940 aaKnown RBP15.76■□□□□ 0.11
GPC3-202ENST00000394299 TMEM109Q9BVC6 243 aa15.76■□□□□ 0.11
GPC3-202ENST00000394299 MAK16Q9BXY0 300 aaKnown RBP15.76■□□□□ 0.11
GPC3-202ENST00000394299 FAM105AQ9NUU6 356 aa15.76■□□□□ 0.11
GPC3-202ENST00000394299 EFR3BQ9Y2G0 817 aa15.76■□□□□ 0.11
GPC3-202ENST00000394299 TLL2Q9Y6L7 1015 aa15.76■□□□□ 0.11
GPC3-202ENST00000394299 NDUFV1P49821 464 aa15.75■□□□□ 0.11
GPC3-202ENST00000394299 ADCY1Q08828 1119 aa15.75■□□□□ 0.11
GPC3-202ENST00000394299 BST2Q10589 180 aaKnown RBP15.75■□□□□ 0.11
GPC3-202ENST00000394299 SF3A3Q12874 501 aaKnown RBP eCLIP15.75■□□□□ 0.112e-9■■■■■ 30.3
GPC3-202ENST00000394299 PPP6R3Q5H9R7 873 aaPredicted RBP15.75■□□□□ 0.11
GPC3-202ENST00000394299 SMYD5Q6GMV2 418 aa15.75■□□□□ 0.11
GPC3-202ENST00000394299 NLRP14Q86W24 1093 aa15.75■□□□□ 0.11
GPC3-202ENST00000394299 RNF169Q8NCN4 708 aa15.75■□□□□ 0.11
GPC3-202ENST00000394299 BBOF1Q8ND07 529 aa15.75■□□□□ 0.11
GPC3-202ENST00000394299 C3orf58Q8NDZ4 430 aa15.75■□□□□ 0.11
GPC3-202ENST00000394299 RSAD2Q8WXG1 361 aa15.75■□□□□ 0.11
GPC3-202ENST00000394299 CCT8L2Q96SF2 557 aa15.75■□□□□ 0.11
GPC3-202ENST00000394299 SNRNP25Q9BV90 132 aaKnown RBP15.75■□□□□ 0.11
GPC3-202ENST00000394299 APOC4-APOC2K7ER74 178 aa15.75■□□□□ 0.11
GPC3-202ENST00000394299 APOC2P02655 101 aa15.75■□□□□ 0.11
GPC3-202ENST00000394299 ASGR1P07306 291 aa15.75■□□□□ 0.11
GPC3-202ENST00000394299 CTCFP49711 727 aaPredicted RBP15.75■□□□□ 0.11
GPC3-202ENST00000394299 CLCNKBP51801 687 aa15.75■□□□□ 0.11
GPC3-202ENST00000394299 PITX1P78337 314 aaPredicted RBP15.75■□□□□ 0.11
GPC3-202ENST00000394299 KRT81Q14533 505 aa15.75■□□□□ 0.11
GPC3-202ENST00000394299 MSS51Q4VC12 460 aa15.75■□□□□ 0.11
GPC3-202ENST00000394299 TNFAIP8L3Q5GJ75 292 aa15.75■□□□□ 0.11
GPC3-202ENST00000394299 PAQR9Q6ZVX9 377 aa15.75■□□□□ 0.11
GPC3-202ENST00000394299 ANKMY2Q8IV38 441 aa15.75■□□□□ 0.11
GPC3-202ENST00000394299 CCDC13Q8IYE1 715 aa15.75■□□□□ 0.11
GPC3-202ENST00000394299 FUKQ8N0W3 1084 aa15.75■□□□□ 0.11
GPC3-202ENST00000394299 B3GALNT2Q8NCR0 500 aa15.75■□□□□ 0.11
GPC3-202ENST00000394299 MRRFQ96E11 262 aaKnown RBP15.75■□□□□ 0.11
GPC3-202ENST00000394299 TSPYL2Q9H2G4 693 aaPredicted RBP15.75■□□□□ 0.11
GPC3-202ENST00000394299 FAM124BQ9H5Z6 455 aaPredicted RBP15.75■□□□□ 0.11
GPC3-202ENST00000394299 RSAD1Q9HA92 442 aa15.75■□□□□ 0.11
GPC3-202ENST00000394299 PCDH9Q9HC56 1237 aa15.75■□□□□ 0.11
GPC3-202ENST00000394299 HEY1Q9Y5J3 304 aa15.75■□□□□ 0.11
GPC3-202ENST00000394299 TRPV2Q9Y5S1 764 aa15.75■□□□□ 0.11
GPC3-202ENST00000394299 RALGAPA2Q2PPJ7 1873 aa15.74■□□□□ 0.11
GPC3-202ENST00000394299 I3L4J1 428 aa15.74■□□□□ 0.11
GPC3-202ENST00000394299 M0QZ92 97 aa15.74■□□□□ 0.11
GPC3-202ENST00000394299 MMP13P45452 471 aa15.74■□□□□ 0.11
GPC3-202ENST00000394299 TM4SF4P48230 202 aa15.74■□□□□ 0.11
GPC3-202ENST00000394299 SREBF2Q12772 1141 aa15.74■□□□□ 0.11
GPC3-202ENST00000394299 KCNA10Q16322 511 aa15.74■□□□□ 0.11
GPC3-202ENST00000394299 QPCTQ16769 361 aa15.74■□□□□ 0.11
GPC3-202ENST00000394299 SV2CQ496J9 727 aa15.74■□□□□ 0.11
GPC3-202ENST00000394299 MFSD14CQ5VZR4 134 aa15.74■□□□□ 0.11
GPC3-202ENST00000394299 LIMS2Q7Z4I7 341 aa15.74■□□□□ 0.11
GPC3-202ENST00000394299 CTU1Q7Z7A3 348 aaKnown RBP15.74■□□□□ 0.11
GPC3-202ENST00000394299 PIGZQ86VD9 579 aa15.74■□□□□ 0.11
GPC3-202ENST00000394299 PQLC3Q8N755 202 aa15.74■□□□□ 0.11
GPC3-202ENST00000394299 MYCBPAPQ8TBZ2 947 aa15.74■□□□□ 0.11
GPC3-202ENST00000394299 CPT1BQ92523 772 aa15.74■□□□□ 0.11
GPC3-202ENST00000394299 PRCCQ92733 491 aaPredicted RBP15.74■□□□□ 0.11
GPC3-202ENST00000394299 RNF157Q96PX1 679 aa15.74■□□□□ 0.11
GPC3-202ENST00000394299 PCDH18Q9HCL0 1135 aa15.74■□□□□ 0.11
GPC3-202ENST00000394299 TMPRSS4Q9NRS4 437 aa15.74■□□□□ 0.11
GPC3-202ENST00000394299 CASTOR2A6NHX0 329 aa15.73■□□□□ 0.11
GPC3-202ENST00000394299 XPOTO43592 962 aaKnown RBP15.73■□□□□ 0.11
GPC3-202ENST00000394299 MGEA5O60502 916 aa15.73■□□□□ 0.11
GPC3-202ENST00000394299 AGTP01019 485 aa15.73■□□□□ 0.11
GPC3-202ENST00000394299 THPOP40225 353 aa15.73■□□□□ 0.11
GPC3-202ENST00000394299 SCNN1GP51170 649 aa15.73■□□□□ 0.11
GPC3-202ENST00000394299 BCAT1P54687 386 aa15.73■□□□□ 0.11
GPC3-202ENST00000394299 FCGRTP55899 365 aa15.73■□□□□ 0.11
GPC3-202ENST00000394299 PAN2Q504Q3 1202 aaKnown RBP15.73■□□□□ 0.11
GPC3-202ENST00000394299 FNBP1LQ5T0N5 605 aa15.73■□□□□ 0.11
GPC3-202ENST00000394299 DARS2Q6PI48 645 aaKnown RBP15.73■□□□□ 0.11
GPC3-202ENST00000394299 ZBED8Q8IZ13 594 aa15.73■□□□□ 0.11
GPC3-202ENST00000394299 NETO2Q8NC67 525 aa15.73■□□□□ 0.11
GPC3-202ENST00000394299 PCDH19Q8TAB3 1148 aa15.73■□□□□ 0.11
GPC3-202ENST00000394299 ZNF473Q8WTR7 871 aaKnown RBP15.73■□□□□ 0.11
GPC3-202ENST00000394299 SENP6Q9GZR1 1112 aaPredicted RBP15.73■□□□□ 0.11
GPC3-202ENST00000394299 CWC15Q9P013 229 aaKnown RBP15.73■□□□□ 0.11
GPC3-202ENST00000394299 SYNJ2BP-COX16A0A087WUM0 186 aa15.73■□□□□ 0.11
GPC3-202ENST00000394299 SETSIPP0DME0 302 aa15.73■□□□□ 0.11
GPC3-202ENST00000394299 GHRP10912 638 aa15.73■□□□□ 0.11
GPC3-202ENST00000394299 CD52P31358 61 aa15.73■□□□□ 0.11
GPC3-202ENST00000394299 PNPLA4P41247 253 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms