RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 ADAMTS5Q9UNA0 930 aa13.03□□□□□ -0.32
CDX2-201ENST00000381020 CLDN5O00501 218 aa13.02□□□□□ -0.32
CDX2-201ENST00000381020 MLH1P40692 756 aa13.02□□□□□ -0.32
CDX2-201ENST00000381020 ZNF572Q7Z3I7 529 aaPredicted RBP13.02□□□□□ -0.32
CDX2-201ENST00000381020 EIF1ADQ8N9N8 165 aaKnown RBP13.02□□□□□ -0.32
CDX2-201ENST00000381020 NDRG1Q92597 394 aaKnown RBP13.02□□□□□ -0.32
CDX2-201ENST00000381020 LBHD1Q9BQE6 289 aaPredicted RBP13.02□□□□□ -0.32
CDX2-201ENST00000381020 BEGAINQ9BUH8 593 aa13.02□□□□□ -0.32
CDX2-201ENST00000381020 MARCOQ9UEW3 520 aaPredicted RBP13.02□□□□□ -0.32
CDX2-201ENST00000381020 TSPAN1O60635 241 aa13.02□□□□□ -0.33
CDX2-201ENST00000381020 LRCH4O75427 683 aa13.02□□□□□ -0.33
CDX2-201ENST00000381020 UPP2O95045 317 aa13.02□□□□□ -0.33
CDX2-201ENST00000381020 ATG7O95352 703 aa13.02□□□□□ -0.33
CDX2-201ENST00000381020 CPB1P15086 417 aa13.02□□□□□ -0.33
CDX2-201ENST00000381020 CYP2F1P24903 491 aa13.02□□□□□ -0.33
CDX2-201ENST00000381020 RBL1P28749 1068 aa13.02□□□□□ -0.33
CDX2-201ENST00000381020 PCSK1P29120 753 aa13.02□□□□□ -0.33
CDX2-201ENST00000381020 GARSP41250 739 aaKnown RBP13.02□□□□□ -0.33
CDX2-201ENST00000381020 NXNQ6DKJ4 435 aa13.02□□□□□ -0.33
CDX2-201ENST00000381020 SPATA2LQ8IUW3 424 aaPredicted RBP13.02□□□□□ -0.33
CDX2-201ENST00000381020 STMN2Q93045 179 aa13.02□□□□□ -0.33
CDX2-201ENST00000381020 ABI2Q9NYB9 513 aaPredicted RBP13.02□□□□□ -0.33
CDX2-201ENST00000381020 PGAP2Q9UHJ9 254 aa13.02□□□□□ -0.33
CDX2-201ENST00000381020 NUDT5Q9UKK9 219 aa13.02□□□□□ -0.33
CDX2-201ENST00000381020 hCG_1818297A0A087WSY0 165 aa13.02□□□□□ -0.33
CDX2-201ENST00000381020 KCNK1O00180 336 aa13.02□□□□□ -0.33
CDX2-201ENST00000381020 ELK3P41970 407 aa13.02□□□□□ -0.33
CDX2-201ENST00000381020 RASSF2P50749 326 aa13.02□□□□□ -0.33
CDX2-201ENST00000381020 SLC6A3Q01959 620 aa13.02□□□□□ -0.33
CDX2-201ENST00000381020 AUHQ13825 339 aaKnown RBP13.02□□□□□ -0.33
CDX2-201ENST00000381020 TARBP2Q15633 366 aaKnown RBP13.02□□□□□ -0.33
CDX2-201ENST00000381020 FAM110CQ1W6H9 321 aa13.02□□□□□ -0.33
CDX2-201ENST00000381020 DCLK2Q8N568 766 aa13.02□□□□□ -0.33
CDX2-201ENST00000381020 DDX1Q92499 740 aaKnown RBP13.02□□□□□ -0.33
CDX2-201ENST00000381020 ART4Q93070 314 aa13.02□□□□□ -0.33
CDX2-201ENST00000381020 FOXP3Q9BZS1 431 aa13.02□□□□□ -0.33
CDX2-201ENST00000381020 FIS1Q9Y3D6 152 aa13.02□□□□□ -0.33
CDX2-201ENST00000381020 PMM2O15305 246 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 AKR1A1P14550 325 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 OVGP1Q12889 678 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 SLC4A11Q8NBS3 891 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 LRRC37BQ96QE4 947 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 ACTR5Q9H9F9 607 aaPredicted RBP13.01□□□□□ -0.33
CDX2-201ENST00000381020 ZFATQ9P243 1243 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 CACNG4Q9UBN1 327 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 TMEM59LQ9UK28 342 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 C2CD2Q9Y426 696 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 CNTNAP2Q9UHC6 1331 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 ERFP50548 548 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 SCNN1GP51170 649 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 GEMIN4P57678 1058 aaKnown RBP13.01□□□□□ -0.33
CDX2-201ENST00000381020 SKOR1P84550 965 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 CCL14Q16627 93 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 SH3PXD2AQ5TCZ1 1133 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 SPRYD7Q5W111 196 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 GLB1LQ6UWU2 654 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 AGR3Q8TD06 166 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 EPAS1Q99814 870 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 TRIM55Q9BYV6 548 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 NPHS2Q9NP85 383 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 PCMTD2Q9NV79 361 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 USP15Q9Y4E8 981 aaPredicted RBP13.01□□□□□ -0.33
CDX2-201ENST00000381020 SLC15A5A6NIM6 579 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 TRIM49D1C9J1S8 452 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 PPP1R12AO14974 1030 aaPredicted RBP13.01□□□□□ -0.33
CDX2-201ENST00000381020 CILPO75339 1184 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 TADA2AO75478 443 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 TYK2P29597 1187 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 PKN2Q16513 984 aaKnown RBP13.01□□□□□ -0.33
CDX2-201ENST00000381020 GLT1D1Q96MS3 346 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 ETNK1Q9HBU6 452 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 TLK1Q9UKI8 766 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 ATP8B3O60423 1300 aa13.01□□□□□ -0.33
CDX2-201ENST00000381020 ARHGAP42A6NI28 874 aa13□□□□□ -0.33
CDX2-201ENST00000381020 PIGRP01833 764 aa13□□□□□ -0.33
CDX2-201ENST00000381020 RPL22P35268 128 aaKnown RBP13□□□□□ -0.33
CDX2-201ENST00000381020 PTGIRP43119 386 aa13□□□□□ -0.33
CDX2-201ENST00000381020 NRLP54845 237 aa13□□□□□ -0.33
CDX2-201ENST00000381020 FCGRTP55899 365 aa13□□□□□ -0.33
CDX2-201ENST00000381020 ACTN3Q08043 901 aaPredicted RBP13□□□□□ -0.33
CDX2-201ENST00000381020 FAM117BQ6P1L5 589 aa13□□□□□ -0.33
CDX2-201ENST00000381020 ILDR2Q71H61 639 aa13□□□□□ -0.33
CDX2-201ENST00000381020 PIGZQ86VD9 579 aa13□□□□□ -0.33
CDX2-201ENST00000381020 UNC45BQ8IWX7 931 aa13□□□□□ -0.33
CDX2-201ENST00000381020 KIF2BQ8N4N8 673 aa13□□□□□ -0.33
CDX2-201ENST00000381020 PAFAH2Q99487 392 aa13□□□□□ -0.33
CDX2-201ENST00000381020 FAM129AQ9BZQ8 928 aa13□□□□□ -0.33
CDX2-201ENST00000381020 UBP1Q9NZI7 540 aa13□□□□□ -0.33
CDX2-201ENST00000381020 KCNH4Q9UQ05 1017 aa13□□□□□ -0.33
CDX2-201ENST00000381020 HADHBP55084 474 aaKnown RBP13□□□□□ -0.33
CDX2-201ENST00000381020 YWHAZP63104 245 aaKnown RBP13□□□□□ -0.33
CDX2-201ENST00000381020 SNCBQ16143 134 aa13□□□□□ -0.33
CDX2-201ENST00000381020 NUDCD3Q8IVD9 361 aa13□□□□□ -0.33
CDX2-201ENST00000381020 SENP8Q96LD8 212 aa13□□□□□ -0.33
CDX2-201ENST00000381020 SYT15Q9BQS2 421 aa13□□□□□ -0.33
CDX2-201ENST00000381020 HAUS2Q9NVX0 235 aa13□□□□□ -0.33
CDX2-201ENST00000381020 GRHL1Q9NZI5 618 aa13□□□□□ -0.33
CDX2-201ENST00000381020 PPARGC1AQ9UBK2 798 aaKnown RBP13□□□□□ -0.33
CDX2-201ENST00000381020 WDR3Q9UNX4 943 aaKnown RBP eCLIP13□□□□□ -0.33
CDX2-201ENST00000381020 CDY2AQ9Y6F7 541 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms