RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 AGAP11Q8TF27 550 aa17.8■□□□□ 0.44
RXRB-201ENST00000374680 PTPRN2Q92932 1015 aa17.8■□□□□ 0.44
RXRB-201ENST00000374680 SLC13A1Q9BZW2 595 aa17.8■□□□□ 0.44
RXRB-201ENST00000374680 UGT1A7Q9HAW7 530 aa17.8■□□□□ 0.44
RXRB-201ENST00000374680 UGT1A10Q9HAW8 530 aa17.8■□□□□ 0.44
RXRB-201ENST00000374680 UGT1A8Q9HAW9 530 aa17.8■□□□□ 0.44
RXRB-201ENST00000374680 RXFP1Q9HBX9 757 aa17.8■□□□□ 0.44
RXRB-201ENST00000374680 PRKAG3Q9UGI9 489 aa17.8■□□□□ 0.44
RXRB-201ENST00000374680 TUBGCP4Q9UGJ1 667 aa17.8■□□□□ 0.44
RXRB-201ENST00000374680 CHKBQ9Y259 395 aa17.8■□□□□ 0.44
RXRB-201ENST00000374680 H3BRB1 525 aa17.8■□□□□ 0.44
RXRB-201ENST00000374680 MGRN1O60291 552 aa17.8■□□□□ 0.44
RXRB-201ENST00000374680 CDC25CP30307 473 aa17.8■□□□□ 0.44
RXRB-201ENST00000374680 ERFP50548 548 aa17.8■□□□□ 0.44
RXRB-201ENST00000374680 BMPR2Q13873 1038 aa17.8■□□□□ 0.44
RXRB-201ENST00000374680 OTOAQ7RTW8 1153 aa17.8■□□□□ 0.44
RXRB-201ENST00000374680 POLNQ7Z5Q5 900 aa17.8■□□□□ 0.44
RXRB-201ENST00000374680 CMASQ8NFW8 434 aaPredicted RBP17.8■□□□□ 0.44
RXRB-201ENST00000374680 LENG1Q96BZ8 264 aaPredicted RBP17.8■□□□□ 0.44
RXRB-201ENST00000374680 FAM111AQ96PZ2 611 aa17.8■□□□□ 0.44
RXRB-201ENST00000374680 NT5C1AQ9BXI3 368 aa17.8■□□□□ 0.44
RXRB-201ENST00000374680 EIF2AQ9BY44 585 aaKnown RBP17.8■□□□□ 0.44
RXRB-201ENST00000374680 TUT1Q9H6E5 874 aaKnown RBP17.8■□□□□ 0.44
RXRB-201ENST00000374680 MFHAS1Q9Y4C4 1052 aa17.8■□□□□ 0.44
RXRB-201ENST00000374680 LTBP3Q9NS15 1303 aa17.8■□□□□ 0.44
RXRB-201ENST00000374680 APOC4-APOC2K7ER74 178 aa17.79■□□□□ 0.44
RXRB-201ENST00000374680 APOC2P02655 101 aa17.79■□□□□ 0.44
RXRB-201ENST00000374680 MT-ND3P03897 115 aa17.79■□□□□ 0.44
RXRB-201ENST00000374680 BCAR1P56945 870 aa17.79■□□□□ 0.44
RXRB-201ENST00000374680 RELL1Q8IUW5 271 aa17.79■□□□□ 0.44
RXRB-201ENST00000374680 GOLGA2P5Q9HBQ8 144 aa17.79■□□□□ 0.44
RXRB-201ENST00000374680 BARX2Q9UMQ3 279 aaPredicted RBP17.79■□□□□ 0.44
RXRB-201ENST00000374680 PYGBP11216 843 aa17.79■□□□□ 0.44
RXRB-201ENST00000374680 VDRP11473 427 aa17.79■□□□□ 0.44
RXRB-201ENST00000374680 CCDC130P13994 396 aa17.79■□□□□ 0.44
RXRB-201ENST00000374680 PHBP35232 272 aa17.79■□□□□ 0.44
RXRB-201ENST00000374680 GJA5P36382 358 aa17.79■□□□□ 0.44
RXRB-201ENST00000374680 GRIA1P42261 906 aa17.79■□□□□ 0.44
RXRB-201ENST00000374680 CCDC14Q49A88 953 aa17.79■□□□□ 0.44
RXRB-201ENST00000374680 ZNF618Q5T7W0 954 aa17.79■□□□□ 0.44
RXRB-201ENST00000374680 TTC30AQ86WT1 665 aa17.79■□□□□ 0.44
RXRB-201ENST00000374680 TTC13Q8NBP0 860 aa17.79■□□□□ 0.44
RXRB-201ENST00000374680 MCRS1Q96EZ8 462 aa17.79■□□□□ 0.44
RXRB-201ENST00000374680 SERAC1Q96JX3 654 aa17.79■□□□□ 0.44
RXRB-201ENST00000374680 LRRC37BQ96QE4 947 aa17.79■□□□□ 0.44
RXRB-201ENST00000374680 DHX35Q9H5Z1 703 aaKnown RBP17.79■□□□□ 0.44
RXRB-201ENST00000374680 TMPRSS4Q9NRS4 437 aa17.79■□□□□ 0.44
RXRB-201ENST00000374680 CACNG4Q9UBN1 327 aa17.79■□□□□ 0.44
RXRB-201ENST00000374680 MAGED2Q9UNF1 606 aaPredicted RBP17.79■□□□□ 0.44
RXRB-201ENST00000374680 DNAJC25-GNG10A0A024R161 153 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 TCRBV9S1A1TA0A576 114 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 OSBPP22059 807 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 ZNF143P52747 638 aaPredicted RBP17.78■□□□□ 0.44
RXRB-201ENST00000374680 PTK7Q13308 1070 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 SETDB1Q15047 1291 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 GALNTL6Q49A17 601 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 AGGF1Q8N302 714 aaeCLIP17.78■□□□□ 0.44
RXRB-201ENST00000374680 RFWD2Q8NHY2 731 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 CXorf38Q8TB03 319 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 OSMRQ99650 979 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 NME7Q9Y5B8 376 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 C2CD4BA6NLJ0 364 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 GAS2O43903 313 aaKnown RBP17.78■□□□□ 0.44
RXRB-201ENST00000374680 PFKMP08237 780 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 CRADDP78560 199 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 RBP5P82980 135 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 PLEKHG4Q58EX7 1191 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.78■□□□□ 0.44
RXRB-201ENST00000374680 PGLYRP2Q96PD5 576 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 CNPY3Q9BT09 278 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 RSAD1Q9HA92 442 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 CCDC195A0A1B0GUA6 201 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 CXorf49A8MYA2 514 aaPredicted RBP17.78■□□□□ 0.44
RXRB-201ENST00000374680 TYROBPO43914 113 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 TSPAN1O60635 241 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 TOP3BO95985 862 aaKnown RBP17.78■□□□□ 0.44
RXRB-201ENST00000374680 INHBAP08476 426 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 P4HA1P13674 534 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 EFHC2Q5JST6 749 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 MTDHQ86UE4 582 aaKnown RBP17.78■□□□□ 0.44
RXRB-201ENST00000374680 PYROXD2Q8N2H3 581 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 PLD5Q8N7P1 536 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 MECRQ9BV79 373 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 FOXP3Q9BZS1 431 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 ZNF395Q9H8N7 513 aaPredicted RBP17.78■□□□□ 0.44
RXRB-201ENST00000374680 WDR35Q9P2L0 1181 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 NUMBLQ9Y6R0 609 aa17.78■□□□□ 0.44
RXRB-201ENST00000374680 E2F8A0AVK6 867 aa17.77■□□□□ 0.44
RXRB-201ENST00000374680 SPDYE5A6NIY4 337 aa17.77■□□□□ 0.44
RXRB-201ENST00000374680 ZBED1O96006 694 aa17.77■□□□□ 0.44
RXRB-201ENST00000374680 GSTA1P08263 222 aa17.77■□□□□ 0.44
RXRB-201ENST00000374680 F7P08709 466 aaPredicted RBP17.77■□□□□ 0.44
RXRB-201ENST00000374680 LMO2P25791 158 aa17.77■□□□□ 0.44
RXRB-201ENST00000374680 GBE1Q04446 702 aa17.77■□□□□ 0.44
RXRB-201ENST00000374680 CYP4V2Q6ZWL3 525 aaPredicted RBP17.77■□□□□ 0.44
RXRB-201ENST00000374680 CATSPER4Q7RTX7 472 aa17.77■□□□□ 0.44
RXRB-201ENST00000374680 PCGF5Q86SE9 256 aa17.77■□□□□ 0.44
RXRB-201ENST00000374680 DPP9Q86TI2 863 aa17.77■□□□□ 0.44
RXRB-201ENST00000374680 PCDH19Q8TAB3 1148 aa17.77■□□□□ 0.44
RXRB-201ENST00000374680 SNRNP25Q9BV90 132 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms