RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 TTC39BQ5VTQ0 682 aaPredicted RBP18.14■□□□□ 0.49
CHTOP-203ENST00000368690 PRPF39Q86UA1 669 aaKnown RBP18.14■□□□□ 0.49
CHTOP-203ENST00000368690 GPRC5CQ9NQ84 441 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 PLLPQ9Y342 182 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 A0A088AWK7 358 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 HLA-DRAP01903 254 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 CPOXP36551 454 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 CCNFP41002 786 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 RPL7AP62424 266 aaKnown RBP18.14■□□□□ 0.49
CHTOP-203ENST00000368690 WASHC5Q12768 1159 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 DGKZQ13574 1117 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 CUL2Q13617 745 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 HIC1Q14526 733 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 BBS9Q3SYG4 887 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 EFHC1Q5JVL4 640 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 RFX8Q6ZV50 586 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 BBS12Q6ZW61 710 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 RAPH1Q70E73 1250 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 SPATA24Q86W54 205 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 SAMD3Q8N6K7 520 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 KLHL23Q8NBE8 558 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 ZNF516Q92618 1163 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 E2F7Q96AV8 911 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 BTBD9Q96Q07 612 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 KLHL4Q9C0H6 718 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 GINM1Q9NU53 330 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 PTTG2Q9NZH5 202 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.13■□□□□ 0.49
CHTOP-203ENST00000368690 TCRBV9S1A1TA0A576 114 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 C3orf70A6NLC5 250 aaPredicted RBP18.13■□□□□ 0.49
CHTOP-203ENST00000368690 PEX1O43933 1283 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 PLA2G6O60733 806 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 TMEM63AO94886 807 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 ASLP04424 464 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 CFHP08603 1231 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 IMPDH2P12268 514 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 TBXAS1P24557 533 aaPredicted RBP18.13■□□□□ 0.49
CHTOP-203ENST00000368690 PSMC5P62195 406 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 BST1Q10588 318 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 PSMD6Q15008 389 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 TAZQ16635 292 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 DBN1Q16643 649 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 TEX44Q53QW1 395 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 FAM102BQ5T8I3 360 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 SLC26A11Q86WA9 606 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 PASD1Q8IV76 773 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 RBM12BQ8IXT5 1001 aaKnown RBP18.13■□□□□ 0.49
CHTOP-203ENST00000368690 ALDH16A1Q8IZ83 802 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 CHURC1Q8WUH1 139 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 IRGQQ8WZA9 623 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 ELMO3Q96BJ8 720 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 STN1Q9H668 368 aaKnown RBP18.13■□□□□ 0.49
CHTOP-203ENST00000368690 AGO4Q9HCK5 861 aaKnown RBP18.13■□□□□ 0.49
CHTOP-203ENST00000368690 KMT5AQ9NQR1 393 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 XPO7Q9UIA9 1087 aaKnown RBP18.13■□□□□ 0.49
CHTOP-203ENST00000368690 PCDHB4Q9Y5E5 795 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 GLTPD2A6NH11 291 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 LSM8O95777 96 aaKnown RBP18.13■□□□□ 0.49
CHTOP-203ENST00000368690 C4BPAP04003 597 aaKnown RBP18.13■□□□□ 0.49
CHTOP-203ENST00000368690 HARSP12081 509 aaKnown RBP18.13■□□□□ 0.49
CHTOP-203ENST00000368690 KDSRQ06136 332 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 MTMR2Q13614 643 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 TMEM259Q4ZIN3 620 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 FAM43BQ6ZT52 329 aaPredicted RBP18.13■□□□□ 0.49
CHTOP-203ENST00000368690 CRLF3Q8IUI8 442 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 RSAD2Q8WXG1 361 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 HAUS1Q96CS2 278 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 DGCR14Q96DF8 476 aaKnown RBP18.13■□□□□ 0.49
CHTOP-203ENST00000368690 CLPTM1LQ96KA5 538 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 OCEL1Q9H607 264 aa18.13■□□□□ 0.49
CHTOP-203ENST00000368690 DCAF8L1A6NGE4 600 aa18.12■□□□□ 0.49
CHTOP-203ENST00000368690 CASQ2O14958 399 aaPredicted RBP18.12■□□□□ 0.49
CHTOP-203ENST00000368690 BIRC5O15392 142 aa18.12■□□□□ 0.49
CHTOP-203ENST00000368690 OPHN1O60890 802 aa18.12■□□□□ 0.49
CHTOP-203ENST00000368690 SNNO75324 88 aaPredicted RBP18.12■□□□□ 0.49
CHTOP-203ENST00000368690 TMCC1O94876 653 aa18.12■□□□□ 0.49
CHTOP-203ENST00000368690 VCLP18206 1134 aa18.12■□□□□ 0.49
CHTOP-203ENST00000368690 ABCD1P33897 745 aa18.12■□□□□ 0.49
CHTOP-203ENST00000368690 HSD17B4P51659 736 aa18.12■□□□□ 0.49
CHTOP-203ENST00000368690 TMPRSS15P98073 1019 aa18.12■□□□□ 0.49
CHTOP-203ENST00000368690 OTUD4Q01804 1114 aaKnown RBP18.12■□□□□ 0.49
CHTOP-203ENST00000368690 KBTBD12Q3ZCT8 623 aa18.12■□□□□ 0.49
CHTOP-203ENST00000368690 LGSNQ5TDP6 509 aa18.12■□□□□ 0.49
CHTOP-203ENST00000368690 WDR78Q5VTH9 848 aa18.12■□□□□ 0.49
CHTOP-203ENST00000368690 ARID3BQ8IVW6 561 aaPredicted RBP18.12■□□□□ 0.49
CHTOP-203ENST00000368690 ACTL9Q8TC94 416 aa18.12■□□□□ 0.49
CHTOP-203ENST00000368690 TBC1D22BQ9NU19 505 aa18.12■□□□□ 0.49
CHTOP-203ENST00000368690 TEX264Q9Y6I9 313 aa18.12■□□□□ 0.49
CHTOP-203ENST00000368690 F8VP50 259 aa18.11■□□□□ 0.49
CHTOP-203ENST00000368690 EXTL3O43909 919 aa18.11■□□□□ 0.49
CHTOP-203ENST00000368690 KRT37O76014 449 aa18.11■□□□□ 0.49
CHTOP-203ENST00000368690 USP1O94782 785 aa18.11■□□□□ 0.49
CHTOP-203ENST00000368690 SNRPAP09012 282 aaKnown RBP18.11■□□□□ 0.49
CHTOP-203ENST00000368690 CHN2P52757 468 aa18.11■□□□□ 0.49
CHTOP-203ENST00000368690 GDF10P55107 478 aa18.11■□□□□ 0.49
CHTOP-203ENST00000368690 BTKQ06187 659 aa18.11■□□□□ 0.49
CHTOP-203ENST00000368690 SPP2Q13103 211 aa18.11■□□□□ 0.49
CHTOP-203ENST00000368690 DNAJC24Q6P3W2 148 aa18.11■□□□□ 0.49
CHTOP-203ENST00000368690 THNSL1Q8IYQ7 743 aa18.11■□□□□ 0.49
CHTOP-203ENST00000368690 MIPOL1Q8TD10 442 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms