RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 NAALADL2Q58DX5 795 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 DNAJC10Q8IXB1 793 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 YTHDC2Q9H6S0 1430 aaKnown RBP11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 TJP2Q9UDY2 1190 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 CYP11B2P19099 503 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 KCNH2Q12809 1159 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 BBS7Q8IWZ6 715 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 TUBGCP5Q96RT8 1024 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 COPS4Q9BT78 406 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 KRT84Q9NSB2 600 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 CCNT2O60583 730 aaKnown RBP11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 NT5C2P49902 561 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 MTMR2Q13614 643 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 ZNF846Q147U1 533 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 SLCO6A1Q86UG4 719 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 COMMD2Q86X83 199 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 EFHBQ8N7U6 833 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 PGBD4Q96DM1 585 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 AGAP3Q96P47 875 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 DHX35Q9H5Z1 703 aaKnown RBP11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 PNPLA3Q9NST1 481 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 CHORDC1Q9UHD1 332 aaPredicted RBP11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 LNPEPQ9UIQ6 1025 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 PLEKHA8P1O95397 391 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 ALOX5P09917 674 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 SEPHS1P49903 392 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 USF2Q15853 346 aaPredicted RBP11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 SLC25A24Q6NUK1 477 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 ERAP2Q6P179 960 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 CUEDC1Q9NWM3 386 aaPredicted RBP11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 CDY2AQ9Y6F7 541 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 CDY1Q9Y6F8 540 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 MTRF1O75570 445 aaKnown RBP11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 GGPS1O95749 300 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 RAD51Q06609 339 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 LGALS3BPQ08380 585 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 EDRF1Q3B7T1 1238 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 SYDE2Q5VT97 1194 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 C14orf80Q86SX3 495 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 IRF2BPLQ9H1B7 796 aa11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 PPIEQ9UNP9 301 aaKnown RBP11.42□□□□□ -0.58
CDC42BPA-205ENST00000366769 SSNA1O43805 119 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 RALBP11234 206 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 LATS2Q9NRM7 1088 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 PRKAG3Q9UGI9 489 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 CENPXA8MT69 81 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 MLNP12872 115 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 SEMA3AQ14563 771 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 ASPRV1Q53RT3 343 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 SCFD1Q8WVM8 642 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 EFHD2Q96C19 240 aaPredicted RBP11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 SERHL2Q9H4I8 314 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 SERHLQ9NQF3 203 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 B3GALNT1O75752 331 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 LYNP07948 512 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 RABL6Q3YEC7 729 aaPredicted RBP11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 ZNF568Q3ZCX4 644 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 PAPD7Q5XG87 772 aaKnown RBP11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 TMEM270Q6UE05 265 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 NET1Q7Z628 596 aaPredicted RBP11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 ZNF713Q8N859 430 aaPredicted RBP11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 ATG4AQ8WYN0 398 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 ASNSD1Q9NWL6 643 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 MLXQ9UH92 298 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 PROX1Q92786 737 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 WASF2Q9Y6W5 498 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 CD109Q6YHK3 1445 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 PTGES3LE9PB15 166 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 POLR2EP19388 210 aaKnown RBP11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 RPS7P62081 194 aaKnown RBP11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 VEPH1Q14D04 833 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 NFIL3Q16649 462 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 NUDT18Q6ZVK8 323 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 SLC44A2Q8IWA5 706 aaPredicted RBP11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 ELMO2Q96JJ3 720 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 SCN3BQ9NY72 215 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 SHROOM2Q13796 1616 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 SCN2AQ99250 2005 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 TTC7BQ86TV6 843 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 C11orf70Q9BRQ4 267 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 NKX1-2Q9UD57 310 aaPredicted RBP11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 KDM5BQ9UGL1 1544 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 CYP2D7A0A087X1C5 515 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 A0A1W2PQC6 194 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 UNC5CO95185 931 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 GSTM1P09488 218 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 CPA3P15088 417 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 FUT11Q495W5 492 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 PDZK1Q5T2W1 519 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 TTC39BQ5VTQ0 682 aaPredicted RBP11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 BABAM1Q9NWV8 329 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 M0QYV0 167 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 EIF2S1P05198 315 aaKnown RBP11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 SRP54P61011 504 aaKnown RBP11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 DPYDQ12882 1025 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 MYBPC3Q14896 1274 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 ERMARDQ5T6L9 678 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 FAM45BPQ6NSW5 357 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 TRIM48Q8IWZ4 208 aa11.41□□□□□ -0.58
CDC42BPA-205ENST00000366769 TBCKQ8TEA7 893 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms