RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 OPLAHO14841 1288 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 ANXA9O76027 345 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 CSPG5O95196 566 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 CDH3P22223 829 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 CHI3L1P36222 383 aaPredicted RBP13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 SV2CQ496J9 727 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 LMBRD2Q68DH5 695 aaPredicted RBP13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 CDC73Q6P1J9 531 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 C17orf50Q8WW18 174 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 ZNF496Q96IT1 587 aaPredicted RBP13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 NAT9Q9BTE0 207 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 EMSYQ7Z589 1322 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 EIF2AK2P19525 551 aaKnown RBP13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 RASA1P20936 1047 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 NR1I3Q14994 352 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 IRGCQ6NXR0 463 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 RNF19BQ6ZMZ0 732 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 KIAA0408Q6ZU52 694 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 MIER2Q8N344 545 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 CASKIN2Q8WXE0 1202 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 TMEM120AQ9BXJ8 343 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 TRPM5Q9NZQ8 1165 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 RHOBTB3O94955 611 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 PGM3O95394 542 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 RPN2P04844 631 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 GHRP10912 638 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 RPS7P62081 194 aaKnown RBP13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 TMEM132DQ14C87 1099 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 TCHHL1Q5QJ38 904 aaPredicted RBP13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 SLC30A5Q8TAD4 765 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 C1QTNF7Q9BXJ2 289 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 PDE4DIPQ5VU43 2346 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 NDUFB5O43674 189 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 TKTP29401 623 aaKnown RBP13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 PNPLA4P41247 253 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 IZUMO1Q8IYV9 350 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 ZNF512Q96ME7 567 aaPredicted RBP13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 SIK2Q9H0K1 926 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 PUS7LQ9H0K6 701 aaKnown RBP13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 ACAD9Q9H845 621 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 PCDHGA4Q9Y5G9 962 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 VWA5AO00534 786 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 LRRC6Q86X45 466 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 HS6ST3Q8IZP7 471 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 PABPC3Q9H361 631 aaKnown RBP13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 PAK5Q9P286 719 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 SAE1Q9UBE0 346 aaPredicted RBP13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 SLC39A10Q9ULF5 831 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 WDR62O43379 1518 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 MROH7Q68CQ1 1323 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 PABPC1P11940 636 aaKnown RBP13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 STAT5AP42229 794 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 STAT5BP51692 787 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 CCNG2Q16589 344 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 CLEC17AQ6ZS10 378 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 SLC16A3O15427 465 aaKnown RBP13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 GAS2O43903 313 aaKnown RBP13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 P4HBP07237 508 aaKnown RBP13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 H2AFXP16104 143 aaPredicted RBP13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 DDI2Q5TDH0 399 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 NAPEPLDQ6IQ20 393 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 POU1F1P28069 291 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 MAPK10P53779 464 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 NAB2Q15742 525 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 WDR93Q6P2C0 686 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 ATG16L2Q8NAA4 619 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 STARD8Q92502 1023 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 AGPAT5Q9NUQ2 364 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 VAV3Q9UKW4 847 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 A0A088AWK7 358 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 KLHL41O60662 606 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 CBFA2T3O75081 653 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 CNPP09543 421 aaKnown RBP13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 ZNF10P21506 573 aaPredicted RBP13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 MTM1Q13496 603 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 TSNQ15631 228 aaKnown RBP13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 TIGD7Q6NT04 549 aaPredicted RBP13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 THNSL1Q8IYQ7 743 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 CCDC59Q9P031 241 aaKnown RBP13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 CYP2E1P05181 493 aaPredicted RBP13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 ARHGDIBP52566 201 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 GALCP54803 685 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 NYAP1Q6ZVC0 841 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 CCNJLQ8IV13 435 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 DCP1BQ8IZD4 617 aaKnown RBP13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 DEFB107AQ8IZN7 70 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 CACTIN-AS1Q8N1I8 211 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 LRRC71Q8N4P6 559 aa13.62□□□□□ -0.23
SRGAP3-201ENST00000360413 CLRN2A0PK11 232 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 EFCAB10A6NFE3 127 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 CYP26A1O43174 497 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 ADCY6O43306 1168 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 CASP5P51878 434 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 MASTLQ96GX5 879 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 B3GALT6Q96L58 329 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 GOLPH3Q9H4A6 298 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 SCUBE2Q9NQ36 999 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 MYH8P13535 1937 aa13.61□□□□□ -0.23
SRGAP3-201ENST00000360413 CLTBP09497 229 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms