RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 HS6ST1O60243 411 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 CBX6O95503 412 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 GSTM1P09488 218 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 GPD1P21695 349 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 TGM2P21980 687 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 GSSP48637 474 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 SRP54P61011 504 aaKnown RBP10.13□□□□□ -0.79
COL4A6-201ENST00000334504 CDC16Q13042 620 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 EPC2Q52LR7 807 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 DHFR2Q86XF0 187 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 GIMAP8Q8ND71 665 aaPredicted RBP10.13□□□□□ -0.79
COL4A6-201ENST00000334504 LRRN4CLQ8ND94 238 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 FIG4Q92562 907 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 FAM49BQ9NUQ9 324 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 EFCAB10A6NFE3 127 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 FAM196BA6NMK8 535 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 C11orf63Q6NUN7 778 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 TRIM65Q6PJ69 517 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 YAF2Q8IY57 180 aa10.13□□□□□ -0.79
COL4A6-201ENST00000334504 ATXN2LQ8WWM7 1075 aaKnown RBP10.13□□□□□ -0.79
COL4A6-201ENST00000334504 GUCY1B2O75343 617 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 ACOT2P49753 483 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 LGALS3BPQ08380 585 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 FCHO2Q0JRZ9 810 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 CNTN1Q12860 1018 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 FAM98BQ52LJ0 330 aaKnown RBP10.12□□□□□ -0.79
COL4A6-201ENST00000334504 FAM196AQ6ZSG2 479 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 ATP8B4Q8TF62 1192 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 TUFT1Q9NNX1 390 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 CAPN6Q9Y6Q1 641 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 FYNP06241 537 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 FGFR3P22607 806 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 KRT74Q7RTS7 529 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 CYP4Z1Q86W10 505 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 FAM228AQ86W67 206 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 TCAIMQ8N3R3 496 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 PPP1R10Q96QC0 940 aaKnown RBP10.12□□□□□ -0.79
COL4A6-201ENST00000334504 RIBC2Q9H4K1 309 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 KLHL1Q9NR64 748 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 TPRKBQ9Y3C4 175 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 GLI1P08151 1106 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 GRIK1P39086 918 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 SLC44A5Q8NCS7 719 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 OSCP1Q8WVF1 389 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 TFB1MQ8WVM0 346 aaKnown RBP10.12□□□□□ -0.79
COL4A6-201ENST00000334504 PYDC1Q8WXC3 89 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 FBXO40Q9UH90 709 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 SLC1A6P48664 564 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 ARHGEF19Q8IW93 802 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 EID3Q8N140 333 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 DPP10Q8N608 796 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 MMADHCQ9H3L0 296 aaPredicted RBP10.12□□□□□ -0.79
COL4A6-201ENST00000334504 ABCB10Q9NRK6 738 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 RGS20O76081 388 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 NCOA4Q13772 614 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 PDIA5Q14554 519 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 PHF20Q9BVI0 1012 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 NAALADL1Q9UQQ1 740 aa10.12□□□□□ -0.79
COL4A6-201ENST00000334504 MTRF1O75570 445 aaKnown RBP10.11□□□□□ -0.79
COL4A6-201ENST00000334504 SASH3O75995 380 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 ASNSP08243 561 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 CYP19A1P11511 503 aaPredicted RBP10.11□□□□□ -0.79
COL4A6-201ENST00000334504 SNRNP35Q16560 246 aaKnown RBP10.11□□□□□ -0.79
COL4A6-201ENST00000334504 CLEC16AQ2KHT3 1053 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 STOX1Q6ZVD7 989 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 SRBD1Q8N5C6 995 aaKnown RBP10.11□□□□□ -0.79
COL4A6-201ENST00000334504 POC5Q8NA72 575 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 FNIP1Q8TF40 1166 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 TNIP3Q96KP6 325 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 BDH2Q9BUT1 245 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 FRMD8Q9BZ67 464 aaPredicted RBP10.11□□□□□ -0.79
COL4A6-201ENST00000334504 CAPN10Q9HC96 672 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 FEM1BQ9UK73 627 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 AGAP1Q9UPQ3 857 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 P4HA2O15460 535 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 UPP2O95045 317 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 FDFT1P37268 417 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 ETFBP38117 255 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 NT5C2P49902 561 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 HK2P52789 917 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 DGKDQ16760 1214 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 NAPEPLDQ6IQ20 393 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 POU5F2Q8N7G0 328 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 DNAJC7Q99615 494 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 CNPY3Q9BT09 278 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 ARMCX1Q9P291 453 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 ZNF222Q9UK12 451 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 COMMD3-BMI1R4GMX3 469 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 HMBSP08397 361 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 PRLRP16471 622 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 EPHA7Q15375 998 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 CYP2R1Q6VVX0 501 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 RBM44Q6ZP01 1051 aaKnown RBP10.11□□□□□ -0.79
COL4A6-201ENST00000334504 NLGN1Q8N2Q7 840 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 DHRSXQ8N5I4 330 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 RNF148Q8N7C7 305 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 RAET1EQ8TD07 263 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 HPS1Q92902 700 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 CCDC126Q96EE4 140 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 ZNF560Q96MR9 790 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms