RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 SFT2D3Q587I9 215 aa8.21□□□□□ -1.09
VMA21-201ENST00000330374 PLEKHA7Q6IQ23 1121 aa8.21□□□□□ -1.09
VMA21-201ENST00000330374 TATDN1Q6P1N9 297 aa8.21□□□□□ -1.09
VMA21-201ENST00000330374 DENND5BQ6ZUT9 1274 aa8.21□□□□□ -1.09
VMA21-201ENST00000330374 MAP4K3Q8IVH8 894 aa8.21□□□□□ -1.09
VMA21-201ENST00000330374 DRAXINQ8NBI3 349 aaPredicted RBP8.21□□□□□ -1.09
VMA21-201ENST00000330374 FAM81AQ8TBF8 368 aa8.21□□□□□ -1.09
VMA21-201ENST00000330374 ZNF606Q8WXB4 792 aa8.21□□□□□ -1.09
VMA21-201ENST00000330374 E2F7Q96AV8 911 aa8.21□□□□□ -1.09
VMA21-201ENST00000330374 OPTNQ96CV9 577 aa8.21□□□□□ -1.09
VMA21-201ENST00000330374 DMAP1Q9NPF5 467 aaPredicted RBP8.21□□□□□ -1.09
VMA21-201ENST00000330374 DDX18Q9NVP1 670 aaKnown RBP8.21□□□□□ -1.09
VMA21-201ENST00000330374 ARIH1Q9Y4X5 557 aaPredicted RBP8.21□□□□□ -1.09
VMA21-201ENST00000330374 MAD1L1Q9Y6D9 718 aa8.21□□□□□ -1.09
VMA21-201ENST00000330374 DHX15O43143 795 aaKnown RBP8.21□□□□□ -1.1
VMA21-201ENST00000330374 HNRNPRO43390 633 aaKnown RBP8.21□□□□□ -1.1
VMA21-201ENST00000330374 ATP6V1B1P15313 513 aa8.21□□□□□ -1.1
VMA21-201ENST00000330374 PEX2P28328 305 aa8.21□□□□□ -1.1
VMA21-201ENST00000330374 CDKN2BP42772 138 aa8.21□□□□□ -1.1
VMA21-201ENST00000330374 SLC18A1P54219 525 aa8.21□□□□□ -1.1
VMA21-201ENST00000330374 AQP4P55087 323 aa8.21□□□□□ -1.1
VMA21-201ENST00000330374 NCKAP1LP55160 1127 aa8.21□□□□□ -1.1
VMA21-201ENST00000330374 EIF3EP60228 445 aaKnown RBP8.21□□□□□ -1.1
VMA21-201ENST00000330374 PDE1BQ01064 536 aa8.21□□□□□ -1.1
VMA21-201ENST00000330374 DARS2Q6PI48 645 aaKnown RBP8.21□□□□□ -1.1
VMA21-201ENST00000330374 APLFQ8IW19 511 aaPredicted RBP8.21□□□□□ -1.1
VMA21-201ENST00000330374 CDAN1Q8IWY9 1227 aa8.21□□□□□ -1.1
VMA21-201ENST00000330374 OR5B17Q8NGF7 314 aa8.21□□□□□ -1.1
VMA21-201ENST00000330374 NGLY1Q96IV0 654 aa8.21□□□□□ -1.1
VMA21-201ENST00000330374 MFSD14AQ96MC6 490 aa8.21□□□□□ -1.1
VMA21-201ENST00000330374 SLC9A2Q9UBY0 812 aa8.21□□□□□ -1.1
VMA21-201ENST00000330374 ZNRF3Q9ULT6 936 aa8.21□□□□□ -1.1
VMA21-201ENST00000330374 CXorf49A8MYA2 514 aaPredicted RBP8.21□□□□□ -1.1
VMA21-201ENST00000330374 RBP3P10745 1247 aa8.21□□□□□ -1.1
VMA21-201ENST00000330374 DLG1Q12959 904 aa8.21□□□□□ -1.1
VMA21-201ENST00000330374 PTP4A2Q12974 167 aa8.21□□□□□ -1.1
VMA21-201ENST00000330374 MED21Q13503 144 aa8.21□□□□□ -1.1
VMA21-201ENST00000330374 MMEL1Q495T6 779 aa8.21□□□□□ -1.1
VMA21-201ENST00000330374 CES4AQ5XG92 561 aa8.21□□□□□ -1.1
VMA21-201ENST00000330374 C16orf46Q6P387 395 aa8.21□□□□□ -1.1
VMA21-201ENST00000330374 C1orf228Q6PIY5 440 aa8.21□□□□□ -1.1
VMA21-201ENST00000330374 ANO5Q75V66 913 aa8.21□□□□□ -1.1
VMA21-201ENST00000330374 POLNQ7Z5Q5 900 aa8.21□□□□□ -1.1
VMA21-201ENST00000330374 MZB1Q8WU39 189 aa8.21□□□□□ -1.1
VMA21-201ENST00000330374 MPP4Q96JB8 637 aa8.21□□□□□ -1.1
VMA21-201ENST00000330374 AGO4Q9HCK5 861 aaKnown RBP8.21□□□□□ -1.1
VMA21-201ENST00000330374 PREBQ9HCU5 417 aa8.21□□□□□ -1.1
VMA21-201ENST00000330374 SEPT9Q9UHD8 586 aaPredicted RBP8.21□□□□□ -1.1
VMA21-201ENST00000330374 TAGLN3Q9UI15 199 aa8.21□□□□□ -1.1
VMA21-201ENST00000330374 MYOCOSA0A1B0GUC4 107 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 TMEM191CA6NGB0 347 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 A8MXQ7 604 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 H7C0C1 242 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 TMEM191BP0C7N4 346 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 ATP5OP48047 213 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 MTERF2Q49AM1 385 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 HSF5Q4G112 596 aaPredicted RBP8.2□□□□□ -1.1
VMA21-201ENST00000330374 RABGAP1LQ5R372 815 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 GPAT2Q6NUI2 795 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 MARK2Q7KZI7 788 aaKnown RBP8.2□□□□□ -1.1
VMA21-201ENST00000330374 CRLF3Q8IUI8 442 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 KCTD6Q8NC69 237 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 AGR3Q8TD06 166 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 CHURC1Q8WUH1 139 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 FAF2Q96CS3 445 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 HIC2Q96JB3 615 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 GCNAQ96QF7 691 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 TAAR1Q96RJ0 339 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 C20orf27Q9GZN8 174 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 RAVER2Q9HCJ3 691 aaKnown RBP8.2□□□□□ -1.1
VMA21-201ENST00000330374 SNCAIPQ9Y6H5 919 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 UTRNP46939 3433 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.2□□□□□ -1.1
VMA21-201ENST00000330374 LRRIQ4A6NIV6 560 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 STAM2O75886 525 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 TM7SF2O76062 418 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 VNN1O95497 513 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 CCNE2O96020 404 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 NCF2P19878 526 aaPredicted RBP8.2□□□□□ -1.1
VMA21-201ENST00000330374 RFC1P35251 1148 aaPredicted RBP8.2□□□□□ -1.1
VMA21-201ENST00000330374 CDK7P50613 346 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 MRPS9P82933 396 aaKnown RBP8.2□□□□□ -1.1
VMA21-201ENST00000330374 MMRN1Q13201 1228 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 SPATA24Q86W54 205 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 NAT8LQ8N9F0 302 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 OR6Y1Q8NGX8 325 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 ABTB1Q969K4 478 aaPredicted RBP8.2□□□□□ -1.1
VMA21-201ENST00000330374 TMEM143Q96AN5 459 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 PRMT6Q96LA8 375 aaPredicted RBP8.2□□□□□ -1.1
VMA21-201ENST00000330374 ZDHHC15Q96MV8 337 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 RBAKQ9NYW8 714 aaPredicted RBP8.2□□□□□ -1.1
VMA21-201ENST00000330374 LMCD1Q9NZU5 365 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 STRIP2Q9ULQ0 834 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 SLC4A7Q9Y6M7 1214 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 ITGAVP06756 1048 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 IL1R2P27930 398 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 MSX2P35548 267 aaPredicted RBP8.2□□□□□ -1.1
VMA21-201ENST00000330374 ETV4P43268 484 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 KRT72Q14CN4 511 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 TRMT5Q32P41 509 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms