RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 POLNQ7Z5Q5 900 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 FAM131BQ86XD5 332 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 SLC35B2Q8TB61 432 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 SLC35F5Q8WV83 523 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 SNRNP25Q9BV90 132 aaKnown RBP15.23■□□□□ 0.03
SMG8-201ENST00000300917 INPP5FQ9Y2H2 1132 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 GMNCA6NCL1 334 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 PTGESO14684 152 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 MCF2LO15068 1137 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 AKR1A1P14550 325 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 GABRB2P47870 512 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 SLC6A3Q01959 620 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 SMAD1Q15797 465 aaKnown RBP15.23■□□□□ 0.03
SMG8-201ENST00000300917 MSS51Q4VC12 460 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 BBS12Q6ZW61 710 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 PYROXD2Q8N2H3 581 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 ADAM32Q8TC27 787 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 P3H4Q92791 437 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 KHSRPQ92945 711 aaKnown RBP eCLIP15.23■□□□□ 0.03
SMG8-201ENST00000300917 KIF9Q9HAQ2 790 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 FAM169AQ9Y6X4 670 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 MYO1CO00159 1063 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 HAS3O00219 553 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 CYB561D2O14569 222 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 SPAG7O75391 227 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 VIMP08670 466 aaKnown RBP15.23■□□□□ 0.03
SMG8-201ENST00000300917 SSTR1P30872 391 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 CRYBB1P53674 252 aaPredicted RBP15.23■□□□□ 0.03
SMG8-201ENST00000300917 COPS2P61201 443 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 IFT88Q13099 833 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 DPYSL3Q14195 570 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 EFTUD2Q15029 972 aaKnown RBP eCLIP15.23■□□□□ 0.03
SMG8-201ENST00000300917 ALKAL1Q6UXT8 129 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 CYP4V2Q6ZWL3 525 aaPredicted RBP15.23■□□□□ 0.03
SMG8-201ENST00000300917 FNIP1Q8TF40 1166 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 PGM2Q96G03 612 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 MFHAS1Q9Y4C4 1052 aa15.23■□□□□ 0.03
SMG8-201ENST00000300917 EXOC1LA0A1B0GW35 172 aa15.22■□□□□ 0.03
SMG8-201ENST00000300917 M0QZ92 97 aa15.22■□□□□ 0.03
SMG8-201ENST00000300917 AVILO75366 819 aa15.22■□□□□ 0.03
SMG8-201ENST00000300917 GHRP10912 638 aa15.22■□□□□ 0.03
SMG8-201ENST00000300917 CAP1Q01518 475 aa15.22■□□□□ 0.03
SMG8-201ENST00000300917 ADIGQ0VDE8 80 aa15.22■□□□□ 0.03
SMG8-201ENST00000300917 FNBP1LQ5T0N5 605 aa15.22■□□□□ 0.03
SMG8-201ENST00000300917 NT5DC4Q86YG4 428 aa15.22■□□□□ 0.03
SMG8-201ENST00000300917 CMASQ8NFW8 434 aaPredicted RBP15.22■□□□□ 0.03
SMG8-201ENST00000300917 XPO6Q96QU8 1125 aaKnown RBP15.22■□□□□ 0.03
SMG8-201ENST00000300917 MIOSQ9NXC5 875 aa15.22■□□□□ 0.03
SMG8-201ENST00000300917 NAALADL1Q9UQQ1 740 aa15.22■□□□□ 0.03
SMG8-201ENST00000300917 PIRO00625 290 aa15.22■□□□□ 0.03
SMG8-201ENST00000300917 POMCP01189 267 aa15.22■□□□□ 0.03
SMG8-201ENST00000300917 THPOP40225 353 aa15.22■□□□□ 0.03
SMG8-201ENST00000300917 SCNN1GP51170 649 aa15.22■□□□□ 0.03
SMG8-201ENST00000300917 MDH1BQ5I0G3 518 aa15.22■□□□□ 0.03
SMG8-201ENST00000300917 LRRC52Q8N7C0 313 aa15.22■□□□□ 0.03
SMG8-201ENST00000300917 USP6NLQ92738 828 aa15.22■□□□□ 0.03
SMG8-201ENST00000300917 RHOBTB2Q9BYZ6 727 aa15.22■□□□□ 0.03
SMG8-201ENST00000300917 AGO3Q9H9G7 860 aaKnown RBP15.22■□□□□ 0.03
SMG8-201ENST00000300917 TMEM120BA0PK00 339 aa15.21■□□□□ 0.03
SMG8-201ENST00000300917 KCNN4O15554 427 aa15.21■□□□□ 0.03
SMG8-201ENST00000300917 LIG3P49916 1009 aa15.21■□□□□ 0.03
SMG8-201ENST00000300917 HDAC4P56524 1084 aa15.21■□□□□ 0.03
SMG8-201ENST00000300917 PRKCZQ05513 592 aa15.21■□□□□ 0.03
SMG8-201ENST00000300917 ZKSCAN8Q15776 578 aaPredicted RBP15.21■□□□□ 0.03
SMG8-201ENST00000300917 PIGZQ86VD9 579 aa15.21■□□□□ 0.03
SMG8-201ENST00000300917 ZCCHC9Q8N567 271 aaKnown RBP15.21■□□□□ 0.03
SMG8-201ENST00000300917 TMEM63AO94886 807 aa15.21■□□□□ 0.03
SMG8-201ENST00000300917 AGTP01019 485 aa15.21■□□□□ 0.03
SMG8-201ENST00000300917 MYCP01106 439 aaPredicted RBP15.21■□□□□ 0.03
SMG8-201ENST00000300917 CD4P01730 458 aa15.21■□□□□ 0.03
SMG8-201ENST00000300917 CLCNKBP51801 687 aa15.21■□□□□ 0.03
SMG8-201ENST00000300917 MAP3K7CLP57077 242 aa15.21■□□□□ 0.03
SMG8-201ENST00000300917 IFRD2Q12894 506 aaPredicted RBP15.21■□□□□ 0.03
SMG8-201ENST00000300917 NME3Q13232 169 aa15.21■□□□□ 0.03
SMG8-201ENST00000300917 DCAF6Q58WW2 860 aa15.21■□□□□ 0.03
SMG8-201ENST00000300917 RNASEH2BQ5TBB1 312 aaKnown RBP15.21■□□□□ 0.03
SMG8-201ENST00000300917 CPT1BQ92523 772 aa15.21■□□□□ 0.03
SMG8-201ENST00000300917 NKD2Q969F2 451 aaPredicted RBP15.21■□□□□ 0.03
SMG8-201ENST00000300917 CEP41Q9BYV8 373 aa15.21■□□□□ 0.03
SMG8-201ENST00000300917 TRAPPC3O43617 180 aa15.21■□□□□ 0.02
SMG8-201ENST00000300917 ITGAVP06756 1048 aa15.21■□□□□ 0.02
SMG8-201ENST00000300917 BRAFP15056 766 aa15.21■□□□□ 0.02
SMG8-201ENST00000300917 BCAR1P56945 870 aa15.21■□□□□ 0.02
SMG8-201ENST00000300917 CAV1Q03135 178 aa15.21■□□□□ 0.02
SMG8-201ENST00000300917 PKDCCQ504Y2 493 aa15.21■□□□□ 0.02
SMG8-201ENST00000300917 CCDC185Q8N715 623 aa15.21■□□□□ 0.02
SMG8-201ENST00000300917 BBOF1Q8ND07 529 aa15.21■□□□□ 0.02
SMG8-201ENST00000300917 KATNAL1Q9BW62 490 aa15.21■□□□□ 0.02
SMG8-201ENST00000300917 PCDH9Q9HC56 1237 aa15.21■□□□□ 0.02
SMG8-201ENST00000300917 GGT7Q9UJ14 662 aa15.21■□□□□ 0.02
SMG8-201ENST00000300917 KIAA1257Q9ULG3 409 aa15.21■□□□□ 0.02
SMG8-201ENST00000300917 RBL1P28749 1068 aa15.2■□□□□ 0.02
SMG8-201ENST00000300917 CD52P31358 61 aa15.2■□□□□ 0.02
SMG8-201ENST00000300917 ROR1Q01973 937 aa15.2■□□□□ 0.02
SMG8-201ENST00000300917 BST2Q10589 180 aaKnown RBP15.2■□□□□ 0.02
SMG8-201ENST00000300917 MPP2Q14168 576 aa15.2■□□□□ 0.02
SMG8-201ENST00000300917 HIF1AQ16665 826 aa15.2■□□□□ 0.02
SMG8-201ENST00000300917 C4orf33Q8N1A6 199 aa15.2■□□□□ 0.02
SMG8-201ENST00000300917 B3GALNT2Q8NCR0 500 aa15.2■□□□□ 0.02
SMG8-201ENST00000300917 PRCCQ92733 491 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms