RNA–Protein interactions for RNA: ENST00000272433.6

SFXN5-201, Transcript of sideroflexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN5, Length 4,140 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-201ENST00000272433 C9orf57Q5W0N0 161 aa11.57□□□□□ -0.56
SFXN5-201ENST00000272433 ATP11CQ8NB49 1132 aa11.57□□□□□ -0.56
SFXN5-201ENST00000272433 SLITRK1Q96PX8 696 aa11.57□□□□□ -0.56
SFXN5-201ENST00000272433 TSR3Q9UJK0 312 aaKnown RBP11.57□□□□□ -0.56
SFXN5-201ENST00000272433 SMCHD1A6NHR9 2005 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 A0A087WUV0 522 aaPredicted RBP11.56□□□□□ -0.56
SFXN5-201ENST00000272433 HOXC6P09630 235 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 CCND3P30281 292 aaPredicted RBP11.56□□□□□ -0.56
SFXN5-201ENST00000272433 FNTAP49354 379 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 MNAT1P51948 309 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 ACCSLQ4AC99 568 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 NPNTQ6UXI9 565 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 GIPC2Q8TF65 315 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 EXT2Q93063 718 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 GCNAQ96QF7 691 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.56□□□□□ -0.56
SFXN5-201ENST00000272433 SMPD4Q9NXE4 827 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 ZC3H7BQ9UGR2 993 aaKnown RBP11.56□□□□□ -0.56
SFXN5-201ENST00000272433 PGAP2Q9UHJ9 254 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 KNL1Q8NG31 2342 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 A0A1B0GUA9 196 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 HCRTO43612 131 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 PMPCBO75439 489 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 LGR5O75473 907 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 ATG7O95352 703 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 CYP1A2P05177 515 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 TROVE2P10155 538 aaKnown RBP eCLIP11.56□□□□□ -0.56
SFXN5-201ENST00000272433 LMO2P25791 158 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 SEC24CP53992 1094 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 PPP2R2AP63151 447 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 SLC6A3Q01959 620 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 NXNQ6DKJ4 435 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 PRELID2Q8N945 189 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 EPS8L3Q8TE67 593 aaKnown RBP11.56□□□□□ -0.56
SFXN5-201ENST00000272433 DPEP3Q9H4B8 488 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 PIDD1Q9HB75 910 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 NOCTQ9UK39 431 aaKnown RBP11.56□□□□□ -0.56
SFXN5-201ENST00000272433 BRWD3Q6RI45 1802 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 KRT37O76014 449 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 EDNRBP24530 442 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 WNT7BP56706 349 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 DENND5BQ6ZUT9 1274 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 TFAP2DQ7Z6R9 452 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 TSEN2Q8NCE0 465 aaKnown RBP11.56□□□□□ -0.56
SFXN5-201ENST00000272433 HNRNPLLQ8WVV9 542 aaKnown RBP11.56□□□□□ -0.56
SFXN5-201ENST00000272433 RPRD1AQ96P16 312 aaPredicted RBP11.56□□□□□ -0.56
SFXN5-201ENST00000272433 ZIC5Q96T25 663 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 ERVK-5Q9HDB9 667 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 TLK1Q9UKI8 766 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 SLC27A5Q9Y2P5 690 aa11.56□□□□□ -0.56
SFXN5-201ENST00000272433 COL2A1P02458 1487 aaPredicted RBP11.56□□□□□ -0.56
SFXN5-201ENST00000272433 SETSIPP0DME0 302 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 MMP8P22894 467 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 SERPINB6P35237 376 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 CLCNKBP51801 687 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 CENPCQ03188 943 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 ASTE1Q2TB18 679 aaPredicted RBP11.55□□□□□ -0.56
SFXN5-201ENST00000272433 ZC3H12AQ5D1E8 599 aaKnown RBP11.55□□□□□ -0.56
SFXN5-201ENST00000272433 CST9Q5W186 159 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 NT5DC4Q86YG4 428 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 IPMKQ8NFU5 416 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 DDX27Q96GQ7 796 aaKnown RBP11.55□□□□□ -0.56
SFXN5-201ENST00000272433 MS4A4AQ96JQ5 239 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 C16orf70Q9BSU1 422 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 HAUS2Q9NVX0 235 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 GGT7Q9UJ14 662 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 CCDC195A0A1B0GUA6 201 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 INHAP05111 366 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 CYP2F1P24903 491 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 PMLP29590 882 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 FLT3P36888 993 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 PBX3P40426 434 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 RAD23BP54727 409 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 TARBP2Q15633 366 aaKnown RBP11.55□□□□□ -0.56
SFXN5-201ENST00000272433 IL31Q6EBC2 164 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 B3GNT9Q6UX72 402 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 CRELD2Q6UXH1 353 aaPredicted RBP11.55□□□□□ -0.56
SFXN5-201ENST00000272433 SLC25A41Q8N5S1 370 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 HES6Q96HZ4 224 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 TWNKQ96RR1 684 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 DCLK3Q9C098 648 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 MORF4L1Q9UBU8 362 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 MYH8P13535 1937 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 SIGLEC16A6NMB1 481 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 ERBB2P04626 1255 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 GARSP41250 739 aaKnown RBP11.55□□□□□ -0.56
SFXN5-201ENST00000272433 MAPRE1Q15691 268 aaKnown RBP11.55□□□□□ -0.56
SFXN5-201ENST00000272433 RNF135Q8IUD6 432 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 ATPAF2Q8N5M1 289 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 CYP4F11Q9HBI6 524 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 COQ4Q9Y3A0 265 aa11.55□□□□□ -0.56
SFXN5-201ENST00000272433 IQANK1A0A1B0GTG1 560 aa11.54□□□□□ -0.56
SFXN5-201ENST00000272433 COPEO14579 308 aa11.54□□□□□ -0.56
SFXN5-201ENST00000272433 GIPC1O14908 333 aa11.54□□□□□ -0.56
SFXN5-201ENST00000272433 JCHAINP01591 159 aa11.54□□□□□ -0.56
SFXN5-201ENST00000272433 ALDH1A3P47895 512 aa11.54□□□□□ -0.56
SFXN5-201ENST00000272433 BTG3Q14201 252 aaPredicted RBP11.54□□□□□ -0.56
SFXN5-201ENST00000272433 CCNG2Q16589 344 aa11.54□□□□□ -0.56
SFXN5-201ENST00000272433 FAM133BQ5BKY9 247 aaKnown RBP11.54□□□□□ -0.56
SFXN5-201ENST00000272433 PPP4R1Q8TF05 950 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms