RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 PIK3R5Q8WYR1 880 aa13.75□□□□□ -0.21
SMG9-201ENST00000270066 PROSCO94903 275 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 TKTL1P51854 596 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 AMPD2Q01433 879 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 VGLL4Q14135 290 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 PPP1R36Q96LQ0 422 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 ZIM3Q96PE6 472 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 TMEM51Q9NW97 253 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 USP18Q9UMW8 372 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 MTO1Q9Y2Z2 717 aaKnown RBP13.74□□□□□ -0.21
SMG9-201ENST00000270066 H2AFYO75367 372 aaKnown RBP13.74□□□□□ -0.21
SMG9-201ENST00000270066 ENO1P06733 434 aaKnown RBP13.74□□□□□ -0.21
SMG9-201ENST00000270066 C1QBPQ07021 282 aaKnown RBP13.74□□□□□ -0.21
SMG9-201ENST00000270066 MAPK7Q13164 816 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 EXD1Q8NHP7 514 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 HASPINQ8TF76 798 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 MKL1Q969V6 931 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 OLFM3Q96PB7 478 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 UBE2OQ9C0C9 1292 aaKnown RBP13.74□□□□□ -0.21
SMG9-201ENST00000270066 NPHS2Q9NP85 383 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 TRAF3IP3Q9Y228 551 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 NCAM2O15394 837 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 H2AFXP16104 143 aaPredicted RBP13.74□□□□□ -0.21
SMG9-201ENST00000270066 PSMC6P62333 389 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 PTGISQ16647 500 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 C6orf10Q5SRN2 563 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 CATSPERGQ6ZRH7 1159 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 TMC7Q7Z402 723 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 TRIM48Q8IWZ4 208 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 VGLL2Q8N8G2 317 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 STN1Q9H668 368 aaKnown RBP13.74□□□□□ -0.21
SMG9-201ENST00000270066 DRG1Q9Y295 367 aaKnown RBP13.74□□□□□ -0.21
SMG9-201ENST00000270066 RAG1P15918 1043 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 MED21Q13503 144 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 AGAP9Q5VTM2 703 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 SETD3Q86TU7 594 aaPredicted RBP13.74□□□□□ -0.21
SMG9-201ENST00000270066 ABRAQ8N0Z2 381 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 DDI1Q8WTU0 396 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 CMTM5Q96DZ9 223 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 SERPINB12Q96P63 405 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 NAT9Q9BTE0 207 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 TMEM39AQ9NV64 488 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 INTS13Q9NVM9 706 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 WARS2Q9UGM6 360 aaKnown RBP13.74□□□□□ -0.21
SMG9-201ENST00000270066 POU4F1Q01851 419 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 KLC1Q07866 573 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.74□□□□□ -0.21
SMG9-201ENST00000270066 XPO6Q96QU8 1125 aaKnown RBP13.74□□□□□ -0.21
SMG9-201ENST00000270066 ADAM33Q9BZ11 813 aa13.74□□□□□ -0.21
SMG9-201ENST00000270066 USP15Q9Y4E8 981 aaPredicted RBP13.74□□□□□ -0.21
SMG9-201ENST00000270066 SDR42E2A6NKP2 422 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 LRRIQ3A6PVS8 624 aaPredicted RBP13.73□□□□□ -0.21
SMG9-201ENST00000270066 ADCY3O60266 1144 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 LZTS3O60299 673 aaPredicted RBP13.73□□□□□ -0.21
SMG9-201ENST00000270066 LRRC36Q1X8D7 754 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 SPOCD1Q6ZMY3 1216 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 PRPF18Q99633 342 aaKnown RBP13.73□□□□□ -0.21
SMG9-201ENST00000270066 A1CFQ9NQ94 594 aaKnown RBP13.73□□□□□ -0.21
SMG9-201ENST00000270066 GPRC5DQ9NZD1 345 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 VPS28Q9UK41 221 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 PQBP1O60828 265 aaKnown RBP13.73□□□□□ -0.21
SMG9-201ENST00000270066 PRLRP16471 622 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 HOMEZQ8IX15 550 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 VPS37AQ8NEZ2 397 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 PDGFCQ9NRA1 345 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 WWOXQ9NZC7 414 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 WHRNQ9P202 907 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 LZTS1Q9Y250 596 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 CNTNAP2Q9UHC6 1331 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 TRPC5OSA6NMA1 111 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 VPS26AO75436 327 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 VCLP18206 1134 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 PCYT1AP49585 367 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 SOX10P56693 466 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 KDSRQ06136 332 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 CDKAL1Q5VV42 579 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 LVRNQ6Q4G3 990 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 RBM43Q6ZSC3 357 aaKnown RBP13.73□□□□□ -0.21
SMG9-201ENST00000270066 SLC47A2Q86VL8 602 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 BHMTQ93088 406 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 E2F7Q96AV8 911 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 LRRC40Q9H9A6 602 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 FAM198AQ9UFP1 575 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 FAM32AQ9Y421 112 aaKnown RBP13.73□□□□□ -0.21
SMG9-201ENST00000270066 CRTAMO95727 393 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 POMCP01189 267 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 TAL1P17542 331 aaPredicted RBP13.73□□□□□ -0.21
SMG9-201ENST00000270066 BRSK2Q8IWQ3 736 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 RXFP2Q8WXD0 754 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 SMARCD1Q96GM5 515 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 KCNK16Q96T55 309 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 GID8Q9NWU2 228 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 ARHGAP26Q9UNA1 814 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 TFR2Q9UP52 801 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 RPS6KL1Q9Y6S9 549 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 ADGRA2Q96PE1 1338 aa13.73□□□□□ -0.21
SMG9-201ENST00000270066 TBC1D12O60347 775 aa13.72□□□□□ -0.21
SMG9-201ENST00000270066 MSCO60682 206 aa13.72□□□□□ -0.21
SMG9-201ENST00000270066 CKBP12277 381 aa13.72□□□□□ -0.21
SMG9-201ENST00000270066 KCNA3P22001 575 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms