RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 HARS2P49590 506 aaKnown RBP11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 NOMO3P69849 1222 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 RPS6KA1Q15418 735 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 SEL1L2Q5TEA6 688 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 KIAA0319Q5VV43 1072 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 SLC8B1Q6J4K2 584 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 RAD9BQ6WBX8 426 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 MON1AQ86VX9 555 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 SP7Q8TDD2 431 aaPredicted RBP11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 THAP2Q9H0W7 228 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 CHST7Q9NS84 486 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 INTUQ9ULD6 942 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 SLC38A8A6NNN8 435 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 HIDE1A8MVS5 230 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 IRF1P10914 325 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 HECTD3Q5T447 861 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 CLEC20AQ6ZU45 233 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 DNAJB7Q7Z6W7 309 aaPredicted RBP11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 GPR65Q8IYL9 337 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 BCL7CQ8WUZ0 217 aaPredicted RBP11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 ABCC13Q9NSE7 274 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 DDIT4Q9NX09 232 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 ADGRG1Q9Y653 693 aa11.67□□□□□ -0.54
TNFAIP3-201ENST00000237289 CCDC195A0A1B0GUA6 201 aa11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 CTAGE9A4FU28 777 aa11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 IGFBP6P24592 240 aaPredicted RBP11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 LRRC31Q6UY01 552 aa11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 DDX50Q9BQ39 737 aaKnown RBP11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 DNAI1Q9UI46 699 aa11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 M0QYT0 321 aa11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 PMF1Q6P1K2 205 aa11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 WHAMMQ8TF30 809 aa11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 STK32AQ8WU08 396 aa11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 C8orf48Q96LL4 319 aa11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 POPDC2Q9HBU9 364 aa11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 PCSK1NQ9UHG2 260 aa11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 SLC12A8A0AV02 714 aa11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 F9P00740 461 aa11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 HDCP19113 662 aa11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 ATP5C1P36542 298 aaKnown RBP11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 ARL4AP40617 200 aa11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 YWHAGP61981 247 aaKnown RBP eCLIP11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 SCARA3Q6AZY7 606 aa11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 LRRTM3Q86VH5 581 aa11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 KIF18AQ8NI77 898 aa11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 SLC35G2Q8TBE7 412 aa11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 SIK2Q9H0K1 926 aa11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 CITO14578 2027 aa11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 SLC2A3P11169 496 aa11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 IRS1P35568 1242 aa11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 KPNA1P52294 538 aaPredicted RBP11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 MRPS5P82675 430 aaKnown RBP11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 PIGHQ14442 188 aaPredicted RBP11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 CLUL1Q15846 466 aa11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 TTC30AQ86WT1 665 aa11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 ZWILCHQ9H900 591 aa11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 RRN3Q9NYV6 651 aa11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 TJP2Q9UDY2 1190 aa11.66□□□□□ -0.54
TNFAIP3-201ENST00000237289 TRIOBPQ9H2D6 2365 aa11.65□□□□□ -0.54
TNFAIP3-201ENST00000237289 TRAV19A0A0A6YYK7 116 aa11.65□□□□□ -0.54
TNFAIP3-201ENST00000237289 MOCS3O95396 460 aa11.65□□□□□ -0.54
TNFAIP3-201ENST00000237289 WDR59Q6PJI9 974 aa11.65□□□□□ -0.54
TNFAIP3-201ENST00000237289 LEMD2Q8NC56 503 aa11.65□□□□□ -0.54
TNFAIP3-201ENST00000237289 ACSF2Q96CM8 615 aaPredicted RBP11.65□□□□□ -0.54
TNFAIP3-201ENST00000237289 CYLDQ9NQC7 956 aa11.65□□□□□ -0.54
TNFAIP3-201ENST00000237289 NOCTQ9UK39 431 aaKnown RBP11.65□□□□□ -0.54
TNFAIP3-201ENST00000237289 ESPNB1AK53 854 aa11.65□□□□□ -0.54
TNFAIP3-201ENST00000237289 TBC1D4O60343 1298 aa11.65□□□□□ -0.54
TNFAIP3-201ENST00000237289 URI1O94763 535 aaPredicted RBP11.65□□□□□ -0.54
TNFAIP3-201ENST00000237289 HNRNPA1P09651 372 aaKnown RBP eCLIP11.65□□□□□ -0.54
TNFAIP3-201ENST00000237289 RARGP13631 454 aa11.65□□□□□ -0.54
TNFAIP3-201ENST00000237289 RGS19P49795 217 aa11.65□□□□□ -0.54
TNFAIP3-201ENST00000237289 COG7P83436 770 aa11.65□□□□□ -0.54
TNFAIP3-201ENST00000237289 CENPCQ03188 943 aa11.65□□□□□ -0.54
TNFAIP3-201ENST00000237289 EFHC2Q5JST6 749 aa11.65□□□□□ -0.54
TNFAIP3-201ENST00000237289 RASIP1Q5U651 963 aa11.65□□□□□ -0.54
TNFAIP3-201ENST00000237289 BSPRYQ5W0U4 402 aa11.65□□□□□ -0.54
TNFAIP3-201ENST00000237289 FAM171BQ6P995 826 aa11.65□□□□□ -0.54
TNFAIP3-201ENST00000237289 PHF13Q86YI8 300 aaPredicted RBP11.65□□□□□ -0.54
TNFAIP3-201ENST00000237289 DEFB106AQ8N104 65 aa11.65□□□□□ -0.54
TNFAIP3-201ENST00000237289 DEFB123Q8N688 67 aa11.65□□□□□ -0.54
TNFAIP3-201ENST00000237289 SFXN1Q9H9B4 322 aa11.65□□□□□ -0.54
TNFAIP3-201ENST00000237289 SMPD4Q9NXE4 827 aa11.65□□□□□ -0.54
TNFAIP3-201ENST00000237289 EPCAMP16422 314 aa11.65□□□□□ -0.55
TNFAIP3-201ENST00000237289 GPD2P43304 727 aa11.65□□□□□ -0.55
TNFAIP3-201ENST00000237289 PPP3CCP48454 512 aa11.65□□□□□ -0.55
TNFAIP3-201ENST00000237289 ZNF132P52740 706 aa11.65□□□□□ -0.55
TNFAIP3-201ENST00000237289 TCEAL5Q5H9L2 206 aa11.65□□□□□ -0.55
TNFAIP3-201ENST00000237289 FAM183BPQ6ZVS7 135 aa11.65□□□□□ -0.55
TNFAIP3-201ENST00000237289 TCEAL8Q8IYN2 117 aa11.65□□□□□ -0.55
TNFAIP3-201ENST00000237289 KCTD6Q8NC69 237 aa11.65□□□□□ -0.55
TNFAIP3-201ENST00000237289 C3orf20Q8ND61 904 aa11.65□□□□□ -0.55
TNFAIP3-201ENST00000237289 MNS1Q8NEH6 495 aa11.65□□□□□ -0.55
TNFAIP3-201ENST00000237289 RXFP2Q8WXD0 754 aa11.65□□□□□ -0.55
TNFAIP3-201ENST00000237289 CPXM1Q96SM3 734 aa11.65□□□□□ -0.55
TNFAIP3-201ENST00000237289 SMOQ99835 787 aa11.65□□□□□ -0.55
TNFAIP3-201ENST00000237289 TMLHEQ9NVH6 421 aa11.65□□□□□ -0.55
TNFAIP3-201ENST00000237289 NUDT5Q9UKK9 219 aa11.65□□□□□ -0.55
TNFAIP3-201ENST00000237289 ADAM12O43184 909 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 TUBB4AP04350 444 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms