RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 VSTM1Q6UX27 236 aa10.15□□□□□ -0.78
CSTF1-201ENST00000217109 SPDL1Q96EA4 605 aa10.15□□□□□ -0.78
CSTF1-201ENST00000217109 OSMRQ99650 979 aa10.15□□□□□ -0.78
CSTF1-201ENST00000217109 SYT11Q9BT88 431 aa10.15□□□□□ -0.78
CSTF1-201ENST00000217109 THTPAQ9BU02 230 aa10.15□□□□□ -0.78
CSTF1-201ENST00000217109 OSBPL1AQ9BXW6 950 aa10.15□□□□□ -0.78
CSTF1-201ENST00000217109 PPCSQ9HAB8 311 aa10.15□□□□□ -0.78
CSTF1-201ENST00000217109 SETD4Q9NVD3 440 aa10.15□□□□□ -0.78
CSTF1-201ENST00000217109 STAP1Q9ULZ2 295 aa10.15□□□□□ -0.78
CSTF1-201ENST00000217109 BARX2Q9UMQ3 279 aaPredicted RBP10.15□□□□□ -0.78
CSTF1-201ENST00000217109 AFG3L2Q9Y4W6 797 aa10.15□□□□□ -0.78
CSTF1-201ENST00000217109 MAFBQ9Y5Q3 323 aaPredicted RBP10.15□□□□□ -0.78
CSTF1-201ENST00000217109 SKIP12755 728 aa10.15□□□□□ -0.79
CSTF1-201ENST00000217109 TAC1P20366 129 aa10.15□□□□□ -0.79
CSTF1-201ENST00000217109 ASPHQ12797 758 aa10.15□□□□□ -0.79
CSTF1-201ENST00000217109 LAMC2Q13753 1193 aa10.15□□□□□ -0.79
CSTF1-201ENST00000217109 SLC1A5Q15758 541 aa10.15□□□□□ -0.79
CSTF1-201ENST00000217109 LRRC36Q1X8D7 754 aa10.15□□□□□ -0.79
CSTF1-201ENST00000217109 MAP7D1Q3KQU3 841 aa10.15□□□□□ -0.79
CSTF1-201ENST00000217109 ZC3H12AQ5D1E8 599 aaKnown RBP10.15□□□□□ -0.79
CSTF1-201ENST00000217109 EFHC2Q5JST6 749 aa10.15□□□□□ -0.79
CSTF1-201ENST00000217109 LRRC38Q5VT99 294 aa10.15□□□□□ -0.79
CSTF1-201ENST00000217109 TTC39BQ5VTQ0 682 aaPredicted RBP10.15□□□□□ -0.79
CSTF1-201ENST00000217109 TMEM192Q8IY95 271 aa10.15□□□□□ -0.79
CSTF1-201ENST00000217109 HACE1Q8IYU2 909 aa10.15□□□□□ -0.79
CSTF1-201ENST00000217109 TTC39CQ8N584 583 aa10.15□□□□□ -0.79
CSTF1-201ENST00000217109 BFARQ9NZS9 450 aa10.15□□□□□ -0.79
CSTF1-201ENST00000217109 DRG1Q9Y295 367 aaKnown RBP10.15□□□□□ -0.79
CSTF1-201ENST00000217109 DDX60LQ5H9U9 1706 aaKnown RBP10.14□□□□□ -0.79
CSTF1-201ENST00000217109 PMM2O15305 246 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 CDKN2BP42772 138 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 NCALDP61601 193 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 GPR162Q16538 588 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 CELF3Q5SZQ8 465 aaKnown RBP10.14□□□□□ -0.79
CSTF1-201ENST00000217109 CHADLQ6NUI6 762 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 RPAINQ86UA6 219 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 SLC26A11Q86WA9 606 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 APPL2Q8NEU8 664 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 TMEM109Q9BVC6 243 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 YIPF3Q9GZM5 350 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 ALOX15BO15296 676 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 OPHN1O60890 802 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 ITGAVP06756 1048 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 CYP2C9P11712 490 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 YY1P25490 414 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 SERPINB3P29508 390 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 GDF10P55107 478 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 SPRED3Q2MJR0 410 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 RIOX2Q8IUF8 465 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 USP33Q8TEY7 942 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 TEPSINQ96N21 525 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 ABCA3Q99758 1704 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 WWP1Q9H0M0 922 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 MAP3K7O43318 606 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 ERBB2P04626 1255 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 ZFXP17010 805 aaPredicted RBP10.14□□□□□ -0.79
CSTF1-201ENST00000217109 CRADDP78560 199 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 STILQ15468 1287 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 BBS12Q6ZW61 710 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 GPRC5AQ8NFJ5 357 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 NSL1Q96IY1 281 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 GPRC5DQ9NZD1 345 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 SLC17A7Q9P2U7 560 aa10.14□□□□□ -0.79
CSTF1-201ENST00000217109 MRPL42Q9Y6G3 142 aaKnown RBP10.14□□□□□ -0.79
CSTF1-201ENST00000217109 SMIM24O75264 130 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 SRGAP2BP0DMP2 458 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 GAD2Q05329 585 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 XRCC4Q13426 336 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 CES3Q6UWW8 571 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 LBX2Q6XYB7 198 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 ZCCHC23Q6ZST2 131 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 RASSF3Q86WH2 238 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 MCUQ8NE86 351 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 TNIP3Q96KP6 325 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 APOL2Q9BQE5 337 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 TMEM120AQ9BXJ8 343 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 B3GNT5Q9BYG0 378 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 RNPEPQ9H4A4 650 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 AP4E1Q9UPM8 1137 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 KIAA1551Q9HCM1 1747 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 XIRP1Q702N8 1843 aaKnown RBP10.13□□□□□ -0.79
CSTF1-201ENST00000217109 COL22A1Q8NFW1 1626 aaPredicted RBP10.13□□□□□ -0.79
CSTF1-201ENST00000217109 GPR25O00155 361 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 SKAP2O75563 359 aaPredicted RBP10.13□□□□□ -0.79
CSTF1-201ENST00000217109 SPAG6O75602 509 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 CTSHP09668 335 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 ACO1P21399 889 aaKnown RBP10.13□□□□□ -0.79
CSTF1-201ENST00000217109 AMPD1P23109 780 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 CYP2F1P24903 491 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 FOXN2P32314 431 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 ADCYAP1R1P41586 468 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 OGDHQ02218 1023 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 PRPSAP1Q14558 356 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 FNBP1LQ5T0N5 605 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 SH3PXD2AQ5TCZ1 1133 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 C6orf89Q6UWU4 347 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 CRELD2Q6UXH1 353 aaPredicted RBP10.13□□□□□ -0.79
CSTF1-201ENST00000217109 PIGWQ7Z7B1 504 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 RSPH3Q86UC2 560 aa10.13□□□□□ -0.79
CSTF1-201ENST00000217109 ECHDC2Q86YB7 292 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms