RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C NTF2P33331 125 aaKnown RBP4.53□□□□□ -1.68
SOD2YHR008C YNL190WP53872 204 aa4.53□□□□□ -1.68
SOD2YHR008C YCR024C-BQ3E7Z8 88 aa4.53□□□□□ -1.68
SOD2YHR008C SPT4P32914 102 aaPredicted RBP4.52□□□□□ -1.69
SOD2YHR008C YPL257WQ08974 193 aa4.52□□□□□ -1.69
SOD2YHR008C YNL162W-AQ3E7A8 72 aa4.52□□□□□ -1.69
SOD2YHR008C YBR298C-AQ8TGK4 73 aa4.52□□□□□ -1.69
SOD2YHR008C DUT1P33317 147 aa4.51□□□□□ -1.69
SOD2YHR008C YLR112WQ12130 139 aa4.51□□□□□ -1.69
SOD2YHR008C YNL042W-BQ3E7Z2 85 aa4.51□□□□□ -1.69
SOD2YHR008C YML079WQ03629 201 aa4.5□□□□□ -1.69
SOD2YHR008C QCR8P08525 94 aa4.49□□□□□ -1.69
SOD2YHR008C SRB6P32570 121 aa4.49□□□□□ -1.69
SOD2YHR008C YLL006W-AQ3E814 58 aa4.49□□□□□ -1.69
SOD2YHR008C PEX17P40155 199 aa4.47□□□□□ -1.69
SOD2YHR008C YNL122CP53921 115 aaPredicted RBP4.47□□□□□ -1.69
SOD2YHR008C ATP14Q12349 124 aa4.47□□□□□ -1.69
SOD2YHR008C UGX2P32772 223 aa4.46□□□□□ -1.7
SOD2YHR008C RPL18AP0CX49 186 aaKnown RBP4.45□□□□□ -1.7
SOD2YHR008C RPL18BP0CX50 186 aaKnown RBP4.45□□□□□ -1.7
SOD2YHR008C GSP1P32835 219 aaKnown RBP4.45□□□□□ -1.7
SOD2YHR008C AIM11P87275 137 aa4.45□□□□□ -1.7
SOD2YHR008C YOR020W-AQ3E824 90 aa4.45□□□□□ -1.7
SOD2YHR008C YHL005CP38752 130 aa4.44□□□□□ -1.7
SOD2YHR008C FMP16Q12497 93 aa4.44□□□□□ -1.7
SOD2YHR008C HTL1Q9URQ5 78 aa4.44□□□□□ -1.7
SOD2YHR008C RPL26AP05743 127 aaKnown RBP4.43□□□□□ -1.7
SOD2YHR008C UBC11P52492 156 aa4.43□□□□□ -1.7
SOD2YHR008C YGL118CP53132 145 aa4.43□□□□□ -1.7
SOD2YHR008C RPL26BP53221 127 aaKnown RBP4.43□□□□□ -1.7
SOD2YHR008C YBR027CP38220 110 aa4.42□□□□□ -1.7
SOD2YHR008C YPL073CP40323 161 aa4.42□□□□□ -1.7
SOD2YHR008C RPL27BP0C2H7 136 aaKnown RBP4.41□□□□□ -1.7
SOD2YHR008C YCR043CP25361 127 aa4.41□□□□□ -1.7
SOD2YHR008C YEL045CP32616 141 aa4.41□□□□□ -1.7
SOD2YHR008C BSC4P53841 131 aa4.41□□□□□ -1.7
SOD2YHR008C HPA2Q06592 156 aa4.41□□□□□ -1.7
SOD2YHR008C MRPL11P36521 249 aaPredicted RBP4.4□□□□□ -1.71
SOD2YHR008C YMR103CQ04436 120 aa4.4□□□□□ -1.71
SOD2YHR008C YMR230W-AQ3E7B5 62 aa4.4□□□□□ -1.71
SOD2YHR008C YBR230W-AQ3E762 66 aa4.39□□□□□ -1.71
SOD2YHR008C YJL127C-BQ3E828 52 aa4.38□□□□□ -1.71
SOD2YHR008C COX7P10174 60 aa4.37□□□□□ -1.71
SOD2YHR008C VMA21P41806 77 aa4.37□□□□□ -1.71
SOD2YHR008C MRPS12P53732 153 aa4.36□□□□□ -1.71
SOD2YHR008C YHR007C-AQ07074 71 aa4.36□□□□□ -1.71
SOD2YHR008C YOR072WQ08486 104 aa4.35□□□□□ -1.71
SOD2YHR008C YDL022C-AP0C5L6 82 aa4.34□□□□□ -1.71
SOD2YHR008C GSP2P32836 220 aaKnown RBP4.34□□□□□ -1.71
SOD2YHR008C YLR236CA0A023PZG4 107 aa4.33□□□□□ -1.72
SOD2YHR008C YCR007CP25354 239 aa4.33□□□□□ -1.72
SOD2YHR008C ATG8P38182 117 aaRIP-Chip data4.33□□□□□ -1.72not detected
SOD2YHR008C FYV5P25585 152 aa4.32□□□□□ -1.72
SOD2YHR008C POP3P53833 195 aaPredicted RBP4.32□□□□□ -1.72
SOD2YHR008C RPL28P02406 149 aaKnown RBP4.31□□□□□ -1.72
SOD2YHR008C YKR041WP36134 250 aa4.31□□□□□ -1.72
SOD2YHR008C YPL261CQ08976 102 aa4.31□□□□□ -1.72
SOD2YHR008C ICY1Q04329 127 aa4.3□□□□□ -1.72
SOD2YHR008C FYV12Q08559 129 aa4.29□□□□□ -1.72
SOD2YHR008C PAU17Q12370 124 aa4.29□□□□□ -1.72
SOD2YHR008C ATP5P09457 212 aa4.28□□□□□ -1.72
SOD2YHR008C MSA2P36157 363 aa4.28□□□□□ -1.72
SOD2YHR008C CYT2Q00873 224 aa4.28□□□□□ -1.72
SOD2YHR008C FYV4P38783 130 aaPredicted RBP4.27□□□□□ -1.73
SOD2YHR008C RGM1Q00453 211 aa4.27□□□□□ -1.73
SOD2YHR008C IRC21Q04772 201 aa4.27□□□□□ -1.73
SOD2YHR008C YNL184CP53876 108 aa4.26□□□□□ -1.73
SOD2YHR008C RPL36BO14455 100 aaKnown RBP4.25□□□□□ -1.73
SOD2YHR008C YEL067CP39978 195 aa4.25□□□□□ -1.73
SOD2YHR008C Q0017Q9ZZX8 53 aa4.25□□□□□ -1.73
SOD2YHR008C YHR139C-AO13536 103 aa4.21□□□□□ -1.74
SOD2YHR008C BET1P22804 142 aa4.21□□□□□ -1.74
SOD2YHR008C YER134CP40081 178 aa4.21□□□□□ -1.74
SOD2YHR008C YIA6P40556 373 aa4.19□□□□□ -1.74
SOD2YHR008C IGO2Q9P305 131 aa4.19□□□□□ -1.74
SOD2YHR008C YDR210WQ03482 75 aa4.18□□□□□ -1.74
SOD2YHR008C RPS29AP41057 56 aaKnown RBP4.17□□□□□ -1.74
SOD2YHR008C SFT1P43682 97 aa4.17□□□□□ -1.74
SOD2YHR008C HHO1P53551 258 aa4.16□□□□□ -1.74
SOD2YHR008C YLR157W-DP0CE99 70 aa4.15□□□□□ -1.75
SOD2YHR008C YLR050CQ12155 161 aaKnown RBP4.14□□□□□ -1.75
SOD2YHR008C YOL097W-AQ3E7Y9 61 aa4.14□□□□□ -1.75
SOD2YHR008C YNR077CP53758 84 aa4.13□□□□□ -1.75
SOD2YHR008C ARL3Q02804 198 aa4.13□□□□□ -1.75
SOD2YHR008C SCS22Q6Q595 175 aa4.13□□□□□ -1.75
SOD2YHR008C YKL069WP36088 180 aa4.12□□□□□ -1.75
SOD2YHR008C SOH1P38633 127 aa4.12□□□□□ -1.75
SOD2YHR008C FUN14P18411 198 aa4.11□□□□□ -1.75
SOD2YHR008C NSE4P43124 402 aa4.11□□□□□ -1.75
SOD2YHR008C YJR128WP47162 119 aa4.11□□□□□ -1.75
SOD2YHR008C RSM18P40033 138 aa4.1□□□□□ -1.75
SOD2YHR008C PAU23Q07987 124 aa4.1□□□□□ -1.75
SOD2YHR008C YDL157CQ12082 118 aa4.1□□□□□ -1.75
SOD2YHR008C FYV7Q12247 151 aa4.1□□□□□ -1.75
SOD2YHR008C MID2P36027 376 aa4.09□□□□□ -1.75
SOD2YHR008C YKL044WP36092 106 aa4.09□□□□□ -1.75
SOD2YHR008C RPS29BP41058 56 aaKnown RBP4.09□□□□□ -1.75
SOD2YHR008C OST2P46964 130 aa4.09□□□□□ -1.75
SOD2YHR008C ZEO1Q08245 113 aa4.08□□□□□ -1.76
SOD2YHR008C CWC27Q02770 301 aa4.06□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms