RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W ARL3Q02804 198 aa4.03□□□□□ -1.76
MSP1YGR028W HTL1Q9URQ5 78 aa4.03□□□□□ -1.76
MSP1YGR028W RPL27BP0C2H7 136 aaKnown RBP4.02□□□□□ -1.77
MSP1YGR028W HAC1P41546 238 aa4.02□□□□□ -1.77
MSP1YGR028W RPL18AP0CX49 186 aaKnown RBP4.01□□□□□ -1.77
MSP1YGR028W RPL18BP0CX50 186 aaKnown RBP4.01□□□□□ -1.77
MSP1YGR028W HYP2P23301 157 aaKnown RBP4.01□□□□□ -1.77
MSP1YGR028W TOA2P32774 122 aa4.01□□□□□ -1.77
MSP1YGR028W MVB12P42939 101 aa4.01□□□□□ -1.77
MSP1YGR028W IGD1P43598 195 aa4.01□□□□□ -1.77
MSP1YGR028W YGL149WP53116 101 aa4.01□□□□□ -1.77
MSP1YGR028W ABF2Q02486 183 aa4.01□□□□□ -1.77
MSP1YGR028W MHR1Q06630 226 aa4.01□□□□□ -1.77
MSP1YGR028W YDL022C-AP0C5L6 82 aa4□□□□□ -1.77
MSP1YGR028W ATP16Q12165 160 aa4□□□□□ -1.77
MSP1YGR028W STF1P01098 86 aa3.99□□□□□ -1.77
MSP1YGR028W YPL261CQ08976 102 aa3.99□□□□□ -1.77
MSP1YGR028W YBL039W-BP0C268 59 aa3.98□□□□□ -1.77
MSP1YGR028W YFL019CP43576 117 aa3.98□□□□□ -1.77
MSP1YGR028W ADH1P00330 348 aaKnown RBP3.97□□□□□ -1.77
MSP1YGR028W RPL28P02406 149 aaKnown RBP3.97□□□□□ -1.77
MSP1YGR028W PEX17P40155 199 aa3.97□□□□□ -1.77
MSP1YGR028W SCS22Q6Q595 175 aa3.97□□□□□ -1.77
MSP1YGR028W YLR156WP0CE96 114 aa3.96□□□□□ -1.78
MSP1YGR028W YLR159WP0CE97 114 aa3.96□□□□□ -1.78
MSP1YGR028W YLR161WP0CE98 114 aa3.96□□□□□ -1.78
MSP1YGR028W YGL193CP53097 103 aa3.96□□□□□ -1.78
MSP1YGR028W YLL006W-AQ3E814 58 aa3.96□□□□□ -1.78
MSP1YGR028W YKR041WP36134 250 aa3.95□□□□□ -1.78
MSP1YGR028W MRPS12P53732 153 aa3.95□□□□□ -1.78
MSP1YGR028W YNL190WP53872 204 aa3.95□□□□□ -1.78
MSP1YGR028W CGR1P53188 120 aa3.94□□□□□ -1.78
MSP1YGR028W YML079WQ03629 201 aa3.94□□□□□ -1.78
MSP1YGR028W MBF1O14467 151 aaKnown RBP3.93□□□□□ -1.78
MSP1YGR028W QCR8P08525 94 aa3.93□□□□□ -1.78
MSP1YGR028W YEL067CP39978 195 aa3.93□□□□□ -1.78
MSP1YGR028W KNH1P50112 268 aa3.93□□□□□ -1.78
MSP1YGR028W SEN15Q04675 128 aa3.92□□□□□ -1.78
MSP1YGR028W YOR268CQ08734 132 aa3.92□□□□□ -1.78
MSP1YGR028W MRPL11P36521 249 aaPredicted RBP3.91□□□□□ -1.78
MSP1YGR028W LSO2Q3E772 92 aaKnown RBP3.91□□□□□ -1.78
MSP1YGR028W HAP3P13434 144 aa3.9□□□□□ -1.79
MSP1YGR028W MID2P36027 376 aa3.9□□□□□ -1.79
MSP1YGR028W YKL023C-AQ2V2P3 75 aa3.9□□□□□ -1.79
MSP1YGR028W UBC4P15731 148 aa3.89□□□□□ -1.79
MSP1YGR028W SCM4P32564 187 aa3.89□□□□□ -1.79
MSP1YGR028W UGX2P32772 223 aa3.89□□□□□ -1.79
MSP1YGR028W SSS1P35179 80 aa3.89□□□□□ -1.79
MSP1YGR028W HPA2Q06592 156 aa3.89□□□□□ -1.79
MSP1YGR028W YLR050CQ12155 161 aaKnown RBP3.89□□□□□ -1.79
MSP1YGR028W YIL134C-AQ45U18 67 aa3.89□□□□□ -1.79
MSP1YGR028W RPL29P05747 59 aaPredicted RBP3.88□□□□□ -1.79
MSP1YGR028W EDC2P40023 145 aaPredicted RBP3.88□□□□□ -1.79
MSP1YGR028W YNR077CP53758 84 aa3.88□□□□□ -1.79
MSP1YGR028W CUE4Q04201 117 aaPredicted RBP3.88□□□□□ -1.79
MSP1YGR028W KTI11Q3E840 82 aa3.88□□□□□ -1.79
MSP1YGR028W SEC11P15367 167 aa3.87□□□□□ -1.79
MSP1YGR028W MRPL44P19956 98 aa3.87□□□□□ -1.79
MSP1YGR028W YPL073CP40323 161 aa3.87□□□□□ -1.79
MSP1YGR028W YFR057WP43625 151 aa3.87□□□□□ -1.79
MSP1YGR028W DDR2P89113 61 aa3.87□□□□□ -1.79
MSP1YGR028W CNL1Q06333 122 aa3.87□□□□□ -1.79
MSP1YGR028W IGO2Q9P305 131 aa3.87□□□□□ -1.79
MSP1YGR028W ATP5P09457 212 aa3.86□□□□□ -1.79
MSP1YGR028W YER039C-AP0CD97 72 aa3.86□□□□□ -1.79
MSP1YGR028W YKL044WP36092 106 aa3.85□□□□□ -1.79
MSP1YGR028W YPL257WQ08974 193 aa3.85□□□□□ -1.79
MSP1YGR028W YOR020W-AQ3E824 90 aa3.85□□□□□ -1.79
MSP1YGR028W MSL1P40567 111 aaPredicted RBP3.84□□□□□ -1.79
MSP1YGR028W YNL042W-BQ3E7Z2 85 aa3.84□□□□□ -1.79
MSP1YGR028W LSM8P47093 109 aaKnown RBP3.83□□□□□ -1.8
MSP1YGR028W YJR085CP47131 105 aaKnown RBP3.83□□□□□ -1.8
MSP1YGR028W SPG1P50088 95 aa3.83□□□□□ -1.8
MSP1YGR028W YGL230CP53074 147 aa3.83□□□□□ -1.8
MSP1YGR028W RPL26AP05743 127 aaKnown RBP3.82□□□□□ -1.8
MSP1YGR028W KRE1P17260 313 aa3.82□□□□□ -1.8
MSP1YGR028W YIA6P40556 373 aa3.82□□□□□ -1.8
MSP1YGR028W RPL26BP53221 127 aaKnown RBP3.82□□□□□ -1.8
MSP1YGR028W YBR230W-AQ3E762 66 aa3.82□□□□□ -1.8
MSP1YGR028W YJL127C-BQ3E828 52 aa3.82□□□□□ -1.8
MSP1YGR028W BSC4P53841 131 aa3.81□□□□□ -1.8
MSP1YGR028W IRC21Q04772 201 aa3.81□□□□□ -1.8
MSP1YGR028W PAU17Q12370 124 aa3.81□□□□□ -1.8
MSP1YGR028W YGR121W-AQ3E816 71 aa3.81□□□□□ -1.8
MSP1YGR028W SPT4P32914 102 aaPredicted RBP3.8□□□□□ -1.8
MSP1YGR028W RGM1Q00453 211 aa3.79□□□□□ -1.8
MSP1YGR028W ICY1Q04329 127 aa3.79□□□□□ -1.8
MSP1YGR028W YHR007C-AQ07074 71 aa3.79□□□□□ -1.8
MSP1YGR028W YOR034C-AQ3E735 80 aa3.79□□□□□ -1.8
MSP1YGR028W KSH1Q8TGJ3 72 aa3.79□□□□□ -1.8
MSP1YGR028W COX10P21592 462 aa3.78□□□□□ -1.8
MSP1YGR028W YDL157CQ12082 118 aa3.78□□□□□ -1.8
MSP1YGR028W CMC4Q3E7A9 73 aa3.78□□□□□ -1.8
MSP1YGR028W COA6Q3E846 104 aa3.78□□□□□ -1.8
MSP1YGR028W FYV5P25585 152 aa3.76□□□□□ -1.81
MSP1YGR028W YBR027CP38220 110 aa3.76□□□□□ -1.81
MSP1YGR028W NAT5Q08689 176 aa3.76□□□□□ -1.81
MSP1YGR028W MRPL24P36525 258 aaPredicted RBP3.74□□□□□ -1.81
MSP1YGR028W YOR072WQ08486 104 aa3.74□□□□□ -1.81
MSP1YGR028W YLR236CA0A023PZG4 107 aa3.73□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms