RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 LPPQ93052 612 aa15.83■□□□□ 0.13
TRIM3-215ENST00000639856 NKD2Q969F2 451 aaPredicted RBP15.83■□□□□ 0.13
TRIM3-215ENST00000639856 PWWP2AQ96N64 755 aa15.83■□□□□ 0.13
TRIM3-215ENST00000639856 XPO6Q96QU8 1125 aaKnown RBP15.83■□□□□ 0.13
TRIM3-215ENST00000639856 SELENOSQ9BQE4 189 aa15.83■□□□□ 0.13
TRIM3-215ENST00000639856 FAM124BQ9H5Z6 455 aaPredicted RBP15.83■□□□□ 0.13
TRIM3-215ENST00000639856 METTL5Q9NRN9 209 aaKnown RBP15.83■□□□□ 0.13
TRIM3-215ENST00000639856 NINJ2Q9NZG7 142 aa15.83■□□□□ 0.13
TRIM3-215ENST00000639856 CACNG4Q9UBN1 327 aa15.83■□□□□ 0.13
TRIM3-215ENST00000639856 GGA2Q9UJY4 613 aa15.83■□□□□ 0.13
TRIM3-215ENST00000639856 C3orf70A6NLC5 250 aaPredicted RBP15.83■□□□□ 0.12
TRIM3-215ENST00000639856 INHAP05111 366 aa15.83■□□□□ 0.12
TRIM3-215ENST00000639856 GHRP10912 638 aa15.83■□□□□ 0.12
TRIM3-215ENST00000639856 CD52P31358 61 aa15.83■□□□□ 0.12
TRIM3-215ENST00000639856 GPD2P43304 727 aa15.83■□□□□ 0.12
TRIM3-215ENST00000639856 VCPP55072 806 aaKnown RBP15.83■□□□□ 0.12
TRIM3-215ENST00000639856 HADHQ16836 314 aaKnown RBP15.83■□□□□ 0.12
TRIM3-215ENST00000639856 SOWAHAQ2M3V2 549 aa15.83■□□□□ 0.12
TRIM3-215ENST00000639856 FBXO47Q5MNV8 452 aa15.83■□□□□ 0.12
TRIM3-215ENST00000639856 CEP128Q6ZU80 1094 aa15.83■□□□□ 0.12
TRIM3-215ENST00000639856 MICALCLQ6ZW33 695 aa15.83■□□□□ 0.12
TRIM3-215ENST00000639856 RNF180Q86T96 592 aa15.83■□□□□ 0.12
TRIM3-215ENST00000639856 GLIS1Q8NBF1 620 aa15.83■□□□□ 0.12
TRIM3-215ENST00000639856 UBA3Q8TBC4 463 aa15.83■□□□□ 0.12
TRIM3-215ENST00000639856 MCRS1Q96EZ8 462 aa15.83■□□□□ 0.12
TRIM3-215ENST00000639856 LPIN3Q9BQK8 851 aa15.83■□□□□ 0.12
TRIM3-215ENST00000639856 NT5C1AQ9BXI3 368 aa15.83■□□□□ 0.12
TRIM3-215ENST00000639856 FAM105AQ9NUU6 356 aa15.83■□□□□ 0.12
TRIM3-215ENST00000639856 DNALI1O14645 258 aaPredicted RBP15.82■□□□□ 0.12
TRIM3-215ENST00000639856 TCEA3O75764 348 aa15.82■□□□□ 0.12
TRIM3-215ENST00000639856 ITGAVP06756 1048 aa15.82■□□□□ 0.12
TRIM3-215ENST00000639856 IGFBP6P24592 240 aaPredicted RBP15.82■□□□□ 0.12
TRIM3-215ENST00000639856 IL1R2P27930 398 aa15.82■□□□□ 0.12
TRIM3-215ENST00000639856 MAP2K2P36507 400 aa15.82■□□□□ 0.12
TRIM3-215ENST00000639856 ZNF618Q5T7W0 954 aa15.82■□□□□ 0.12
TRIM3-215ENST00000639856 ACOT1Q86TX2 421 aa15.82■□□□□ 0.12
TRIM3-215ENST00000639856 RPAINQ86UA6 219 aa15.82■□□□□ 0.12
TRIM3-215ENST00000639856 ZCCHC9Q8N567 271 aaKnown RBP15.82■□□□□ 0.12
TRIM3-215ENST00000639856 EMC1Q8N766 993 aa15.82■□□□□ 0.12
TRIM3-215ENST00000639856 IPO4Q8TEX9 1081 aaKnown RBP15.82■□□□□ 0.12
TRIM3-215ENST00000639856 ZWILCHQ9H900 591 aa15.82■□□□□ 0.12
TRIM3-215ENST00000639856 C5orf60A6NFR6 353 aa15.82■□□□□ 0.12
TRIM3-215ENST00000639856 CD4P01730 458 aa15.82■□□□□ 0.12
TRIM3-215ENST00000639856 MLH1P40692 756 aa15.82■□□□□ 0.12
TRIM3-215ENST00000639856 MAGEA9P43362 315 aa15.82■□□□□ 0.12
TRIM3-215ENST00000639856 ARSEP51690 589 aa15.82■□□□□ 0.12
TRIM3-215ENST00000639856 ACAP1Q15027 740 aa15.82■□□□□ 0.12
TRIM3-215ENST00000639856 SMTNL2Q2TAL5 461 aa15.82■□□□□ 0.12
TRIM3-215ENST00000639856 EXOC3L1Q86VI1 746 aa15.82■□□□□ 0.12
TRIM3-215ENST00000639856 TTC39CQ8N584 583 aa15.82■□□□□ 0.12
TRIM3-215ENST00000639856 PXYLP1Q8TE99 480 aa15.82■□□□□ 0.12
TRIM3-215ENST00000639856 ZNF296Q8WUU4 475 aaPredicted RBP15.82■□□□□ 0.12
TRIM3-215ENST00000639856 ATXN2LQ8WWM7 1075 aaKnown RBP15.82■□□□□ 0.12
TRIM3-215ENST00000639856 HAUS1Q96CS2 278 aa15.82■□□□□ 0.12
TRIM3-215ENST00000639856 DPEP3Q9H4B8 488 aa15.82■□□□□ 0.12
TRIM3-215ENST00000639856 FAM49BQ9NUQ9 324 aa15.82■□□□□ 0.12
TRIM3-215ENST00000639856 TSPAN16Q9UKR8 245 aa15.82■□□□□ 0.12
TRIM3-215ENST00000639856 FRMPD3Q5JV73 1810 aa15.81■□□□□ 0.12
TRIM3-215ENST00000639856 KPNA7A9QM74 516 aa15.81■□□□□ 0.12
TRIM3-215ENST00000639856 MGEA5O60502 916 aa15.81■□□□□ 0.12
TRIM3-215ENST00000639856 ZSCAN5DPP0CG00 497 aa15.81■□□□□ 0.12
TRIM3-215ENST00000639856 FGFR1P11362 822 aa15.81■□□□□ 0.12
TRIM3-215ENST00000639856 IBSPP21815 317 aaPredicted RBP15.81■□□□□ 0.12
TRIM3-215ENST00000639856 ATP5DP30049 168 aa15.81■□□□□ 0.12
TRIM3-215ENST00000639856 TAZQ16635 292 aa15.81■□□□□ 0.12
TRIM3-215ENST00000639856 GSTCDQ8NEC7 633 aa15.81■□□□□ 0.12
TRIM3-215ENST00000639856 OR6B3Q8NGW1 331 aa15.81■□□□□ 0.12
TRIM3-215ENST00000639856 SLC35B2Q8TB61 432 aa15.81■□□□□ 0.12
TRIM3-215ENST00000639856 KBTBD7Q8WVZ9 684 aa15.81■□□□□ 0.12
TRIM3-215ENST00000639856 PPP1R10Q96QC0 940 aaKnown RBP15.81■□□□□ 0.12
TRIM3-215ENST00000639856 RBM15Q96T37 977 aaKnown RBP eCLIP15.81■□□□□ 0.12
TRIM3-215ENST00000639856 GAD1Q99259 594 aa15.81■□□□□ 0.12
TRIM3-215ENST00000639856 RASSF4Q9H2L5 321 aa15.81■□□□□ 0.12
TRIM3-215ENST00000639856 INTS9Q9NV88 658 aaKnown RBP15.81■□□□□ 0.12
TRIM3-215ENST00000639856 KIAA1257Q9ULG3 409 aa15.81■□□□□ 0.12
TRIM3-215ENST00000639856 PADI3Q9ULW8 664 aa15.81■□□□□ 0.12
TRIM3-215ENST00000639856 NOD1Q9Y239 953 aa15.81■□□□□ 0.12
TRIM3-215ENST00000639856 PIK3R2O00459 728 aa15.8■□□□□ 0.12
TRIM3-215ENST00000639856 KDELR1P24390 212 aa15.8■□□□□ 0.12
TRIM3-215ENST00000639856 LPIN1Q14693 890 aa15.8■□□□□ 0.12
TRIM3-215ENST00000639856 QPCTQ16769 361 aa15.8■□□□□ 0.12
TRIM3-215ENST00000639856 TRIM71Q2Q1W2 868 aaKnown RBP15.8■□□□□ 0.12
TRIM3-215ENST00000639856 KCNT1Q5JUK3 1230 aa15.8■□□□□ 0.12
TRIM3-215ENST00000639856 PPP1R26Q5T8A7 1209 aaPredicted RBP15.8■□□□□ 0.12
TRIM3-215ENST00000639856 LHX8Q68G74 356 aa15.8■□□□□ 0.12
TRIM3-215ENST00000639856 ZNF784Q8NCA9 323 aaPredicted RBP15.8■□□□□ 0.12
TRIM3-215ENST00000639856 CHMP6Q96FZ7 201 aa15.8■□□□□ 0.12
TRIM3-215ENST00000639856 A0A087WUV0 522 aaPredicted RBP15.8■□□□□ 0.12
TRIM3-215ENST00000639856 GPR182O15218 404 aa15.8■□□□□ 0.12
TRIM3-215ENST00000639856 XPOTO43592 962 aaKnown RBP15.8■□□□□ 0.12
TRIM3-215ENST00000639856 RNF8O76064 485 aa15.8■□□□□ 0.12
TRIM3-215ENST00000639856 PFKMP08237 780 aa15.8■□□□□ 0.12
TRIM3-215ENST00000639856 ETS1P14921 441 aa15.8■□□□□ 0.12
TRIM3-215ENST00000639856 PLCB3Q01970 1234 aa15.8■□□□□ 0.12
TRIM3-215ENST00000639856 GPS1Q13098 491 aa15.8■□□□□ 0.12
TRIM3-215ENST00000639856 GOLGA7BQ2TAP0 167 aa15.8■□□□□ 0.12
TRIM3-215ENST00000639856 CCDC38Q502W7 563 aa15.8■□□□□ 0.12
TRIM3-215ENST00000639856 BBS12Q6ZW61 710 aa15.8■□□□□ 0.12
TRIM3-215ENST00000639856 YTHDF3Q7Z739 585 aaKnown RBP15.8■□□□□ 0.12
TRIM3-215ENST00000639856 TTC13Q8NBP0 860 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms