RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 MRPS17Q9Y2R5 130 aaKnown RBP4.04□□□□□ -1.76
SRP54-214ENST00000630962 MANSC4A6NHS7 340 aaPredicted RBP4.03□□□□□ -1.76
SRP54-214ENST00000630962 INO80B-WBP1J3KQ70 363 aa4.03□□□□□ -1.76
SRP54-214ENST00000630962 TPP1O14773 563 aa4.03□□□□□ -1.76
SRP54-214ENST00000630962 TUBB4AP04350 444 aa4.03□□□□□ -1.76
SRP54-214ENST00000630962 CELA2AP08217 269 aa4.03□□□□□ -1.76
SRP54-214ENST00000630962 PDHA1P08559 390 aa4.03□□□□□ -1.76
SRP54-214ENST00000630962 ZKSCAN1P17029 563 aaPredicted RBP4.03□□□□□ -1.76
SRP54-214ENST00000630962 PROK1P58294 105 aa4.03□□□□□ -1.76
SRP54-214ENST00000630962 PROSER3Q2NL68 480 aa4.03□□□□□ -1.76
SRP54-214ENST00000630962 PRAMEF17Q5VTA0 474 aa4.03□□□□□ -1.76
SRP54-214ENST00000630962 APOA5Q6Q788 366 aa4.03□□□□□ -1.76
SRP54-214ENST00000630962 MICU3Q86XE3 530 aa4.03□□□□□ -1.76
SRP54-214ENST00000630962 ZNF280BQ86YH2 543 aa4.03□□□□□ -1.76
SRP54-214ENST00000630962 TERB1Q8NA31 727 aa4.03□□□□□ -1.76
SRP54-214ENST00000630962 SMG7Q92540 1137 aaKnown RBP4.03□□□□□ -1.76
SRP54-214ENST00000630962 ASB2Q96Q27 587 aa4.03□□□□□ -1.76
SRP54-214ENST00000630962 THAP7Q9BT49 309 aaPredicted RBP4.03□□□□□ -1.76
SRP54-214ENST00000630962 G3BP2Q9UN86 482 aaKnown RBP4.03□□□□□ -1.76
SRP54-214ENST00000630962 ZNF804BA4D1E1 1349 aa4.02□□□□□ -1.77
SRP54-214ENST00000630962 FRMPD2Q68DX3 1309 aaPredicted RBP4.02□□□□□ -1.77
SRP54-214ENST00000630962 VSTM5A8MXK1 200 aa4.02□□□□□ -1.77
SRP54-214ENST00000630962 ZNF213O14771 459 aa4.02□□□□□ -1.77
SRP54-214ENST00000630962 CD3EAPO15446 510 aaKnown RBP4.02□□□□□ -1.77
SRP54-214ENST00000630962 TMPRSS11DO60235 418 aa4.02□□□□□ -1.77
SRP54-214ENST00000630962 SNX2O60749 519 aa4.02□□□□□ -1.77
SRP54-214ENST00000630962 RASAL1O95294 804 aa4.02□□□□□ -1.77
SRP54-214ENST00000630962 MAP4K4O95819 1239 aaPredicted RBP4.02□□□□□ -1.77
SRP54-214ENST00000630962 ATF3P18847 181 aa4.02□□□□□ -1.77
SRP54-214ENST00000630962 LMO1P25800 156 aa4.02□□□□□ -1.77
SRP54-214ENST00000630962 PEX2P28328 305 aa4.02□□□□□ -1.77
SRP54-214ENST00000630962 GKP32189 559 aa4.02□□□□□ -1.77
SRP54-214ENST00000630962 FMO1Q01740 532 aa4.02□□□□□ -1.77
SRP54-214ENST00000630962 LRRC41Q15345 812 aa4.02□□□□□ -1.77
SRP54-214ENST00000630962 ST3GAL2Q16842 350 aa4.02□□□□□ -1.77
SRP54-214ENST00000630962 L1TD1Q5T7N2 865 aaKnown RBP4.02□□□□□ -1.77
SRP54-214ENST00000630962 CACHD1Q5VU97 1274 aa4.02□□□□□ -1.77
SRP54-214ENST00000630962 FAM156AQ8NDB6 213 aa4.02□□□□□ -1.77
SRP54-214ENST00000630962 ADAMTS18Q8TE60 1221 aa4.02□□□□□ -1.77
SRP54-214ENST00000630962 REPS1Q96D71 796 aa4.02□□□□□ -1.77
SRP54-214ENST00000630962 ZC3H10Q96K80 434 aaKnown RBP4.02□□□□□ -1.77
SRP54-214ENST00000630962 C17orf80Q9BSJ5 609 aa4.02□□□□□ -1.77
SRP54-214ENST00000630962 VN1R3Q9BXE9 311 aa4.02□□□□□ -1.77
SRP54-214ENST00000630962 UNKQ9C0B0 810 aaKnown RBP4.02□□□□□ -1.77
SRP54-214ENST00000630962 OBP2AQ9NY56 170 aa4.02□□□□□ -1.77
SRP54-214ENST00000630962 CPNE7Q9UBL6 633 aa4.02□□□□□ -1.77
SRP54-214ENST00000630962 NKX1-2Q9UD57 310 aaPredicted RBP4.02□□□□□ -1.77
SRP54-214ENST00000630962 SERGEFQ9UGK8 458 aa4.02□□□□□ -1.77
SRP54-214ENST00000630962 HDAC9Q9UKV0 1011 aa4.02□□□□□ -1.77
SRP54-214ENST00000630962 DRG1Q9Y295 367 aaKnown RBP4.02□□□□□ -1.77
SRP54-214ENST00000630962 USP19O94966 1318 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 WIPF3A6NGB9 483 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 PRRT4C9JH25 899 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 PPP6CO00743 305 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 PPM1GO15355 546 aaPredicted RBP4.01□□□□□ -1.77
SRP54-214ENST00000630962 SRGAP2O75044 1071 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 PMPCBO75439 489 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 LATS1O95835 1130 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 TXNP10599 105 aaKnown RBP4.01□□□□□ -1.77
SRP54-214ENST00000630962 TPH1P17752 444 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 RHCEP18577 417 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 ACVR2AP27037 513 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 ADORA2AP29274 412 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 ABCG1P45844 678 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 CPT1AP50416 773 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 TIRAPP58753 221 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 CYP4F2P78329 520 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 TIAL1Q01085 375 aaKnown RBP eCLIP4.01□□□□□ -1.77
SRP54-214ENST00000630962 RHDQ02161 417 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 TFF2Q03403 129 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 ZIK1Q3SY52 487 aaPredicted RBP4.01□□□□□ -1.77
SRP54-214ENST00000630962 SLC9A4Q6AI14 798 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 SERPINA13PQ6UXR4 307 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 NAPRTQ6XQN6 538 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 PTCHD4Q6ZW05 846 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 C11orf96Q7Z7L8 435 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 RAVER1Q8IY67 606 aaKnown RBP4.01□□□□□ -1.77
SRP54-214ENST00000630962 OR56A3Q8NH54 315 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 TTC8Q8TAM2 541 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 DPF1Q92782 380 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 ZDHHC12Q96GR4 267 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 VPS50Q96JG6 964 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 CCDC136Q96JN2 1154 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 CCDC17Q96LX7 622 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 STK31Q9BXU1 1019 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 GBA2Q9HCG7 927 aaPredicted RBP4.01□□□□□ -1.77
SRP54-214ENST00000630962 DNMT3BQ9UBC3 853 aaKnown RBP4.01□□□□□ -1.77
SRP54-214ENST00000630962 SNX14Q9Y5W7 946 aa4.01□□□□□ -1.77
SRP54-214ENST00000630962 A8MVJ9 347 aa4□□□□□ -1.77
SRP54-214ENST00000630962 TMEM232C9JQI7 657 aa4□□□□□ -1.77
SRP54-214ENST00000630962 CES2O00748 559 aa4□□□□□ -1.77
SRP54-214ENST00000630962 THAP12O43422 761 aa4□□□□□ -1.77
SRP54-214ENST00000630962 RRP9O43818 475 aaKnown RBP4□□□□□ -1.77
SRP54-214ENST00000630962 EXOC3O60645 756 aa4□□□□□ -1.77
SRP54-214ENST00000630962 PIAS2O75928 621 aa4□□□□□ -1.77
SRP54-214ENST00000630962 RNF8O76064 485 aa4□□□□□ -1.77
SRP54-214ENST00000630962 FGAP02671 866 aa4□□□□□ -1.77
SRP54-214ENST00000630962 MYBP10242 640 aa4□□□□□ -1.77
SRP54-214ENST00000630962 KELP23276 732 aa4□□□□□ -1.77
SRP54-214ENST00000630962 IL1R2P27930 398 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms