RNA–Protein interactions for RNA: ENST00000622464.4

AGAP3-226, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-226ENST00000622464 TNPO2O14787 897 aaKnown RBP13.7□□□□□ -0.22
AGAP3-226ENST00000622464 PAPSS1O43252 624 aaPredicted RBP13.7□□□□□ -0.22
AGAP3-226ENST00000622464 MSS51Q4VC12 460 aa13.7□□□□□ -0.22
AGAP3-226ENST00000622464 ZNF410Q86VK4 478 aa13.7□□□□□ -0.22
AGAP3-226ENST00000622464 RASAL3Q86YV0 1011 aa13.7□□□□□ -0.22
AGAP3-226ENST00000622464 SRRM1Q8IYB3 904 aaKnown RBP13.7□□□□□ -0.22
AGAP3-226ENST00000622464 ARHGEF2Q92974 986 aaKnown RBP13.7□□□□□ -0.22
AGAP3-226ENST00000622464 VPS37BQ9H9H4 285 aa13.7□□□□□ -0.22
AGAP3-226ENST00000622464 MFHAS1Q9Y4C4 1052 aa13.7□□□□□ -0.22
AGAP3-226ENST00000622464 I3L4J1 428 aa13.69□□□□□ -0.22
AGAP3-226ENST00000622464 TRUB2O95900 331 aaKnown RBP13.69□□□□□ -0.22
AGAP3-226ENST00000622464 GPD1P21695 349 aa13.69□□□□□ -0.22
AGAP3-226ENST00000622464 ATICP31939 592 aa13.69□□□□□ -0.22
AGAP3-226ENST00000622464 MAGEA4P43358 317 aa13.69□□□□□ -0.22
AGAP3-226ENST00000622464 BASP1P80723 227 aaKnown RBP13.69□□□□□ -0.22
AGAP3-226ENST00000622464 POU5F1BQ06416 359 aa13.69□□□□□ -0.22
AGAP3-226ENST00000622464 IFT88Q13099 833 aa13.69□□□□□ -0.22
AGAP3-226ENST00000622464 HADHQ16836 314 aaKnown RBP13.69□□□□□ -0.22
AGAP3-226ENST00000622464 CCDC14Q49A88 953 aa13.69□□□□□ -0.22
AGAP3-226ENST00000622464 RNF187Q5TA31 235 aaPredicted RBP13.69□□□□□ -0.22
AGAP3-226ENST00000622464 ARFGAP2Q8N6H7 521 aa13.69□□□□□ -0.22
AGAP3-226ENST00000622464 SLC2A14Q8TDB8 520 aa13.69□□□□□ -0.22
AGAP3-226ENST00000622464 FAM172AQ8WUF8 416 aa13.69□□□□□ -0.22
AGAP3-226ENST00000622464 MCRS1Q96EZ8 462 aa13.69□□□□□ -0.22
AGAP3-226ENST00000622464 RUNDC3BQ96NL0 473 aa13.69□□□□□ -0.22
AGAP3-226ENST00000622464 NRCAMQ92823 1304 aa13.69□□□□□ -0.22
AGAP3-226ENST00000622464 SPAG7O75391 227 aa13.69□□□□□ -0.22
AGAP3-226ENST00000622464 CPP00450 1065 aa13.69□□□□□ -0.22
AGAP3-226ENST00000622464 TKTP29401 623 aaKnown RBP13.69□□□□□ -0.22
AGAP3-226ENST00000622464 HNRNPH1P31943 449 aaKnown RBP13.69□□□□□ -0.22
AGAP3-226ENST00000622464 PITX1P78337 314 aaPredicted RBP13.69□□□□□ -0.22
AGAP3-226ENST00000622464 INCA1Q0VD86 236 aa13.69□□□□□ -0.22
AGAP3-226ENST00000622464 PDIA2Q13087 525 aaKnown RBP13.69□□□□□ -0.22
AGAP3-226ENST00000622464 MPP2Q14168 576 aa13.69□□□□□ -0.22
AGAP3-226ENST00000622464 HIBCHQ6NVY1 386 aaPredicted RBP13.69□□□□□ -0.22
AGAP3-226ENST00000622464 CYP4V2Q6ZWL3 525 aaPredicted RBP13.69□□□□□ -0.22
AGAP3-226ENST00000622464 SPATA18Q8TC71 538 aa13.69□□□□□ -0.22
AGAP3-226ENST00000622464 C2CD4BA6NLJ0 364 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 DNALI1O14645 258 aaPredicted RBP13.68□□□□□ -0.22
AGAP3-226ENST00000622464 HMGCRP04035 888 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 CTCFP49711 727 aaPredicted RBP13.68□□□□□ -0.22
AGAP3-226ENST00000622464 EIF3EP60228 445 aaKnown RBP13.68□□□□□ -0.22
AGAP3-226ENST00000622464 ZKSCAN8Q15776 578 aaPredicted RBP13.68□□□□□ -0.22
AGAP3-226ENST00000622464 SPRED3Q2MJR0 410 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 LCLAT1Q6UWP7 414 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 TRPV1Q8NER1 839 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 CYP3A43Q9HB55 503 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 SLC45A1Q9Y2W3 748 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 IPPQ9Y573 584 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 GMNCA6NCL1 334 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 AVILO75366 819 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 RBP3P10745 1247 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 SSTR1P30872 391 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 CRHR2Q13324 411 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 ZNF268Q14587 947 aaPredicted RBP13.68□□□□□ -0.22
AGAP3-226ENST00000622464 FSCN1Q16658 493 aaKnown RBP13.68□□□□□ -0.22
AGAP3-226ENST00000622464 GNASQ5JWF2 1037 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 FNBP1LQ5T0N5 605 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 UBXN11Q5T124 520 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 NIPA2Q8N8Q9 360 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 BEST2Q8NFU1 509 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 KBTBD7Q8WVZ9 684 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 RSAD2Q8WXG1 361 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 THOC1Q96FV9 657 aaKnown RBP13.68□□□□□ -0.22
AGAP3-226ENST00000622464 XPO6Q96QU8 1125 aaKnown RBP13.68□□□□□ -0.22
AGAP3-226ENST00000622464 PAIP2Q9BPZ3 127 aaKnown RBP13.68□□□□□ -0.22
AGAP3-226ENST00000622464 PAAF1Q9BRP4 392 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 AP5M1Q9H0R1 490 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 INTS9Q9NV88 658 aaKnown RBP13.68□□□□□ -0.22
AGAP3-226ENST00000622464 ZSWIM8A7E2V4 1837 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 TRAPPC3O43617 180 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 BEST1O76090 585 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 HOXD8P13378 290 aaPredicted RBP13.68□□□□□ -0.22
AGAP3-226ENST00000622464 RPL22P35268 128 aaKnown RBP13.68□□□□□ -0.22
AGAP3-226ENST00000622464 KRT81Q14533 505 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 DCAF4L1Q3SXM0 396 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 FBXO47Q5MNV8 452 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 OSTM1Q86WC4 334 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 PYROXD2Q8N2H3 581 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 HASPINQ8TF76 798 aa13.68□□□□□ -0.22
AGAP3-226ENST00000622464 TRIM56Q9BRZ2 755 aaKnown RBP13.68□□□□□ -0.22
AGAP3-226ENST00000622464 TMEM120BA0PK00 339 aa13.67□□□□□ -0.22
AGAP3-226ENST00000622464 RRN3P2A6NIE6 340 aa13.67□□□□□ -0.22
AGAP3-226ENST00000622464 PRPSAP2O60256 369 aa13.67□□□□□ -0.22
AGAP3-226ENST00000622464 TMEM63AO94886 807 aa13.67□□□□□ -0.22
AGAP3-226ENST00000622464 KRT7P08729 469 aa13.67□□□□□ -0.22
AGAP3-226ENST00000622464 ZNF143P52747 638 aaPredicted RBP13.67□□□□□ -0.22
AGAP3-226ENST00000622464 CAP1Q01518 475 aa13.67□□□□□ -0.22
AGAP3-226ENST00000622464 C6orf118Q5T5N4 469 aa13.67□□□□□ -0.22
AGAP3-226ENST00000622464 TRMT10CQ7L0Y3 403 aaKnown RBP13.67□□□□□ -0.22
AGAP3-226ENST00000622464 CPLX4Q7Z7G2 160 aa13.67□□□□□ -0.22
AGAP3-226ENST00000622464 SLC35B2Q8TB61 432 aa13.67□□□□□ -0.22
AGAP3-226ENST00000622464 KHSRPQ92945 711 aaKnown RBP eCLIP13.67□□□□□ -0.22
AGAP3-226ENST00000622464 C12orf65Q9H3J6 166 aaKnown RBP13.67□□□□□ -0.22
AGAP3-226ENST00000622464 DDX56Q9NY93 547 aaKnown RBP13.67□□□□□ -0.22
AGAP3-226ENST00000622464 HESX1Q9UBX0 185 aa13.67□□□□□ -0.22
AGAP3-226ENST00000622464 TPX2Q9ULW0 747 aaKnown RBP13.67□□□□□ -0.22
AGAP3-226ENST00000622464 GABRQQ9UN88 632 aa13.67□□□□□ -0.22
AGAP3-226ENST00000622464 H7C0C1 242 aa13.67□□□□□ -0.22
AGAP3-226ENST00000622464 VIMP08670 466 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms