RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 PLPP4Q5VZY2 271 aa8.5□□□□□ -1.05
TARDBP-219ENST00000617757 PPP2R2DQ66LE6 453 aa8.5□□□□□ -1.05
TARDBP-219ENST00000617757 TPGS2Q68CL5 300 aa8.5□□□□□ -1.05
TARDBP-219ENST00000617757 OR6B2Q6IFH4 312 aa8.5□□□□□ -1.05
TARDBP-219ENST00000617757 PLEKHA7Q6IQ23 1121 aa8.5□□□□□ -1.05
TARDBP-219ENST00000617757 FAM183BPQ6ZVS7 135 aa8.5□□□□□ -1.05
TARDBP-219ENST00000617757 SCUBE3Q8IX30 993 aa8.5□□□□□ -1.05
TARDBP-219ENST00000617757 RHOT2Q8IXI1 618 aa8.5□□□□□ -1.05
TARDBP-219ENST00000617757 RNF10Q8N5U6 811 aaKnown RBP8.5□□□□□ -1.05
TARDBP-219ENST00000617757 MRPL43Q8N983 215 aaKnown RBP8.5□□□□□ -1.05
TARDBP-219ENST00000617757 ATAD1Q8NBU5 361 aa8.5□□□□□ -1.05
TARDBP-219ENST00000617757 SLC35G2Q8TBE7 412 aa8.5□□□□□ -1.05
TARDBP-219ENST00000617757 IPO4Q8TEX9 1081 aaKnown RBP8.5□□□□□ -1.05
TARDBP-219ENST00000617757 RFFLQ8WZ73 363 aa8.5□□□□□ -1.05
TARDBP-219ENST00000617757 MCRS1Q96EZ8 462 aa8.5□□□□□ -1.05
TARDBP-219ENST00000617757 C8orf48Q96LL4 319 aa8.5□□□□□ -1.05
TARDBP-219ENST00000617757 KLHL5Q96PQ7 755 aa8.5□□□□□ -1.05
TARDBP-219ENST00000617757 IRX2Q9BZI1 471 aaPredicted RBP8.5□□□□□ -1.05
TARDBP-219ENST00000617757 MIS12Q9H081 205 aa8.5□□□□□ -1.05
TARDBP-219ENST00000617757 CRISPLD1Q9H336 500 aa8.5□□□□□ -1.05
TARDBP-219ENST00000617757 SYNCQ9H7C4 482 aa8.5□□□□□ -1.05
TARDBP-219ENST00000617757 SLC28A3Q9HAS3 691 aa8.5□□□□□ -1.05
TARDBP-219ENST00000617757 PNPLA8Q9NP80 782 aa8.5□□□□□ -1.05
TARDBP-219ENST00000617757 NGRNQ9NPE2 291 aaKnown RBP8.5□□□□□ -1.05
TARDBP-219ENST00000617757 DMAP1Q9NPF5 467 aaPredicted RBP8.5□□□□□ -1.05
TARDBP-219ENST00000617757 WDR35Q9P2L0 1181 aa8.5□□□□□ -1.05
TARDBP-219ENST00000617757 HSFX1Q9UBD0 423 aa8.5□□□□□ -1.05
TARDBP-219ENST00000617757 AFF4Q9UHB7 1163 aaKnown RBP8.5□□□□□ -1.05
TARDBP-219ENST00000617757 COG5Q9UP83 839 aa8.5□□□□□ -1.05
TARDBP-219ENST00000617757 LAMA2P24043 3122 aaKnown RBP8.5□□□□□ -1.05
TARDBP-219ENST00000617757 C2orf71A6NGG8 1288 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 SIGLEC16A6NMB1 481 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 HIDE1A8MVS5 230 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 GOLGA8SH3BPF8 625 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 TRIM66O15016 1216 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 TGM5O43548 720 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 BUB1O43683 1085 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 ZNF500O60304 480 aaPredicted RBP8.49□□□□□ -1.05
TARDBP-219ENST00000617757 SOAT2O75908 522 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 MTA2O94776 668 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 MOCS3O95396 460 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 GJB6O95452 261 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 SEC24AO95486 1093 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 IRS1P35568 1242 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 NOP2P46087 812 aaKnown RBP8.49□□□□□ -1.05
TARDBP-219ENST00000617757 TUFMP49411 452 aaKnown RBP8.49□□□□□ -1.05
TARDBP-219ENST00000617757 GPR15P49685 360 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 TKTL1P51854 596 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 HADHBP55084 474 aaKnown RBP8.49□□□□□ -1.05
TARDBP-219ENST00000617757 SLC6A3Q01959 620 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 ADIGQ0VDE8 80 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 DDR2Q16832 855 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 MGAT5BQ3V5L5 792 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 LILRA6Q6PI73 481 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 NYAP1Q6ZVC0 841 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 GPRIN1Q7Z2K8 1008 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 ZDHHC17Q8IUH5 632 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 SCN4BQ8IWT1 228 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 TCEAL8Q8IYN2 117 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 TTC9BQ8N6N2 239 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 C3orf20Q8ND61 904 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 FEZF2Q8TBJ5 459 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 ZNF564Q8TBZ8 553 aaPredicted RBP8.49□□□□□ -1.05
TARDBP-219ENST00000617757 CLEC4CQ8WTT0 213 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 ARNTL2Q8WYA1 636 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 TIFAQ96CG3 184 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 NUP85Q9BW27 656 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 EMILIN2Q9BXX0 1053 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 ULBP1Q9BZM6 244 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 CYP4F11Q9HBI6 524 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 LRRC4Q9HBW1 653 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 MRPL47Q9HD33 250 aaKnown RBP8.49□□□□□ -1.05
TARDBP-219ENST00000617757 OSGEPQ9NPF4 335 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 PARVAQ9NVD7 372 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 CTTNBP2NLQ9P2B4 639 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 UVRAGQ9P2Y5 699 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 CHORDC1Q9UHD1 332 aaPredicted RBP8.49□□□□□ -1.05
TARDBP-219ENST00000617757 MAFFQ9ULX9 164 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 PAXBP1Q9Y5B6 917 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 PCDHGC5Q9Y5F6 944 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 USP3Q9Y6I4 520 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 SCINQ9Y6U3 715 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 CEP290O15078 2479 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 CHD9Q3L8U1 2897 aa8.49□□□□□ -1.05
TARDBP-219ENST00000617757 MACROD2A1Z1Q3 448 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 TMEM191CA6NGB0 347 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 EPOPA6NHQ4 379 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 LPXNO60711 386 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 FBXO21O94952 628 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 CSPG5O95196 566 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 C1RP00736 705 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 ADH1AP07327 375 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 KRT3P12035 628 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 KLRC2P26717 231 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 SCNN1AP37088 669 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 NAP1L1P55209 391 aaKnown RBP8.48□□□□□ -1.05
TARDBP-219ENST00000617757 DAOAP59103 153 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 RPL7AP62424 266 aaKnown RBP8.48□□□□□ -1.05
TARDBP-219ENST00000617757 RPL10AP62906 217 aaKnown RBP8.48□□□□□ -1.05
TARDBP-219ENST00000617757 MRPS5P82675 430 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms