RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 HHLA1C9JL84 531 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 PJA2O43164 708 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 MED7O43513 233 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 GJB6O95452 261 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 LSM8O95777 96 aaKnown RBP8.49□□□□□ -1.05
PCDH9-205ENST00000614931 FTLP02792 175 aaPredicted RBP8.49□□□□□ -1.05
PCDH9-205ENST00000614931 ERBB2P04626 1255 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 GZMAP12544 262 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 ABCB4P21439 1286 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 BDNFP23560 247 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 GPR15P49685 360 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 RGS7P49802 495 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 ARPP19P56211 112 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 TSPY1Q01534 308 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 ROR1Q01973 937 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 PDCLQ13371 301 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 STILQ15468 1287 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 PTPN14Q15678 1187 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 CYP4A22Q5TCH4 519 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 PMF1Q6P1K2 205 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 TRIM72Q6ZMU5 477 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 RNF19BQ6ZMZ0 732 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 MMS22LQ6ZRQ5 1243 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 CLEC20AQ6ZU45 233 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 ANKS3Q6ZW76 656 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 GPRIN1Q7Z2K8 1008 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 PHLDB2Q86SQ0 1253 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 VPS36Q86VN1 386 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 ZSCAN30Q86W11 494 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 PHF13Q86YI8 300 aaPredicted RBP8.49□□□□□ -1.05
PCDH9-205ENST00000614931 MCOLN2Q8IZK6 566 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 THEM5Q8N1Q8 247 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 ANKRD52Q8NB46 1076 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 TMEM35BQ8NCS4 154 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 STKLD1Q8NE28 680 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 PIWIL1Q96J94 861 aaKnown RBP8.49□□□□□ -1.05
PCDH9-205ENST00000614931 PGLYRP2Q96PD5 576 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 CPXM1Q96SM3 734 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 MED10Q9BTT4 135 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 APOL5Q9BWW9 433 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 THAP2Q9H0W7 228 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 LHX5Q9H2C1 402 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 ADAM7Q9H2U9 754 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 MRPL17Q9NRX2 175 aaKnown RBP8.49□□□□□ -1.05
PCDH9-205ENST00000614931 KCND1Q9NSA2 647 aa8.49□□□□□ -1.05
PCDH9-205ENST00000614931 NOTCH4Q99466 2003 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 TCRBV5S1A1TA0A578 114 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 FAM86C2PA6NEL3 165 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 PRR33A8MZF0 331 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 H7C4K7 107 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 PIK3R2O00459 728 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 AP1G2O75843 785 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 SOAT2O75908 522 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 URODP06132 367 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 CNPP09543 421 aaKnown RBP8.48□□□□□ -1.05
PCDH9-205ENST00000614931 H2AFZP0C0S5 128 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 CCDC175P0C221 793 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 CPB1P15086 417 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 EPCAMP16422 314 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 NPR3P17342 541 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 KCNA4P22459 653 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 MMP8P22894 467 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 CYP2F1P24903 491 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 OR1D2P34982 312 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 CA8P35219 290 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 RPL34P49207 117 aaKnown RBP8.48□□□□□ -1.05
PCDH9-205ENST00000614931 BCAT1P54687 386 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 MAP3K7CLP57077 242 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 ITIH3Q06033 890 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 BST2Q10589 180 aaKnown RBP8.48□□□□□ -1.05
PCDH9-205ENST00000614931 SPA17Q15506 151 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 SDHAF4Q5VUM1 108 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 SLC8B1Q6J4K2 584 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 CES5AQ6NT32 575 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 H2AFVQ71UI9 128 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 KIAA1328Q86T90 577 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 XYLT1Q86Y38 959 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 ATAD1Q8NBU5 361 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 SLC35F5Q8WV83 523 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 ZNF653Q96CK0 615 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 NECTIN4Q96NY8 510 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 KLHL5Q96PQ7 755 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 EMILIN2Q9BXX0 1053 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 DUSP16Q9BY84 665 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 IRX2Q9BZI1 471 aaPredicted RBP8.48□□□□□ -1.05
PCDH9-205ENST00000614931 TRIM7Q9C029 511 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 PDCL3Q9H2J4 239 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 RXFP1Q9HBX9 757 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 LZTFL1Q9NQ48 299 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 DZANK1Q9NVP4 752 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 ABI2Q9NYB9 513 aaPredicted RBP8.48□□□□□ -1.05
PCDH9-205ENST00000614931 MUTYHQ9UIF7 546 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 SSX2IPQ9Y2D8 614 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 BACE2Q9Y5Z0 518 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 CDY1Q9Y6F8 540 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 C5orf42Q9H799 3197 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 C2orf16Q68DN1 1984 aa8.48□□□□□ -1.05
PCDH9-205ENST00000614931 ANKRD62A6NC57 917 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 E5RJQ4 531 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 F8VP50 259 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms