RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 SLC2A4RGQ9NR83 387 aa12.74□□□□□ -0.37
ARHGEF1-216ENST00000598587 TLR8Q9NR97 1041 aaKnown RBP12.74□□□□□ -0.37
ARHGEF1-216ENST00000598587 TMEM30AQ9NV96 361 aa12.74□□□□□ -0.37
ARHGEF1-216ENST00000598587 THG1LQ9NWX6 298 aaKnown RBP12.74□□□□□ -0.37
ARHGEF1-216ENST00000598587 TSPAN16Q9UKR8 245 aa12.74□□□□□ -0.37
ARHGEF1-216ENST00000598587 CUL9Q8IWT3 2517 aa12.74□□□□□ -0.37
ARHGEF1-216ENST00000598587 TMEM221A6NGB7 291 aa12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 M0R296 226 aa12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 TNFRSF10BO14763 440 aa12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 GPR37L1O60883 481 aa12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 TADA3O75528 432 aa12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 ABL1P00519 1130 aa12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 FCARP24071 287 aa12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 USP8P40818 1118 aa12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 PSEN1P49768 467 aa12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 COPB1P53618 953 aaKnown RBP12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 USP46P62068 366 aa12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 TAF10Q12962 218 aa12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 ZNF268Q14587 947 aaPredicted RBP12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 ARHGAP44Q17R89 818 aa12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 ZSCAN23Q3MJ62 389 aa12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 TXNDC8Q6A555 127 aa12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 TANGO2Q6ICL3 276 aa12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 TMEM150AQ86TG1 271 aa12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 ARID3BQ8IVW6 561 aaPredicted RBP12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 MFSD6LQ8IWD5 586 aa12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 DNASE1L2Q92874 299 aa12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 IRF7Q92985 503 aa12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 KAT5Q92993 513 aa12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 ZSWIM3Q96MP5 696 aa12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 KREMEN1Q96MU8 473 aa12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 UBXN6Q9BZV1 441 aa12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 MFSD1Q9H3U5 465 aa12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 EPHX3Q9H6B9 360 aa12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 BRD9Q9H8M2 597 aa12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 TDP1Q9NUW8 608 aa12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 WNT16Q9UBV4 365 aa12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 LIMA1Q9UHB6 759 aaKnown RBP12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 CNTN6Q9UQ52 1028 aa12.73□□□□□ -0.37
ARHGEF1-216ENST00000598587 FAM92AA1XBS5 289 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 LGALS16A8MUM7 142 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 HEPACAM2A8MVW5 462 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 PRR33A8MZF0 331 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 GOLGA6L19H0YKK7 550 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 M0QYV0 167 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 O00370 1275 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 NRG2O14511 850 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 ZNF263O14978 683 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 XPO1O14980 1071 aaKnown RBP12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 NARSO43776 548 aaKnown RBP12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 BEST1O76090 585 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 CFHP08603 1231 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 ZNF18P17022 549 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 GNA15P30679 374 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 TUBP50607 506 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 ZNF132P52740 706 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 PLCB2Q00722 1185 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 RAPGEF1Q13905 1077 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 MEA1Q16626 185 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 FILIP1LQ4L180 1135 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 ARHGAP29Q52LW3 1261 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 LCLAT1Q6UWP7 414 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 VITQ6UXI7 678 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 TADA2BQ86TJ2 420 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 DDX42Q86XP3 938 aaKnown RBP eCLIP12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 ARHGAP18Q8N392 663 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 ZMIZ2Q8NF64 920 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 SCAMP5Q8TAC9 235 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 BPIFB1Q8TDL5 484 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 SHC3Q92529 594 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 SHDQ96IW2 340 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 PCMTD1Q96MG8 357 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 CDK5RAP1Q96SZ6 601 aaKnown RBP12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 FUCA2Q9BTY2 467 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 LSM14BQ9BX40 385 aaKnown RBP12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 SLC46A2Q9BY10 475 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 NACA2Q9H009 215 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 PLCB1Q9NQ66 1216 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 IL37Q9NZH6 218 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 DNAJC12Q9UKB3 198 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 SCML2Q9UQR0 700 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 KMT2EQ8IZD2 1858 aa12.72□□□□□ -0.37
ARHGEF1-216ENST00000598587 ZNF840PA6NDX5 716 aa12.71□□□□□ -0.37
ARHGEF1-216ENST00000598587 HHLA1C9JL84 531 aa12.71□□□□□ -0.37
ARHGEF1-216ENST00000598587 CHADO15335 359 aa12.71□□□□□ -0.37
ARHGEF1-216ENST00000598587 THAP12O43422 761 aa12.71□□□□□ -0.37
ARHGEF1-216ENST00000598587 PRAMEF12O95522 483 aa12.71□□□□□ -0.37
ARHGEF1-216ENST00000598587 HDCP19113 662 aa12.71□□□□□ -0.37
ARHGEF1-216ENST00000598587 BRD2P25440 801 aaKnown RBP12.71□□□□□ -0.37
ARHGEF1-216ENST00000598587 VIPR2P41587 438 aa12.71□□□□□ -0.37
ARHGEF1-216ENST00000598587 PLA2G4AP47712 749 aa12.71□□□□□ -0.37
ARHGEF1-216ENST00000598587 BPIFB4P59827 614 aa12.71□□□□□ -0.37
ARHGEF1-216ENST00000598587 UBXN1Q04323 297 aa12.71□□□□□ -0.37
ARHGEF1-216ENST00000598587 PTK2Q05397 1052 aa12.71□□□□□ -0.37
ARHGEF1-216ENST00000598587 FCHO2Q0JRZ9 810 aa12.71□□□□□ -0.37
ARHGEF1-216ENST00000598587 GRM2Q14416 872 aa12.71□□□□□ -0.37
ARHGEF1-216ENST00000598587 NCAPHQ15003 741 aa12.71□□□□□ -0.37
ARHGEF1-216ENST00000598587 CNGA2Q16280 664 aa12.71□□□□□ -0.37
ARHGEF1-216ENST00000598587 HECTD3Q5T447 861 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms