RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 MTMR12Q9C0I1 747 aa17.59■□□□□ 0.41
SHKBP1-215ENST00000597649 PCIF1Q9H4Z3 704 aa17.59■□□□□ 0.41
SHKBP1-215ENST00000597649 MRPL44Q9H9J2 332 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-215ENST00000597649 MBD1Q9UIS9 605 aaPredicted RBP17.59■□□□□ 0.41
SHKBP1-215ENST00000597649 RCOR1Q9UKL0 485 aa17.59■□□□□ 0.41
SHKBP1-215ENST00000597649 SRPRBQ9Y5M8 271 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-215ENST00000597649 PTPRJQ12913 1337 aa17.58■□□□□ 0.4
SHKBP1-215ENST00000597649 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.58■□□□□ 0.4
SHKBP1-215ENST00000597649 SGK1O00141 431 aa17.58■□□□□ 0.4
SHKBP1-215ENST00000597649 BDNFP23560 247 aa17.58■□□□□ 0.4
SHKBP1-215ENST00000597649 PCSK1P29120 753 aa17.58■□□□□ 0.4
SHKBP1-215ENST00000597649 P2RY2P41231 377 aa17.58■□□□□ 0.4
SHKBP1-215ENST00000597649 PTGER3P43115 390 aa17.58■□□□□ 0.4
SHKBP1-215ENST00000597649 RHBDF2Q6PJF5 856 aa17.58■□□□□ 0.4
SHKBP1-215ENST00000597649 FILIP1Q7Z7B0 1213 aa17.58■□□□□ 0.4
SHKBP1-215ENST00000597649 TMEFF1Q8IYR6 380 aa17.58■□□□□ 0.4
SHKBP1-215ENST00000597649 ALLCQ8N6M5 410 aa17.58■□□□□ 0.4
SHKBP1-215ENST00000597649 IL17RCQ8NAC3 791 aa17.58■□□□□ 0.4
SHKBP1-215ENST00000597649 CCDC26Q8TAB7 109 aa17.58■□□□□ 0.4
SHKBP1-215ENST00000597649 SPATA18Q8TC71 538 aa17.58■□□□□ 0.4
SHKBP1-215ENST00000597649 MYLPFQ96A32 169 aa17.58■□□□□ 0.4
SHKBP1-215ENST00000597649 ZDHHC4Q9NPG8 344 aa17.58■□□□□ 0.4
SHKBP1-215ENST00000597649 MAGEC2Q9UBF1 373 aaPredicted RBP17.58■□□□□ 0.4
SHKBP1-215ENST00000597649 FBXO2Q9UK22 296 aaPredicted RBP17.58■□□□□ 0.4
SHKBP1-215ENST00000597649 MORC2Q9Y6X9 1032 aaPredicted RBP17.58■□□□□ 0.4
SHKBP1-215ENST00000597649 PTPRDP23468 1912 aa17.57■□□□□ 0.4
SHKBP1-215ENST00000597649 ZNF840PA6NDX5 716 aa17.57■□□□□ 0.4
SHKBP1-215ENST00000597649 SRRM3A6NNA2 597 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-215ENST00000597649 PDGFRBP09619 1106 aa17.57■□□□□ 0.4
SHKBP1-215ENST00000597649 GARTP22102 1010 aa17.57■□□□□ 0.4
SHKBP1-215ENST00000597649 SLC7A9P82251 487 aa17.57■□□□□ 0.4
SHKBP1-215ENST00000597649 MRPS21P82921 87 aaKnown RBP17.57■□□□□ 0.4
SHKBP1-215ENST00000597649 DHCR24Q15392 516 aa17.57■□□□□ 0.4
SHKBP1-215ENST00000597649 TRIM61Q5EBN2 209 aa17.57■□□□□ 0.4
SHKBP1-215ENST00000597649 KIAA1211LQ6NV74 962 aa17.57■□□□□ 0.4
SHKBP1-215ENST00000597649 C12orf40Q86WS4 652 aa17.57■□□□□ 0.4
SHKBP1-215ENST00000597649 TXNDC5Q8NBS9 432 aaKnown RBP17.57■□□□□ 0.4
SHKBP1-215ENST00000597649 OR5B17Q8NGF7 314 aa17.57■□□□□ 0.4
SHKBP1-215ENST00000597649 SYT15Q9BQS2 421 aa17.57■□□□□ 0.4
SHKBP1-215ENST00000597649 TTLL2Q9BWV7 592 aa17.57■□□□□ 0.4
SHKBP1-215ENST00000597649 TRPM5Q9NZQ8 1165 aa17.57■□□□□ 0.4
SHKBP1-215ENST00000597649 SEL1LQ9UBV2 794 aa17.57■□□□□ 0.4
SHKBP1-215ENST00000597649 EVLQ9UI08 416 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-215ENST00000597649 EXOC7Q9UPT5 735 aa17.57■□□□□ 0.4
SHKBP1-215ENST00000597649 NME7Q9Y5B8 376 aa17.57■□□□□ 0.4
SHKBP1-215ENST00000597649 A0A0A0MRY4 1105 aa17.56■□□□□ 0.4
SHKBP1-215ENST00000597649 CUTAO60888 179 aa17.56■□□□□ 0.4
SHKBP1-215ENST00000597649 ADAM23O75077 832 aa17.56■□□□□ 0.4
SHKBP1-215ENST00000597649 GCNT3O95395 438 aa17.56■□□□□ 0.4
SHKBP1-215ENST00000597649 KLF8O95600 359 aaPredicted RBP17.56■□□□□ 0.4
SHKBP1-215ENST00000597649 LDHAP00338 332 aaKnown RBP17.56■□□□□ 0.4
SHKBP1-215ENST00000597649 TIE1P35590 1138 aa17.56■□□□□ 0.4
SHKBP1-215ENST00000597649 GRIK1P39086 918 aa17.56■□□□□ 0.4
SHKBP1-215ENST00000597649 TXLNAP40222 546 aa17.56■□□□□ 0.4
SHKBP1-215ENST00000597649 KIR2DL1P43626 348 aaPredicted RBP17.56■□□□□ 0.4
SHKBP1-215ENST00000597649 MAP7D1Q3KQU3 841 aa17.56■□□□□ 0.4
SHKBP1-215ENST00000597649 VSTM1Q6UX27 236 aa17.56■□□□□ 0.4
SHKBP1-215ENST00000597649 C4orf50Q6ZRC1 276 aa17.56■□□□□ 0.4
SHKBP1-215ENST00000597649 DENND5BQ6ZUT9 1274 aa17.56■□□□□ 0.4
SHKBP1-215ENST00000597649 ARMCX6Q7L4S7 300 aa17.56■□□□□ 0.4
SHKBP1-215ENST00000597649 DPH6Q7L8W6 267 aa17.56■□□□□ 0.4
SHKBP1-215ENST00000597649 CLIC6Q96NY7 704 aa17.56■□□□□ 0.4
SHKBP1-215ENST00000597649 TMEM30AQ9NV96 361 aa17.56■□□□□ 0.4
SHKBP1-215ENST00000597649 INTS13Q9NVM9 706 aa17.56■□□□□ 0.4
SHKBP1-215ENST00000597649 SMPD4Q9NXE4 827 aa17.56■□□□□ 0.4
SHKBP1-215ENST00000597649 CDH9Q9ULB4 789 aa17.56■□□□□ 0.4
SHKBP1-215ENST00000597649 CPQQ9Y646 472 aa17.56■□□□□ 0.4
SHKBP1-215ENST00000597649 PI4KAP42356 2102 aa17.56■□□□□ 0.4
SHKBP1-215ENST00000597649 TNFRSF10BO14763 440 aa17.55■□□□□ 0.4
SHKBP1-215ENST00000597649 HYAL3O43820 417 aaPredicted RBP17.55■□□□□ 0.4
SHKBP1-215ENST00000597649 KAT7O95251 611 aa17.55■□□□□ 0.4
SHKBP1-215ENST00000597649 OLFM2O95897 454 aa17.55■□□□□ 0.4
SHKBP1-215ENST00000597649 PFKLP17858 780 aa17.55■□□□□ 0.4
SHKBP1-215ENST00000597649 MAPK8P45983 427 aa17.55■□□□□ 0.4
SHKBP1-215ENST00000597649 CACNA2D1P54289 1103 aa17.55■□□□□ 0.4
SHKBP1-215ENST00000597649 LPCAT2Q7L5N7 544 aa17.55■□□□□ 0.4
SHKBP1-215ENST00000597649 PIP4P1Q86T03 277 aa17.55■□□□□ 0.4
SHKBP1-215ENST00000597649 NOC3LQ8WTT2 800 aaKnown RBP17.55■□□□□ 0.4
SHKBP1-215ENST00000597649 PCED1BQ96HM7 432 aa17.55■□□□□ 0.4
SHKBP1-215ENST00000597649 HPDLQ96IR7 371 aa17.55■□□□□ 0.4
SHKBP1-215ENST00000597649 PNKPQ96T60 521 aa17.55■□□□□ 0.4
SHKBP1-215ENST00000597649 GDPD2Q9HCC8 539 aa17.55■□□□□ 0.4
SHKBP1-215ENST00000597649 FSCN3Q9NQT6 498 aa17.55■□□□□ 0.4
SHKBP1-215ENST00000597649 PCDHA7Q9UN72 937 aa17.55■□□□□ 0.4
SHKBP1-215ENST00000597649 PCDHB13Q9Y5F0 798 aa17.55■□□□□ 0.4
SHKBP1-215ENST00000597649 MYOFQ9NZM1 2061 aa17.55■□□□□ 0.4
SHKBP1-215ENST00000597649 CELSR3Q9NYQ7 3312 aa17.55■□□□□ 0.4
SHKBP1-215ENST00000597649 MYO18AQ92614 2054 aaKnown RBP17.54■□□□□ 0.4
SHKBP1-215ENST00000597649 SPAARA0A1B0GVQ0 90 aa17.54■□□□□ 0.4
SHKBP1-215ENST00000597649 GOLGA6L4A6NEF3 574 aa17.54■□□□□ 0.4
SHKBP1-215ENST00000597649 MAP3K13O43283 966 aa17.54■□□□□ 0.4
SHKBP1-215ENST00000597649 ALDH1A2O94788 518 aa17.54■□□□□ 0.4
SHKBP1-215ENST00000597649 PRPF6O94906 941 aaKnown RBP17.54■□□□□ 0.4
SHKBP1-215ENST00000597649 OAS1P00973 400 aaKnown RBP17.54■□□□□ 0.4
SHKBP1-215ENST00000597649 TMEM191BP0C7N4 346 aa17.54■□□□□ 0.4
SHKBP1-215ENST00000597649 GAP43P17677 238 aa17.54■□□□□ 0.4
SHKBP1-215ENST00000597649 ENGP17813 658 aa17.54■□□□□ 0.4
SHKBP1-215ENST00000597649 WARSP23381 471 aaKnown RBP17.54■□□□□ 0.4
SHKBP1-215ENST00000597649 PDE6CP51160 858 aa17.54■□□□□ 0.4
SHKBP1-215ENST00000597649 CYP27A1Q02318 531 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms