RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 WNT8AQ9H1J5 351 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 DPH5Q9H2P9 285 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 SIX4Q9UIU6 781 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 HAS3O00219 553 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 CA12O43570 354 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 CYP2C9P11712 490 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 CD58P19256 250 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 ZNF132P52740 706 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 USP46P62068 366 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 SLC10A6Q3KNW5 377 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 SH2D4BQ5SQS7 431 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 SCARA5Q6ZMJ2 495 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 C1orf127Q8N9H9 656 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 ANKLE1Q8NAG6 615 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 SMC1BQ8NDV3 1235 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 TRPV1Q8NER1 839 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 CPA5Q8WXQ8 436 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 INPP5DQ92835 1189 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 SLC35B4Q969S0 331 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 AP5M1Q9H0R1 490 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 ERVK-5Q9HDB9 667 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 UTP11Q9Y3A2 253 aaKnown RBP16.12■□□□□ 0.17
PNKP-204ENST00000594661 CYP1A1P04798 512 aaPredicted RBP16.11■□□□□ 0.17
PNKP-204ENST00000594661 ASPAP45381 313 aa16.11■□□□□ 0.17
PNKP-204ENST00000594661 ADAM17P78536 824 aa16.11■□□□□ 0.17
PNKP-204ENST00000594661 ZNF200P98182 395 aaPredicted RBP16.11■□□□□ 0.17
PNKP-204ENST00000594661 RCN2Q14257 317 aa16.11■□□□□ 0.17
PNKP-204ENST00000594661 PPP2R5EQ16537 467 aa16.11■□□□□ 0.17
PNKP-204ENST00000594661 CPNE8Q86YQ8 564 aa16.11■□□□□ 0.17
PNKP-204ENST00000594661 PASD1Q8IV76 773 aa16.11■□□□□ 0.17
PNKP-204ENST00000594661 SMYD1Q8NB12 490 aa16.11■□□□□ 0.17
PNKP-204ENST00000594661 OSMRQ99650 979 aa16.11■□□□□ 0.17
PNKP-204ENST00000594661 TMEM109Q9BVC6 243 aa16.11■□□□□ 0.17
PNKP-204ENST00000594661 DCLRE1BQ9H816 532 aa16.11■□□□□ 0.17
PNKP-204ENST00000594661 FGFR1OP2Q9NVK5 253 aa16.11■□□□□ 0.17
PNKP-204ENST00000594661 STOML1Q9UBI4 398 aa16.11■□□□□ 0.17
PNKP-204ENST00000594661 SMIM35A0A1B0GVV1 85 aa16.1■□□□□ 0.17
PNKP-204ENST00000594661 RGS16O15492 202 aaPredicted RBP16.1■□□□□ 0.17
PNKP-204ENST00000594661 KRT19P08727 400 aa16.1■□□□□ 0.17
PNKP-204ENST00000594661 ZNF24P17028 368 aa16.1■□□□□ 0.17
PNKP-204ENST00000594661 IFNAR2P48551 515 aa16.1■□□□□ 0.17
PNKP-204ENST00000594661 POU5F1Q01860 360 aaKnown RBP16.1■□□□□ 0.17
PNKP-204ENST00000594661 ZRSR2Q15696 482 aaKnown RBP16.1■□□□□ 0.17
PNKP-204ENST00000594661 C6orf118Q5T5N4 469 aa16.1■□□□□ 0.17
PNKP-204ENST00000594661 SEL1L2Q5TEA6 688 aa16.1■□□□□ 0.17
PNKP-204ENST00000594661 CCNJLQ8IV13 435 aa16.1■□□□□ 0.17
PNKP-204ENST00000594661 RNF168Q8IYW5 571 aaPredicted RBP16.1■□□□□ 0.17
PNKP-204ENST00000594661 CD101Q93033 1021 aa16.1■□□□□ 0.17
PNKP-204ENST00000594661 DDX23Q9BUQ8 820 aaKnown RBP16.1■□□□□ 0.17
PNKP-204ENST00000594661 CISHQ9NSE2 258 aa16.1■□□□□ 0.17
PNKP-204ENST00000594661 POLIQ9UNA4 740 aa16.1■□□□□ 0.17
PNKP-204ENST00000594661 Q9Y3F1 56 aa16.1■□□□□ 0.17
PNKP-204ENST00000594661 DNAH12Q6ZR08 3092 aa16.1■□□□□ 0.17
PNKP-204ENST00000594661 MYADML2A6NDP7 307 aa16.1■□□□□ 0.17
PNKP-204ENST00000594661 DCAF8L1A6NGE4 600 aa16.1■□□□□ 0.17
PNKP-204ENST00000594661 TREHO43280 583 aa16.1■□□□□ 0.17
PNKP-204ENST00000594661 THAP12O43422 761 aa16.1■□□□□ 0.17
PNKP-204ENST00000594661 WEE2P0C1S8 567 aa16.1■□□□□ 0.17
PNKP-204ENST00000594661 HOXA11P31270 313 aaPredicted RBP16.1■□□□□ 0.17
PNKP-204ENST00000594661 IFI35P80217 286 aaPredicted RBP16.1■□□□□ 0.17
PNKP-204ENST00000594661 CENPCQ03188 943 aa16.1■□□□□ 0.17
PNKP-204ENST00000594661 TMED1Q13445 227 aa16.1■□□□□ 0.17
PNKP-204ENST00000594661 FSCN1Q16658 493 aaKnown RBP16.1■□□□□ 0.17
PNKP-204ENST00000594661 GSTA3Q16772 222 aa16.1■□□□□ 0.17
PNKP-204ENST00000594661 C2CD6Q53TS8 623 aa16.1■□□□□ 0.17
PNKP-204ENST00000594661 CYP4F22Q6NT55 531 aa16.1■□□□□ 0.17
PNKP-204ENST00000594661 MCOLN2Q8IZK6 566 aa16.1■□□□□ 0.17
PNKP-204ENST00000594661 CXorf38Q8TB03 319 aa16.1■□□□□ 0.17
PNKP-204ENST00000594661 DNAJB3Q8WWF6 145 aa16.1■□□□□ 0.17
PNKP-204ENST00000594661 RMDN2Q96LZ7 410 aa16.1■□□□□ 0.17
PNKP-204ENST00000594661 FMO2Q99518 471 aa16.1■□□□□ 0.17
PNKP-204ENST00000594661 TRIM51Q9BSJ1 452 aa16.1■□□□□ 0.17
PNKP-204ENST00000594661 GCOM2Q9BZD3 368 aaPredicted RBP16.1■□□□□ 0.17
PNKP-204ENST00000594661 STMN4Q9H169 189 aaPredicted RBP16.1■□□□□ 0.17
PNKP-204ENST00000594661 PABPC3Q9H361 631 aaKnown RBP16.1■□□□□ 0.17
PNKP-204ENST00000594661 GABRQQ9UN88 632 aa16.1■□□□□ 0.17
PNKP-204ENST00000594661 TRIP12Q14669 1992 aaPredicted RBP16.09■□□□□ 0.17
PNKP-204ENST00000594661 TCP11X1B4DZS4 312 aa16.09■□□□□ 0.17
PNKP-204ENST00000594661 ITGB3P05106 788 aa16.09■□□□□ 0.17
PNKP-204ENST00000594661 AKR1A1P14550 325 aa16.09■□□□□ 0.17
PNKP-204ENST00000594661 DR1Q01658 176 aa16.09■□□□□ 0.17
PNKP-204ENST00000594661 KPNB1Q14974 876 aaKnown RBP16.09■□□□□ 0.17
PNKP-204ENST00000594661 ZNF394Q53GI3 561 aa16.09■□□□□ 0.17
PNKP-204ENST00000594661 LLGL2Q6P1M3 1020 aa16.09■□□□□ 0.17
PNKP-204ENST00000594661 EXOC3L1Q86VI1 746 aa16.09■□□□□ 0.17
PNKP-204ENST00000594661 ZBTB8BQ8NAP8 495 aaPredicted RBP16.09■□□□□ 0.17
PNKP-204ENST00000594661 ADPGKQ9BRR6 497 aa16.09■□□□□ 0.17
PNKP-204ENST00000594661 NXF1Q9UBU9 619 aaKnown RBP16.09■□□□□ 0.17
PNKP-204ENST00000594661 SUN2Q9UH99 717 aa16.09■□□□□ 0.17
PNKP-204ENST00000594661 ANAPC7Q9UJX3 599 aa16.09■□□□□ 0.17
PNKP-204ENST00000594661 ATP8A1Q9Y2Q0 1164 aa16.09■□□□□ 0.17
PNKP-204ENST00000594661 PYGMP11217 842 aa16.09■□□□□ 0.17
PNKP-204ENST00000594661 NSFP46459 744 aaKnown RBP16.09■□□□□ 0.17
PNKP-204ENST00000594661 RAP1GAPP47736 663 aa16.09■□□□□ 0.17
PNKP-204ENST00000594661 NOMO3P69849 1222 aa16.09■□□□□ 0.17
PNKP-204ENST00000594661 PURAQ00577 322 aaKnown RBP16.09■□□□□ 0.17
PNKP-204ENST00000594661 SULT2A1Q06520 285 aa16.09■□□□□ 0.17
PNKP-204ENST00000594661 CEP128Q6ZU80 1094 aa16.09■□□□□ 0.17
PNKP-204ENST00000594661 CATSPER4Q7RTX7 472 aa16.09■□□□□ 0.17
PNKP-204ENST00000594661 PHLDB2Q86SQ0 1253 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms