RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	PRMT8	Q9NR22	394 aa	Predicted RBP	14.15	□□□□□ -0.14
SREBF1-223	ENST00000584760	RAB23	Q9ULC3	237 aa		14.15	□□□□□ -0.14
SREBF1-223	ENST00000584760	BIN1	O00499	593 aa		14.14	□□□□□ -0.15
SREBF1-223	ENST00000584760	ZNF263	O14978	683 aa		14.14	□□□□□ -0.15
SREBF1-223	ENST00000584760	CHAD	O15335	359 aa		14.14	□□□□□ -0.15
SREBF1-223	ENST00000584760	STX10	O60499	249 aa		14.14	□□□□□ -0.15
SREBF1-223	ENST00000584760	ORC1	Q13415	861 aa		14.14	□□□□□ -0.15
SREBF1-223	ENST00000584760	ST3GAL2	Q16842	350 aa		14.14	□□□□□ -0.15
SREBF1-223	ENST00000584760	CBWD6	Q4V339	395 aa		14.14	□□□□□ -0.15
SREBF1-223	ENST00000584760	CBWD3	Q5JTY5	395 aa		14.14	□□□□□ -0.15
SREBF1-223	ENST00000584760	CBWD5	Q5RIA9	395 aa		14.14	□□□□□ -0.15
SREBF1-223	ENST00000584760	CRYBG2	Q8N1P7	616 aa		14.14	□□□□□ -0.15
SREBF1-223	ENST00000584760	FBXL13	Q8NEE6	735 aa		14.14	□□□□□ -0.15
SREBF1-223	ENST00000584760	RIN3	Q8TB24	985 aa		14.14	□□□□□ -0.15
SREBF1-223	ENST00000584760	BPIFB1	Q8TDL5	484 aa		14.14	□□□□□ -0.15
SREBF1-223	ENST00000584760	USP13	Q92995	863 aa	Predicted RBP	14.14	□□□□□ -0.15
SREBF1-223	ENST00000584760	SLC35C1	Q96A29	364 aa		14.14	□□□□□ -0.15
SREBF1-223	ENST00000584760	SMARCD1	Q96GM5	515 aa		14.14	□□□□□ -0.15
SREBF1-223	ENST00000584760	TWNK	Q96RR1	684 aa		14.14	□□□□□ -0.15
SREBF1-223	ENST00000584760	SLC22A12	Q96S37	553 aa		14.14	□□□□□ -0.15
SREBF1-223	ENST00000584760	DUSP9	Q99956	384 aa	Known RBP	14.14	□□□□□ -0.15
SREBF1-223	ENST00000584760	FAM126A	Q9BYI3	521 aa	Predicted RBP	14.14	□□□□□ -0.15
SREBF1-223	ENST00000584760	KIF9	Q9HAQ2	790 aa		14.14	□□□□□ -0.15
SREBF1-223	ENST00000584760	CYP3A43	Q9HB55	503 aa		14.14	□□□□□ -0.15
SREBF1-223	ENST00000584760	ARMCX3	Q9UH62	379 aa	Predicted RBP	14.14	□□□□□ -0.15
SREBF1-223	ENST00000584760	CCL26	Q9Y258	94 aa		14.14	□□□□□ -0.15
SREBF1-223	ENST00000584760	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	14.14	□□□□□ -0.15
SREBF1-223	ENST00000584760	ATP8B3	O60423	1300 aa		14.14	□□□□□ -0.15
SREBF1-223	ENST00000584760	DPYSL4	O14531	572 aa		14.13	□□□□□ -0.15
SREBF1-223	ENST00000584760	ADRB1	P08588	477 aa		14.13	□□□□□ -0.15
SREBF1-223	ENST00000584760	CCDC130	P13994	396 aa		14.13	□□□□□ -0.15
SREBF1-223	ENST00000584760	AVPR1A	P37288	418 aa		14.13	□□□□□ -0.15
SREBF1-223	ENST00000584760	NRL	P54845	237 aa		14.13	□□□□□ -0.15
SREBF1-223	ENST00000584760	ZNF268	Q14587	947 aa	Predicted RBP	14.13	□□□□□ -0.15
SREBF1-223	ENST00000584760	ARHGAP29	Q52LW3	1261 aa		14.13	□□□□□ -0.15
SREBF1-223	ENST00000584760	TCERG1L	Q5VWI1	586 aa		14.13	□□□□□ -0.15
SREBF1-223	ENST00000584760	KLHL10	Q6JEL2	608 aa		14.13	□□□□□ -0.15
SREBF1-223	ENST00000584760	YAF2	Q8IY57	180 aa		14.13	□□□□□ -0.15
SREBF1-223	ENST00000584760	ZNF687	Q8N1G0	1237 aa		14.13	□□□□□ -0.15
SREBF1-223	ENST00000584760	CELF5	Q8N6W0	485 aa	Known RBP	14.13	□□□□□ -0.15
SREBF1-223	ENST00000584760	CCDC150	Q8NCX0	1101 aa		14.13	□□□□□ -0.15
SREBF1-223	ENST00000584760	WHAMM	Q8TF30	809 aa		14.13	□□□□□ -0.15
SREBF1-223	ENST00000584760	NELFB	Q8WX92	580 aa		14.13	□□□□□ -0.15
SREBF1-223	ENST00000584760	FAXDC2	Q96IV6	333 aa		14.13	□□□□□ -0.15
SREBF1-223	ENST00000584760	ZFYVE19	Q96K21	471 aa		14.13	□□□□□ -0.15
SREBF1-223	ENST00000584760	CEP63	Q96MT8	703 aa		14.13	□□□□□ -0.15
SREBF1-223	ENST00000584760	DMAP1	Q9NPF5	467 aa	Predicted RBP	14.13	□□□□□ -0.15
SREBF1-223	ENST00000584760	KRT82	Q9NSB4	513 aa		14.13	□□□□□ -0.15
SREBF1-223	ENST00000584760	RAB20	Q9NX57	234 aa		14.13	□□□□□ -0.15
SREBF1-223	ENST00000584760	EHD2	Q9NZN4	543 aa		14.13	□□□□□ -0.15
SREBF1-223	ENST00000584760	GCNT4	Q9P109	453 aa		14.13	□□□□□ -0.15
SREBF1-223	ENST00000584760	CTNND2	Q9UQB3	1225 aa		14.13	□□□□□ -0.15
SREBF1-223	ENST00000584760	COQ4	Q9Y3A0	265 aa		14.13	□□□□□ -0.15
SREBF1-223	ENST00000584760	PIAS3	Q9Y6X2	628 aa		14.13	□□□□□ -0.15
SREBF1-223	ENST00000584760	TRAV19	A0A0A6YYK7	116 aa		14.12	□□□□□ -0.15
SREBF1-223	ENST00000584760	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	14.12	□□□□□ -0.15
SREBF1-223	ENST00000584760	C2orf78	A6NCI8	922 aa		14.12	□□□□□ -0.15
SREBF1-223	ENST00000584760	MAN2B1	O00754	1011 aa		14.12	□□□□□ -0.15
SREBF1-223	ENST00000584760	CILP	O75339	1184 aa		14.12	□□□□□ -0.15
SREBF1-223	ENST00000584760	MLLT6	P55198	1093 aa	Predicted RBP	14.12	□□□□□ -0.15
SREBF1-223	ENST00000584760	PLCB2	Q00722	1185 aa		14.12	□□□□□ -0.15
SREBF1-223	ENST00000584760	PAK1	Q13153	545 aa		14.12	□□□□□ -0.15
SREBF1-223	ENST00000584760	PPM1J	Q5JR12	505 aa		14.12	□□□□□ -0.15
SREBF1-223	ENST00000584760	LAIR1	Q6GTX8	287 aa		14.12	□□□□□ -0.15
SREBF1-223	ENST00000584760	PRR23B	Q6ZRT6	265 aa		14.12	□□□□□ -0.15
SREBF1-223	ENST00000584760	CLEC17A	Q6ZS10	378 aa		14.12	□□□□□ -0.15
SREBF1-223	ENST00000584760	C12orf29	Q8N999	325 aa		14.12	□□□□□ -0.15
SREBF1-223	ENST00000584760	TRIML1	Q8N9V2	468 aa		14.12	□□□□□ -0.15
SREBF1-223	ENST00000584760	ZMIZ2	Q8NF64	920 aa		14.12	□□□□□ -0.15
SREBF1-223	ENST00000584760	SLC2A14	Q8TDB8	520 aa		14.12	□□□□□ -0.15
SREBF1-223	ENST00000584760	KCNK16	Q96T55	309 aa		14.12	□□□□□ -0.15
SREBF1-223	ENST00000584760	ARID3A	Q99856	593 aa		14.12	□□□□□ -0.15
SREBF1-223	ENST00000584760	MED10	Q9BTT4	135 aa		14.12	□□□□□ -0.15
SREBF1-223	ENST00000584760	LMAN1L	Q9HAT1	526 aa		14.12	□□□□□ -0.15
SREBF1-223	ENST00000584760	METTL14	Q9HCE5	456 aa	Known RBP	14.12	□□□□□ -0.15
SREBF1-223	ENST00000584760	TRPC7	Q9HCX4	862 aa		14.12	□□□□□ -0.15
SREBF1-223	ENST00000584760	FAM49B	Q9NUQ9	324 aa		14.12	□□□□□ -0.15
SREBF1-223	ENST00000584760	TDP1	Q9NUW8	608 aa		14.12	□□□□□ -0.15
SREBF1-223	ENST00000584760	KIAA1468	Q9P260	1216 aa		14.12	□□□□□ -0.15
SREBF1-223	ENST00000584760	KIAA1549L	Q6ZVL6	1849 aa		14.12	□□□□□ -0.15
SREBF1-223	ENST00000584760	KMT2B	Q9UMN6	2715 aa	Predicted RBP	14.12	□□□□□ -0.15
SREBF1-223	ENST00000584760	SPTBN2	O15020	2390 aa		14.11	□□□□□ -0.15
SREBF1-223	ENST00000584760	TPR	P12270	2363 aa	Known RBP	14.11	□□□□□ -0.15
SREBF1-223	ENST00000584760	BICDL2	A1A5D9	508 aa		14.11	□□□□□ -0.15
SREBF1-223	ENST00000584760	ZNF840P	A6NDX5	716 aa		14.11	□□□□□ -0.15
SREBF1-223	ENST00000584760	TNFRSF10B	O14763	440 aa		14.11	□□□□□ -0.15
SREBF1-223	ENST00000584760	AP1G2	O75843	785 aa		14.11	□□□□□ -0.15
SREBF1-223	ENST00000584760	BEST1	O76090	585 aa		14.11	□□□□□ -0.15
SREBF1-223	ENST00000584760	OLFM2	O95897	454 aa		14.11	□□□□□ -0.15
SREBF1-223	ENST00000584760	CKM	P06732	381 aa		14.11	□□□□□ -0.15
SREBF1-223	ENST00000584760	TDGF1	P13385	188 aa		14.11	□□□□□ -0.15
SREBF1-223	ENST00000584760	CD58	P19256	250 aa		14.11	□□□□□ -0.15
SREBF1-223	ENST00000584760	TAF10	Q12962	218 aa		14.11	□□□□□ -0.15
SREBF1-223	ENST00000584760	USP4	Q13107	963 aa		14.11	□□□□□ -0.15
SREBF1-223	ENST00000584760	PPP2R5D	Q14738	602 aa		14.11	□□□□□ -0.15
SREBF1-223	ENST00000584760	ZNF77	Q15935	545 aa		14.11	□□□□□ -0.15
SREBF1-223	ENST00000584760	CAMK4	Q16566	473 aa		14.11	□□□□□ -0.15
SREBF1-223	ENST00000584760	FILIP1	Q7Z7B0	1213 aa		14.11	□□□□□ -0.15
SREBF1-223	ENST00000584760	NUP93	Q8N1F7	819 aa		14.11	□□□□□ -0.15
SREBF1-223	ENST00000584760	CSGALNACT1	Q8TDX6	532 aa		14.11	□□□□□ -0.15

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