RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 NR2F1P10589 423 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 VAV1P15498 845 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 RAG1P15918 1043 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 IFNAR1P17181 557 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 FGFR4P22455 802 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 ACAT1P24752 427 aaKnown RBP6.9□□□□□ -1.3
COPS3-216ENST00000579716 MSNP26038 577 aaKnown RBP6.9□□□□□ -1.3
COPS3-216ENST00000579716 ETV3P41162 512 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 PIK3CBP42338 1070 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 SLC8A3P57103 927 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 GMFBP60983 142 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 HTRA3P83110 453 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 TEKQ02763 1124 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 LRMPQ12912 555 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 GIT2Q14161 759 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 SQLEQ14534 574 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 MORF4L2Q15014 288 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 MAPRE2Q15555 327 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 TRADDQ15628 312 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 SNCBQ16143 134 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 MAP3K11Q16584 847 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 AAK1Q2M2I8 961 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 LRIT3Q3SXY7 679 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 XKR3Q5GH77 459 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 CENPPQ6IPU0 288 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 C6orf89Q6UWU4 347 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 PTCHD4Q6ZW05 846 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 UBE2R2Q712K3 238 aaPredicted RBP6.9□□□□□ -1.3
COPS3-216ENST00000579716 RHOUQ7L0Q8 258 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 PIWIL3Q7Z3Z3 882 aaKnown RBP6.9□□□□□ -1.3
COPS3-216ENST00000579716 FAM160B2Q86V87 743 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 DENND6AQ8IWF6 608 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 SCUBE1Q8IWY4 988 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 KIAA0319LQ8IZA0 1049 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 LSMEM2Q8N112 164 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 LILRA2Q8N149 483 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 KCTD6Q8NC69 237 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 SIMC1Q8NDZ2 872 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 TRPC4APQ8TEL6 797 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 EFHD2Q96C19 240 aaPredicted RBP6.9□□□□□ -1.3
COPS3-216ENST00000579716 FEM1CQ96JP0 617 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 TCEANC2Q96MN5 208 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 SIKE1Q9BRV8 207 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 MXD3Q9BW11 206 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 LSG1Q9H089 658 aaKnown RBP6.9□□□□□ -1.3
COPS3-216ENST00000579716 XYLT2Q9H1B5 865 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 MAGEH1Q9H213 219 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 TMEM60Q9H2L4 133 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 MMADHCQ9H3L0 296 aaPredicted RBP6.9□□□□□ -1.3
COPS3-216ENST00000579716 TTC12Q9H892 705 aaPredicted RBP6.9□□□□□ -1.3
COPS3-216ENST00000579716 SERINC1Q9NRX5 453 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 CACNG4Q9UBN1 327 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 SCAF8Q9UPN6 1271 aaKnown RBP6.9□□□□□ -1.3
COPS3-216ENST00000579716 AURKCQ9UQB9 309 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 CLCA2Q9UQC9 943 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 TDRD9Q8NDG6 1382 aaKnown RBP6.9□□□□□ -1.31
COPS3-216ENST00000579716 RNF103-CHMP3A0A140T963 221 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 MAGEB16A2A368 324 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 RHPN2P1A8MT19 583 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 RNF103O00237 685 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 AGRPO00253 132 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 SEMA7AO75326 666 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 PTP4A3O75365 173 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 PNPP00491 289 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 XRCC6P12956 609 aaKnown RBP eCLIP6.89□□□□□ -1.31
COPS3-216ENST00000579716 VEGFAP15692 232 aaPredicted RBP6.89□□□□□ -1.31
COPS3-216ENST00000579716 PDCP20941 246 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 PEX2P28328 305 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 SLC16A2P36021 539 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 NNMTP40261 264 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 STAT5BP51692 787 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 STARD6P59095 220 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 NOP14P78316 857 aaKnown RBP6.89□□□□□ -1.31
COPS3-216ENST00000579716 ACVR2BQ13705 512 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 BMPR2Q13873 1038 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 IDI1Q13907 227 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 NCAPHQ15003 741 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 STK38Q15208 465 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 FAM110CQ1W6H9 321 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 HSF5Q4G112 596 aaPredicted RBP6.89□□□□□ -1.31
COPS3-216ENST00000579716 FAM47CQ5HY64 1035 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 ATAT1Q5SQI0 421 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 RNF220Q5VTB9 566 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 PDPK2PQ6A1A2 396 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 WDR93Q6P2C0 686 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 GGT6Q6P531 493 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 PAPD4Q6PIY7 484 aaKnown RBP6.89□□□□□ -1.31
COPS3-216ENST00000579716 DCLRE1AQ6PJP8 1040 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 OVCH2Q7RTZ1 564 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 R3HCC1LQ7Z5L2 792 aaKnown RBP6.89□□□□□ -1.31
COPS3-216ENST00000579716 CAND1Q86VP6 1230 aaKnown RBP6.89□□□□□ -1.31
COPS3-216ENST00000579716 WDR49Q8IV35 697 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 WDR63Q8IWG1 891 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 HDDC3Q8N4P3 179 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 DPP10Q8N608 796 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 ARRDC4Q8NCT1 418 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 SLC5A11Q8WWX8 675 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 TBC1D5Q92609 795 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 C11orf24Q96F05 449 aaPredicted RBP6.89□□□□□ -1.31
COPS3-216ENST00000579716 CMTM3Q96MX0 182 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms