RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 MIER3Q7Z3K6 550 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 ADAT2Q7Z6V5 191 aaKnown RBP5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 FBXL6Q8N531 539 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 CHST14Q8NCH0 376 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 GPBAR1Q8TDU6 330 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 NLRP4Q96MN2 994 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 RIT2Q99578 217 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 ZFYVE21Q9BQ24 234 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 NUDT16L1Q9BRJ7 211 aaKnown RBP5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 FDXACB1Q9BRP7 624 aaPredicted RBP5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 TTLL2Q9BWV7 592 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 LGR4Q9BXB1 951 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 GTPBP4Q9BZE4 634 aaKnown RBP5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 RASSF4Q9H2L5 321 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 NRDE2Q9H7Z3 1164 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 MINDY3Q9H8M7 445 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 KCNMB3Q9NPA1 279 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 TOPORSQ9NS56 1045 aaPredicted RBP5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 KRT82Q9NSB4 513 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 AGPAT5Q9NUQ2 364 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 TBC1D13Q9NVG8 400 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 MARCH5Q9NX47 278 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 GPRC5BQ9NZH0 403 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 MARK1Q9P0L2 795 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 PADI4Q9UM07 663 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 SOX13Q9UN79 622 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 L1RE1Q9UN81 338 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 KCNJ14Q9UNX9 436 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 PIN4Q9Y237 131 aaKnown RBP5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 PCDHGB6Q9Y5F9 930 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 KIAA1549LQ6ZVL6 1849 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 DENND4CQ5VZ89 1909 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 WDFY3Q8IZQ1 3526 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 MYO16Q9Y6X6 1858 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 STK36Q9NRP7 1315 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 OTOGLQ3ZCN5 2332 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 FSD2A1L4K1 749 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 RNF223E7ERA6 249 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 MAFO75444 373 aaPredicted RBP5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 DDHD2O94830 711 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 DEXIO95424 95 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 CTDNEP1O95476 244 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 FAM157BP0CG42 384 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 CTSAP10619 480 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 ESRRAP11474 423 aaPredicted RBP5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 GPR3P46089 330 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 MECP2P51608 486 aaKnown RBP5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 USP11P51784 963 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 NAP1L1P55209 391 aaKnown RBP5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 NPEPPSP55786 919 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 NLRP5P59047 1200 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 ST3GAL1Q11201 340 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 SCRN1Q12765 414 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 SFSWAPQ12872 951 aaKnown RBP5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 PPP2R5CQ13362 524 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 CLEC16AQ2KHT3 1053 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 XKR3Q5GH77 459 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 RARS2Q5T160 578 aaKnown RBP5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 SLC35F1Q5T1Q4 408 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 TDRD10Q5VZ19 366 aaKnown RBP5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 MCTP2Q6DN12 878 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 TWF2Q6IBS0 349 aaKnown RBP5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 PGBD2Q6P3X8 592 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 MOXD1Q6UVY6 613 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 RFX8Q6ZV50 586 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 RUFY3Q7L099 469 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 VN1R5Q7Z5H4 357 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 ZNF410Q86VK4 478 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 ZNF280BQ86YH2 543 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 RHPN2Q8IUC4 686 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 DENND1CQ8IV53 801 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 RNF168Q8IYW5 571 aaPredicted RBP5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 ABI1Q8IZP0 508 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 BLIDQ8IZY5 108 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 ARHGEF39Q8N4T4 335 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 C12orf76Q8N812 135 aaPredicted RBP5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 TMEM105Q8N8V8 129 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 MRPL43Q8N983 215 aaKnown RBP5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 IGSF22Q8N9C0 903 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 RDM1Q8NG50 284 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 ZSCAN18Q8TBC5 510 aaPredicted RBP5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 BICD2Q8TD16 824 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 SLC22A17Q8WUG5 538 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 HAS1Q92839 578 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 CASP10Q92851 521 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 TNFRSF25Q93038 417 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 IGSF21Q96ID5 467 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 ZC3H10Q96K80 434 aaKnown RBP5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 MFSD14AQ96MC6 490 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 NSUN5Q96P11 429 aaKnown RBP5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 LXNQ9BS40 222 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 PHF20Q9BVI0 1012 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 MRPL9Q9BYD2 267 aaKnown RBP5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 BHMT2Q9H2M3 363 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 DHX33Q9H6R0 707 aaKnown RBP5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 PLEKHA5Q9HAU0 1116 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 TIMMDC1Q9NPL8 285 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 XPNPEP1Q9NQW7 623 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 FAM105AQ9NUU6 356 aa5.28□□□□□ -1.56
GAPLINC-202ENST00000579007 SPG21Q9NZD8 308 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms