RNA–Protein interactions for RNA: ENST00000562776.5

SIN3A-204, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 4

Gene SIN3A, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-204ENST00000562776 ATRIPQ8WXE1 791 aa11.62□□□□□ -0.55
SIN3A-204ENST00000562776 MSANTD3Q96H12 275 aa11.62□□□□□ -0.55
SIN3A-204ENST00000562776 LRRC3BQ96PB8 259 aa11.62□□□□□ -0.55
SIN3A-204ENST00000562776 NT5C1AQ9BXI3 368 aa11.62□□□□□ -0.55
SIN3A-204ENST00000562776 SMG9Q9H0W8 520 aaKnown RBP11.62□□□□□ -0.55
SIN3A-204ENST00000562776 EPC1Q9H2F5 836 aa11.62□□□□□ -0.55
SIN3A-204ENST00000562776 CHRDQ9H2X0 955 aa11.62□□□□□ -0.55
SIN3A-204ENST00000562776 KIF9Q9HAQ2 790 aa11.62□□□□□ -0.55
SIN3A-204ENST00000562776 DMAP1Q9NPF5 467 aaPredicted RBP11.62□□□□□ -0.55
SIN3A-204ENST00000562776 KRT82Q9NSB4 513 aa11.62□□□□□ -0.55
SIN3A-204ENST00000562776 PATJQ8NI35 1801 aa11.62□□□□□ -0.55
SIN3A-204ENST00000562776 VPS13AQ96RL7 3174 aa11.62□□□□□ -0.55
SIN3A-204ENST00000562776 PMM2O15305 246 aa11.61□□□□□ -0.55
SIN3A-204ENST00000562776 AP1G2O75843 785 aa11.61□□□□□ -0.55
SIN3A-204ENST00000562776 GNA14O95837 355 aa11.61□□□□□ -0.55
SIN3A-204ENST00000562776 TDGF1P13385 188 aa11.61□□□□□ -0.55
SIN3A-204ENST00000562776 CCDC130P13994 396 aa11.61□□□□□ -0.55
SIN3A-204ENST00000562776 PPP3CCP48454 512 aa11.61□□□□□ -0.55
SIN3A-204ENST00000562776 FMO5P49326 533 aa11.61□□□□□ -0.55
SIN3A-204ENST00000562776 MTAPQ13126 283 aa11.61□□□□□ -0.55
SIN3A-204ENST00000562776 ZNF268Q14587 947 aaPredicted RBP11.61□□□□□ -0.55
SIN3A-204ENST00000562776 TTC39CQ8N584 583 aa11.61□□□□□ -0.55
SIN3A-204ENST00000562776 C12orf29Q8N999 325 aa11.61□□□□□ -0.55
SIN3A-204ENST00000562776 FAM3CQ92520 227 aa11.61□□□□□ -0.55
SIN3A-204ENST00000562776 USP13Q92995 863 aaPredicted RBP11.61□□□□□ -0.55
SIN3A-204ENST00000562776 RMDN1Q96DB5 314 aa11.61□□□□□ -0.55
SIN3A-204ENST00000562776 IPO9Q96P70 1041 aaKnown RBP11.61□□□□□ -0.55
SIN3A-204ENST00000562776 GBP4Q96PP9 640 aa11.61□□□□□ -0.55
SIN3A-204ENST00000562776 KCNK16Q96T55 309 aa11.61□□□□□ -0.55
SIN3A-204ENST00000562776 ARID3AQ99856 593 aa11.61□□□□□ -0.55
SIN3A-204ENST00000562776 DNAI2Q9GZS0 605 aa11.61□□□□□ -0.55
SIN3A-204ENST00000562776 FAM124BQ9H5Z6 455 aaPredicted RBP11.61□□□□□ -0.55
SIN3A-204ENST00000562776 CSNK1G1Q9HCP0 422 aa11.61□□□□□ -0.55
SIN3A-204ENST00000562776 TRPC7Q9HCX4 862 aa11.61□□□□□ -0.55
SIN3A-204ENST00000562776 LMBRD1Q9NUN5 540 aa11.61□□□□□ -0.55
SIN3A-204ENST00000562776 FAM49BQ9NUQ9 324 aa11.61□□□□□ -0.55
SIN3A-204ENST00000562776 TDP1Q9NUW8 608 aa11.61□□□□□ -0.55
SIN3A-204ENST00000562776 DLL3Q9NYJ7 618 aa11.61□□□□□ -0.55
SIN3A-204ENST00000562776 TRPM5Q9NZQ8 1165 aa11.61□□□□□ -0.55
SIN3A-204ENST00000562776 RWDD2AQ9UIY3 292 aa11.61□□□□□ -0.55
SIN3A-204ENST00000562776 CCL26Q9Y258 94 aa11.61□□□□□ -0.55
SIN3A-204ENST00000562776 GREB1Q4ZG55 1949 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 TRAV19A0A0A6YYK7 116 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 C2orf78A6NCI8 922 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 ZNF840PA6NDX5 716 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 TNFRSF10BO14763 440 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 RTN3O95197 1032 aaPredicted RBP11.6□□□□□ -0.55
SIN3A-204ENST00000562776 USP17L7P0C7H9 530 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 CHRNB1P11230 501 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 PFKLP17858 780 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 PDE6CP51160 858 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 SLC5A3P53794 718 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 NRLP54845 237 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 MARSP56192 900 aaKnown RBP11.6□□□□□ -0.55
SIN3A-204ENST00000562776 PLCB2Q00722 1185 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 TAF10Q12962 218 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 PUM1Q14671 1186 aaKnown RBP eCLIP11.6□□□□□ -0.55
SIN3A-204ENST00000562776 ARHGAP29Q52LW3 1261 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 TRIM59Q8IWR1 403 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 KIAA2013Q8IYS2 634 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 NUP93Q8N1F7 819 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 DCLK2Q8N568 766 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 ZMIZ2Q8NF64 920 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 CSGALNACT1Q8TDX6 532 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 TATDN2Q93075 761 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 SLITRK1Q96PX8 696 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 SLC22A12Q96S37 553 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 HNRNPABQ99729 332 aaKnown RBP11.6□□□□□ -0.55
SIN3A-204ENST00000562776 SMOQ99835 787 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 SRRTQ9BXP5 876 aaKnown RBP11.6□□□□□ -0.55
SIN3A-204ENST00000562776 NUP62CLQ9H1M0 184 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 C8orf33Q9H7E9 229 aaPredicted RBP11.6□□□□□ -0.55
SIN3A-204ENST00000562776 LMAN1LQ9HAT1 526 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 CISHQ9NSE2 258 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 THG1LQ9NWX6 298 aaKnown RBP11.6□□□□□ -0.55
SIN3A-204ENST00000562776 GCNT4Q9P109 453 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 PIAS3Q9Y6X2 628 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 DENND4CQ5VZ89 1909 aa11.6□□□□□ -0.55
SIN3A-204ENST00000562776 KIF26AQ9ULI4 1882 aaPredicted RBP11.59□□□□□ -0.55
SIN3A-204ENST00000562776 F5P12259 2224 aa11.59□□□□□ -0.55
SIN3A-204ENST00000562776 TICRRQ7Z2Z1 1910 aa11.59□□□□□ -0.55
SIN3A-204ENST00000562776 P4HA2O15460 535 aa11.59□□□□□ -0.55
SIN3A-204ENST00000562776 BEST1O76090 585 aa11.59□□□□□ -0.55
SIN3A-204ENST00000562776 PAPSS2O95340 614 aaPredicted RBP11.59□□□□□ -0.55
SIN3A-204ENST00000562776 FGFR1OPO95684 399 aaKnown RBP11.59□□□□□ -0.55
SIN3A-204ENST00000562776 CKMP06732 381 aa11.59□□□□□ -0.55
SIN3A-204ENST00000562776 FAM200BP0CF97 657 aa11.59□□□□□ -0.55
SIN3A-204ENST00000562776 CCDC192P0DO97 292 aa11.59□□□□□ -0.55
SIN3A-204ENST00000562776 YWHAQP27348 245 aa11.59□□□□□ -0.55
SIN3A-204ENST00000562776 ADORA2BP29275 332 aa11.59□□□□□ -0.55
SIN3A-204ENST00000562776 CETN1Q12798 172 aa11.59□□□□□ -0.55
SIN3A-204ENST00000562776 USP4Q13107 963 aa11.59□□□□□ -0.55
SIN3A-204ENST00000562776 CUL2Q13617 745 aa11.59□□□□□ -0.55
SIN3A-204ENST00000562776 PPP2R5DQ14738 602 aa11.59□□□□□ -0.55
SIN3A-204ENST00000562776 ZNF394Q53GI3 561 aa11.59□□□□□ -0.55
SIN3A-204ENST00000562776 CLEC20AQ6ZU45 233 aa11.59□□□□□ -0.55
SIN3A-204ENST00000562776 ARL14EPQ8N8R7 260 aaPredicted RBP11.59□□□□□ -0.55
SIN3A-204ENST00000562776 MLKLQ8NB16 471 aa11.59□□□□□ -0.55
SIN3A-204ENST00000562776 PDZD8Q8NEN9 1154 aa11.59□□□□□ -0.55
SIN3A-204ENST00000562776 RIN3Q8TB24 985 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms