RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 ATAD1Q8NBU5 361 aa12.82□□□□□ -0.36
HERC1-205ENST00000559886 SPPL2BQ8TCT7 592 aa12.82□□□□□ -0.36
HERC1-205ENST00000559886 PIWIL1Q96J94 861 aaKnown RBP12.82□□□□□ -0.36
HERC1-205ENST00000559886 MCEEQ96PE7 176 aa12.82□□□□□ -0.36
HERC1-205ENST00000559886 ZBP1Q9H171 429 aa12.82□□□□□ -0.36
HERC1-205ENST00000559886 MRPL17Q9NRX2 175 aaKnown RBP12.82□□□□□ -0.36
HERC1-205ENST00000559886 LZTS1Q9Y250 596 aa12.82□□□□□ -0.36
HERC1-205ENST00000559886 ZNF638Q14966 1978 aaKnown RBP12.82□□□□□ -0.36
HERC1-205ENST00000559886 WDR27A2RRH5 827 aa12.82□□□□□ -0.36
HERC1-205ENST00000559886 F8VP50 259 aa12.82□□□□□ -0.36
HERC1-205ENST00000559886 LILRB3O75022 631 aa12.82□□□□□ -0.36
HERC1-205ENST00000559886 FTCDO95954 541 aa12.82□□□□□ -0.36
HERC1-205ENST00000559886 CTSAP10619 480 aa12.82□□□□□ -0.36
HERC1-205ENST00000559886 RFC1P35251 1148 aaPredicted RBP12.82□□□□□ -0.36
HERC1-205ENST00000559886 GRIK1P39086 918 aa12.82□□□□□ -0.36
HERC1-205ENST00000559886 MEI1Q5TIA1 1274 aa12.82□□□□□ -0.36
HERC1-205ENST00000559886 GPRIN1Q7Z2K8 1008 aa12.82□□□□□ -0.36
HERC1-205ENST00000559886 KHSRPQ92945 711 aaKnown RBP eCLIP12.82□□□□□ -0.365e-7■■■□□ 14.9
HERC1-205ENST00000559886 METTL5Q9NRN9 209 aaKnown RBP12.82□□□□□ -0.36
HERC1-205ENST00000559886 TMEM59LQ9UK28 342 aa12.82□□□□□ -0.36
HERC1-205ENST00000559886 PCDHA11Q9Y5I1 949 aa12.82□□□□□ -0.36
HERC1-205ENST00000559886 ALG6Q9Y672 507 aa12.82□□□□□ -0.36
HERC1-205ENST00000559886 C5orf67F2Z3F1 127 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 ENC1O14682 589 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 ARHGEF15O94989 841 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 TKTL1P51854 596 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 ADCY1Q08828 1119 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 SLC26A9Q7LBE3 791 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 NT5DC3Q86UY8 548 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 JOSD2Q8TAC2 188 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 FNIP1Q8TF40 1166 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 CLEC4CQ8WTT0 213 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 C8orf48Q96LL4 319 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 C17orf80Q9BSJ5 609 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.81□□□□□ -0.36
HERC1-205ENST00000559886 FNIP2Q9P278 1114 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 LCMT1Q9UIC8 334 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 SSX2IPQ9Y2D8 614 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 H0YGN5 161 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 TRIM66O15016 1216 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 PROSCO94903 275 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 ABLIM3O94929 683 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 FBXO21O94952 628 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 ATP1A1P05023 1023 aaKnown RBP12.81□□□□□ -0.36
HERC1-205ENST00000559886 DNAJB2P25686 324 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 NDUFV1P49821 464 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 PAPD7Q5XG87 772 aaKnown RBP12.81□□□□□ -0.36
HERC1-205ENST00000559886 ARCQ7LC44 396 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 PEX26Q7Z412 305 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 SIX6OS1Q8N1H7 587 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 TTC9BQ8N6N2 239 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 ZNF461Q8TAF7 563 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 UBE2Q2Q8WVN8 375 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 AUTS2Q8WXX7 1259 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 TLR10Q9BXR5 811 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 CRISPLD1Q9H336 500 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 RXFP1Q9HBX9 757 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 CNGB3Q9NQW8 809 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 IP6K2Q9UHH9 426 aa12.81□□□□□ -0.36
HERC1-205ENST00000559886 TMEM110-MUSTN1A8MSY1 372 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 TNFRSF10BO14763 440 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 RB1P06400 928 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 CA3P07451 260 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 HAPLN1P10915 354 aaPredicted RBP12.8□□□□□ -0.36
HERC1-205ENST00000559886 MRPS5P82675 430 aaKnown RBP12.8□□□□□ -0.36
HERC1-205ENST00000559886 OGDHQ02218 1023 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 CREMQ03060 361 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 ZNF252P-AS1Q0IIN9 211 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 RAB33AQ14088 237 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 TAF5Q15542 800 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 EFHC1Q5JVL4 640 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 TPGS2Q68CL5 300 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 SCN4BQ8IWT1 228 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 SCML4Q8N228 414 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 ULBP1Q9BZM6 244 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 AFF4Q9UHB7 1163 aaKnown RBP12.8□□□□□ -0.36
HERC1-205ENST00000559886 AMFRQ9UKV5 643 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 MYO16Q9Y6X6 1858 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 C2CD4BA6NLJ0 364 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 COMTP21964 271 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 MAN1A1P33908 653 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 SLC1A1P43005 524 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 UBE3AQ05086 875 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 DUSP4Q13115 394 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 PM20D1Q6GTS8 502 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 SPRED2Q7Z698 418 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 EMC1Q8N766 993 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 NIPA2Q8N8Q9 360 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 SPPL3Q8TCT6 385 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 SAMD11Q96NU1 681 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 ALG13Q9NP73 1137 aaKnown RBP12.8□□□□□ -0.36
HERC1-205ENST00000559886 HSFX1Q9UBD0 423 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 SLC27A5Q9Y2P5 690 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 HYOU1Q9Y4L1 999 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 USP3Q9Y6I4 520 aa12.8□□□□□ -0.36
HERC1-205ENST00000559886 CHD7Q9P2D1 2997 aa12.79□□□□□ -0.36
HERC1-205ENST00000559886 PLXNA3P51805 1871 aa12.79□□□□□ -0.36
HERC1-205ENST00000559886 TNRC18O15417 2968 aaPredicted RBP12.79□□□□□ -0.36
HERC1-205ENST00000559886 NCK2O43639 380 aa12.79□□□□□ -0.36
HERC1-205ENST00000559886 ZBED1O96006 694 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms