RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 SFTPA1Q8IWL2 248 aa5.91□□□□□ -1.46
SMAD3-209ENST00000558894 HSCBQ8IWL3 235 aa5.91□□□□□ -1.46
SMAD3-209ENST00000558894 SCN4BQ8IWT1 228 aa5.91□□□□□ -1.46
SMAD3-209ENST00000558894 ADGRG2Q8IZP9 1017 aa5.91□□□□□ -1.46
SMAD3-209ENST00000558894 FUKQ8N0W3 1084 aa5.91□□□□□ -1.46
SMAD3-209ENST00000558894 CRYBG2Q8N1P7 616 aa5.91□□□□□ -1.46
SMAD3-209ENST00000558894 PHTF2Q8N3S3 785 aa5.91□□□□□ -1.46
SMAD3-209ENST00000558894 B3GALNT2Q8NCR0 500 aa5.91□□□□□ -1.46
SMAD3-209ENST00000558894 SH3RF2Q8TEC5 729 aa5.91□□□□□ -1.46
SMAD3-209ENST00000558894 WHAMMQ8TF30 809 aa5.91□□□□□ -1.46
SMAD3-209ENST00000558894 MRPS31Q92665 395 aaKnown RBP5.91□□□□□ -1.46
SMAD3-209ENST00000558894 WBP2Q969T9 261 aa5.91□□□□□ -1.46
SMAD3-209ENST00000558894 GCNAQ96QF7 691 aa5.91□□□□□ -1.46
SMAD3-209ENST00000558894 TWNKQ96RR1 684 aa5.91□□□□□ -1.46
SMAD3-209ENST00000558894 MMS19Q96T76 1030 aa5.91□□□□□ -1.46
SMAD3-209ENST00000558894 GOLPH3LQ9H4A5 285 aa5.91□□□□□ -1.46
SMAD3-209ENST00000558894 SMYD3Q9H7B4 428 aa5.91□□□□□ -1.46
SMAD3-209ENST00000558894 ECT2Q9H8V3 914 aa5.91□□□□□ -1.46
SMAD3-209ENST00000558894 CSNK1G1Q9HCP0 422 aa5.91□□□□□ -1.46
SMAD3-209ENST00000558894 THG1LQ9NWX6 298 aaKnown RBP5.91□□□□□ -1.46
SMAD3-209ENST00000558894 DUS2Q9NX74 493 aaKnown RBP5.91□□□□□ -1.46
SMAD3-209ENST00000558894 FAM13BQ9NYF5 915 aa5.91□□□□□ -1.46
SMAD3-209ENST00000558894 UXTQ9UBK9 157 aaPredicted RBP5.91□□□□□ -1.46
SMAD3-209ENST00000558894 HMGXB4Q9UGU5 601 aa5.91□□□□□ -1.46
SMAD3-209ENST00000558894 HCN2Q9UL51 889 aa5.91□□□□□ -1.46
SMAD3-209ENST00000558894 TRAF3IP3Q9Y228 551 aa5.91□□□□□ -1.46
SMAD3-209ENST00000558894 ADAMTS9Q9P2N4 1935 aa5.91□□□□□ -1.46
SMAD3-209ENST00000558894 MUC22E2RYF6 1773 aaPredicted RBP5.9□□□□□ -1.46
SMAD3-209ENST00000558894 ABCA7Q8IZY2 2146 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 ACACBO00763 2458 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 CCDC163A0A0D9SF12 145 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 A8MXQ7 604 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 HHLA1C9JL84 531 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 LEFTY2O00292 366 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 IKBKBO14920 756 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 TRIM66O15016 1216 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 EXOC3O60645 756 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 RNF40O75150 1001 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 AKAP3O75969 853 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 RHOBTB3O94955 611 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 ASS1P00966 412 aaKnown RBP5.9□□□□□ -1.46
SMAD3-209ENST00000558894 NR3C1P04150 777 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 RPN1P04843 607 aaKnown RBP5.9□□□□□ -1.46
SMAD3-209ENST00000558894 CYP17A1P05093 508 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 MYL1P05976 194 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 CKMP06732 381 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 HNRNPLP14866 589 aaKnown RBP eCLIP5.9□□□□□ -1.46
SMAD3-209ENST00000558894 PFKLP17858 780 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 DRD1P21728 446 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 CNR2P34972 360 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 GRIK1P39086 918 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 PXNP49023 591 aaPredicted RBP5.9□□□□□ -1.46
SMAD3-209ENST00000558894 AP3M2P53677 418 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 ATXN1P54253 815 aaKnown RBP5.9□□□□□ -1.46
SMAD3-209ENST00000558894 PPP3CAQ08209 521 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 SPEM2Q0P670 501 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 TAF10Q12962 218 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 ORC1Q13415 861 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 SIM2Q14190 667 aaPredicted RBP5.9□□□□□ -1.46
SMAD3-209ENST00000558894 PUM1Q14671 1186 aaKnown RBP eCLIP5.9□□□□□ -1.46
SMAD3-209ENST00000558894 MAPRE1Q15691 268 aaKnown RBP5.9□□□□□ -1.46
SMAD3-209ENST00000558894 TAF12Q16514 161 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 PLA2G2CQ5R387 149 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 HEATR6Q6AI08 1181 aaKnown RBP5.9□□□□□ -1.46
SMAD3-209ENST00000558894 LAIR1Q6GTX8 287 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 SPOPLQ6IQ16 392 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 RHBDF2Q6PJF5 856 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 KRBA2Q6ZNG9 492 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 SV2AQ7L0J3 742 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 SYT13Q7L8C5 426 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 HS2ST1Q7LGA3 356 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 C12orf40Q86WS4 652 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 FAM160A2Q8N612 972 aaPredicted RBP5.9□□□□□ -1.46
SMAD3-209ENST00000558894 KIAA1958Q8N8K9 716 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 OR6B3Q8NGW1 331 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 SCAMP5Q8TAC9 235 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 GOLGA5Q8TBA6 731 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 TMC2Q8TDI7 906 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 UBE2Q2Q8WVN8 375 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 P2RY11Q96G91 374 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 ZC3H10Q96K80 434 aaKnown RBP5.9□□□□□ -1.46
SMAD3-209ENST00000558894 FNBP1Q96RU3 617 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 SMOQ99835 787 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 DUSP9Q99956 384 aaKnown RBP5.9□□□□□ -1.46
SMAD3-209ENST00000558894 P2RY13Q9BPV8 354 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 ELOVL4Q9GZR5 314 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 SNX25Q9H3E2 840 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 APOBEC3GQ9HC16 384 aaKnown RBP5.9□□□□□ -1.46
SMAD3-209ENST00000558894 TRPC7Q9HCX4 862 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 OSER1Q9NX31 292 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 NCDNQ9UBB6 729 aa5.9□□□□□ -1.46
SMAD3-209ENST00000558894 NXF1Q9UBU9 619 aaKnown RBP5.9□□□□□ -1.46
SMAD3-209ENST00000558894 RALYQ9UKM9 306 aaKnown RBP5.9□□□□□ -1.46
SMAD3-209ENST00000558894 NYNRINQ9P2P1 1898 aaKnown RBP5.9□□□□□ -1.47
SMAD3-209ENST00000558894 PCDH15Q96QU1 1955 aa5.89□□□□□ -1.47
SMAD3-209ENST00000558894 A0A1W2PQ27 194 aa5.89□□□□□ -1.47
SMAD3-209ENST00000558894 A0A1W2PQ64 194 aa5.89□□□□□ -1.47
SMAD3-209ENST00000558894 A0A1W2PQD8 194 aa5.89□□□□□ -1.47
SMAD3-209ENST00000558894 TM4SF5O14894 197 aa5.89□□□□□ -1.47
SMAD3-209ENST00000558894 MAPK13O15264 365 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms