RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 DCUN1D2Q6PH85 259 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 SCN4BQ8IWT1 228 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 KIF18AQ8NI77 898 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 MCRS1Q96EZ8 462 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 HERC2P3Q9BVR0 1158 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 LRRC4Q9HBW1 653 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 CSNK1G1Q9HCP0 422 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 MRPL47Q9HD33 250 aaKnown RBP10.74□□□□□ -0.69
SRP54-208ENST00000555557 PCDHB5Q9Y5E4 795 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 ALG6Q9Y672 507 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 SCINQ9Y6U3 715 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 MTMR11A4FU01 709 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 CTAGE9A4FU28 777 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 TMEM191CA6NGB0 347 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 SIGLEC16A6NMB1 481 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 MYO1FO00160 1098 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 MTA2O94776 668 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 URODP06132 367 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 TKTL1P51854 596 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 HADHBP55084 474 aaKnown RBP10.74□□□□□ -0.69
SRP54-208ENST00000555557 ADCY1Q08828 1119 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 DUSP4Q13115 394 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 NFE2Q16621 373 aaPredicted RBP10.74□□□□□ -0.69
SRP54-208ENST00000555557 CFAP221Q4G0U5 840 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 OLFML1Q6UWY5 402 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 SCAMP5Q8TAC9 235 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 GPR152Q8TDT2 470 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 KHSRPQ92945 711 aaKnown RBP eCLIP10.74□□□□□ -0.699e-8■□□□□ 9.3
SRP54-208ENST00000555557 PSMB7Q99436 277 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 NAPGQ99747 312 aaPredicted RBP10.74□□□□□ -0.69
SRP54-208ENST00000555557 GDF15Q99988 308 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 DMAP1Q9NPF5 467 aaPredicted RBP10.74□□□□□ -0.69
SRP54-208ENST00000555557 WDR35Q9P2L0 1181 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 JRKLQ9Y4A0 524 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 BACE2Q9Y5Z0 518 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 TUBB4AP04350 444 aa10.73□□□□□ -0.69
SRP54-208ENST00000555557 USP17L7P0C7H9 530 aa10.73□□□□□ -0.69
SRP54-208ENST00000555557 COMTP21964 271 aa10.73□□□□□ -0.69
SRP54-208ENST00000555557 DNAJB1P25685 340 aa10.73□□□□□ -0.69
SRP54-208ENST00000555557 ACADSBP45954 432 aa10.73□□□□□ -0.69
SRP54-208ENST00000555557 GSCP56915 257 aaPredicted RBP10.73□□□□□ -0.69
SRP54-208ENST00000555557 ERVFC1P60507 584 aa10.73□□□□□ -0.69
SRP54-208ENST00000555557 SLC6A3Q01959 620 aa10.73□□□□□ -0.69
SRP54-208ENST00000555557 ZNF252P-AS1Q0IIN9 211 aa10.73□□□□□ -0.69
SRP54-208ENST00000555557 IFRD2Q12894 506 aaPredicted RBP10.73□□□□□ -0.69
SRP54-208ENST00000555557 MGAT5BQ3V5L5 792 aa10.73□□□□□ -0.69
SRP54-208ENST00000555557 TRNP1Q6NT89 227 aa10.73□□□□□ -0.69
SRP54-208ENST00000555557 SLFN11Q7Z7L1 901 aa10.73□□□□□ -0.69
SRP54-208ENST00000555557 NT5DC3Q86UY8 548 aa10.73□□□□□ -0.69
SRP54-208ENST00000555557 KCTD13Q8WZ19 329 aa10.73□□□□□ -0.69
SRP54-208ENST00000555557 SEPT5Q99719 369 aaPredicted RBP10.73□□□□□ -0.69
SRP54-208ENST00000555557 TLR10Q9BXR5 811 aa10.73□□□□□ -0.69
SRP54-208ENST00000555557 ULBP1Q9BZM6 244 aa10.73□□□□□ -0.69
SRP54-208ENST00000555557 ZBP1Q9H171 429 aa10.73□□□□□ -0.69
SRP54-208ENST00000555557 CERS4Q9HA82 394 aa10.73□□□□□ -0.69
SRP54-208ENST00000555557 ABCB6Q9NP58 842 aa10.73□□□□□ -0.69
SRP54-208ENST00000555557 MRPL17Q9NRX2 175 aaKnown RBP10.73□□□□□ -0.69
SRP54-208ENST00000555557 YBX2Q9Y2T7 364 aaKnown RBP10.73□□□□□ -0.69
SRP54-208ENST00000555557 MYH10P35580 1976 aa10.73□□□□□ -0.69
SRP54-208ENST00000555557 CHD7Q9P2D1 2997 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 CARNS1A5YM72 827 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 LILRB3O75022 631 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 SRGAP2O75044 1071 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 URI1O94763 535 aaPredicted RBP10.72□□□□□ -0.69
SRP54-208ENST00000555557 CXCR5P32302 372 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 FLT3P36888 993 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 SNX16P57768 344 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 RAB41Q5JT25 222 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 MEI1Q5TIA1 1274 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 HFE2Q6ZVN8 426 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 TMC7Q7Z402 723 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 PEX26Q7Z412 305 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 SIX6OS1Q8N1H7 587 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 FUBP3Q96I24 572 aaKnown RBP eCLIP10.72□□□□□ -0.69
SRP54-208ENST00000555557 CYLDQ9NQC7 956 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 TMEM59LQ9UK28 342 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 USTQ9Y2C2 406 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 KIAA1671Q9BY89 1806 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 TEX28O15482 410 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 SEC24AO95486 1093 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 CXCL14O95715 111 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 CTSAP10619 480 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 SLC5A3P53794 718 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 MRPS5P82675 430 aaKnown RBP10.72□□□□□ -0.69
SRP54-208ENST00000555557 C11orf63Q6NUN7 778 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 VSTM1Q6UX27 236 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 ZDHHC17Q8IUH5 632 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 SYCE1Q8N0S2 351 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 ZNF461Q8TAF7 563 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 SPPL3Q8TCT6 385 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 POF1BQ8WVV4 589 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 RXFP2Q8WXD0 754 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 FAM149B1Q96BN6 582 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 CFAP57Q96MR6 1250 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 TCF25Q9BQ70 676 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 OXCT2Q9BYC2 517 aaPredicted RBP10.72□□□□□ -0.69
SRP54-208ENST00000555557 PBX4Q9BYU1 374 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 UBXN6Q9BZV1 441 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 AMFRQ9UKV5 643 aa10.72□□□□□ -0.69
SRP54-208ENST00000555557 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms