RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 C16orf59Q7L2K0 433 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 RIOX2Q8IUF8 465 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 IQCKQ8N0W5 287 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 KLHDC9Q8NEP7 349 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 ACTRT1Q8TDG2 376 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 HERVK_113Q902F9 699 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 RRP36Q96EU6 259 aaKnown RBP6.35□□□□□ -1.39
VPS33B-203ENST00000554264 CDK5RAP3Q96JB5 506 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 CAPZA3Q96KX2 299 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 TRIM55Q9BYV6 548 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 STMN4Q9H169 189 aaPredicted RBP6.35□□□□□ -1.39
VPS33B-203ENST00000554264 ISCUQ9H1K1 167 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 NKX2-4Q9H2Z4 354 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 VCPKMTQ9H867 229 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 SPC25Q9HBM1 224 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 PLCB1Q9NQ66 1216 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 HDAC6Q9UBN7 1215 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 PCDHA6Q9UN73 950 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 ADAMTS5Q9UNA0 930 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 PCDHA8Q9Y5H6 950 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 BACE2Q9Y5Z0 518 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 A0A0G2JMZ2 1700 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 MUC3AQ02505 3323 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 LOXHD1Q8IVV2 1947 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 DNAH12Q6ZR08 3092 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 GOLGA6L10A0A0M3HER8 536 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 TRIM49BA6NDI0 452 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 GCOM1H8Y6P7 765 aaPredicted RBP6.34□□□□□ -1.39
VPS33B-203ENST00000554264 ARVCFO00192 962 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 PAX4O43316 350 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 DUSP11O75319 330 aaKnown RBP6.34□□□□□ -1.39
VPS33B-203ENST00000554264 PRDM1O75626 825 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 FGBP02675 491 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 PGK2P07205 417 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 ASGR1P07306 291 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 CCDC172P0C7W6 258 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 MYZAPP0CAP1 466 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 GHRP10912 638 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 NAT2P11245 290 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 CSF2RAP15509 400 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 ENDOUP21128 410 aaKnown RBP6.34□□□□□ -1.39
VPS33B-203ENST00000554264 SDHBP21912 280 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 CDC25AP30304 524 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 LSP1P33241 339 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 STAT3P40763 770 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 MDH1P40925 334 aaKnown RBP6.34□□□□□ -1.39
VPS33B-203ENST00000554264 CDK7P50613 346 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 NAP1L1P55209 391 aaKnown RBP6.34□□□□□ -1.39
VPS33B-203ENST00000554264 GSCP56915 257 aaPredicted RBP6.34□□□□□ -1.39
VPS33B-203ENST00000554264 MVKQ03426 396 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 ICA1Q05084 483 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 C2orf54Q08AI8 447 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 IL17AQ16552 155 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 SLC18A3Q16572 532 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 MLANAQ16655 118 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 ASTE1Q2TB18 679 aaPredicted RBP6.34□□□□□ -1.39
VPS33B-203ENST00000554264 KRT79Q5XKE5 535 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 EEF1DP3Q658K8 133 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 MBLAC2Q68D91 279 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 ANKRD40Q6AI12 368 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 CCSAPQ6IQ19 270 aaPredicted RBP6.34□□□□□ -1.39
VPS33B-203ENST00000554264 MAMDC4Q6UXC1 1216 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 MAATS1Q7Z4T9 603 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 HOOK3Q86VS8 718 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 CPNE8Q86YQ8 564 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 MYOCDQ8IZQ8 938 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 NAT16Q8N8M0 369 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 CCDC26Q8TAB7 109 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 SDR42E1Q8WUS8 393 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 LARP4BQ92615 738 aaKnown RBP6.34□□□□□ -1.39
VPS33B-203ENST00000554264 CENPTQ96BT3 561 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 RUNDC3BQ96NL0 473 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 LRRC1Q9BTT6 524 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 SEZ6LQ9BYH1 1024 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 IL23AQ9NPF7 189 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 DCP1AQ9NPI6 582 aaPredicted RBP6.34□□□□□ -1.39
VPS33B-203ENST00000554264 CYP26B1Q9NR63 512 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 FAM114A2Q9NRY5 505 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 AGPAT5Q9NUQ2 364 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 MCM9Q9NXL9 1143 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 AIPL1Q9NZN9 384 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 ARHGAP20Q9P2F6 1191 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 ACSL6Q9UKU0 697 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 TMX2Q9Y320 296 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 COL4A3BPQ9Y5P4 624 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 MYH10P35580 1976 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 CDK5RAP2Q96SN8 1893 aa6.34□□□□□ -1.39
VPS33B-203ENST00000554264 PLIN4Q96Q06 1357 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 A0A0U1RQJ8 604 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 A0A1B0GUA9 196 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 FAM221BA6H8Z2 402 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 VWA5AO00534 786 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 HEXIM1O94992 359 aaKnown RBP6.33□□□□□ -1.4
VPS33B-203ENST00000554264 THBDP07204 575 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 GSTA1P08263 222 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 C6orf222P0C671 652 aaPredicted RBP6.33□□□□□ -1.4
VPS33B-203ENST00000554264 TSPY3P0CV98 308 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 TSPY8P0CW00 308 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 MYBP10242 640 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 PLS3P13797 630 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms