RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 PANK4Q9NVE7 773 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 MAGEC2Q9UBF1 373 aaPredicted RBP9.44□□□□□ -0.9
TDP1-208ENST00000553989 RCOR1Q9UKL0 485 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 INVSQ9Y283 1065 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 GREB1Q4ZG55 1949 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 ACACBO00763 2458 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 ATG2BQ96BY7 2078 aa9.43□□□□□ -0.9
TDP1-208ENST00000553989 PRPF6O94906 941 aaKnown RBP9.43□□□□□ -0.9
TDP1-208ENST00000553989 PDGFRBP09619 1106 aa9.43□□□□□ -0.9
TDP1-208ENST00000553989 BDNFP23560 247 aa9.43□□□□□ -0.9
TDP1-208ENST00000553989 NOVA1P51513 510 aaKnown RBP9.43□□□□□ -0.9
TDP1-208ENST00000553989 IFRD2Q12894 506 aaPredicted RBP9.43□□□□□ -0.9
TDP1-208ENST00000553989 MAPRE1Q15691 268 aaKnown RBP9.43□□□□□ -0.9
TDP1-208ENST00000553989 SOWAHAQ2M3V2 549 aa9.43□□□□□ -0.9
TDP1-208ENST00000553989 EML3Q32P44 896 aa9.43□□□□□ -0.9
TDP1-208ENST00000553989 USP39Q53GS9 565 aaKnown RBP9.43□□□□□ -0.9
TDP1-208ENST00000553989 C2orf27AQ580R0 203 aa9.43□□□□□ -0.9
TDP1-208ENST00000553989 PLA2G2CQ5R387 149 aa9.43□□□□□ -0.9
TDP1-208ENST00000553989 ANO7Q6IWH7 933 aa9.43□□□□□ -0.9
TDP1-208ENST00000553989 PSAPL1Q6NUJ1 521 aa9.43□□□□□ -0.9
TDP1-208ENST00000553989 RBM43Q6ZSC3 357 aaKnown RBP9.43□□□□□ -0.9
TDP1-208ENST00000553989 DENND5BQ6ZUT9 1274 aa9.43□□□□□ -0.9
TDP1-208ENST00000553989 CCDC65Q8IXS2 484 aa9.43□□□□□ -0.9
TDP1-208ENST00000553989 SPATA18Q8TC71 538 aa9.43□□□□□ -0.9
TDP1-208ENST00000553989 HPDLQ96IR7 371 aa9.43□□□□□ -0.9
TDP1-208ENST00000553989 ZC3H10Q96K80 434 aaKnown RBP9.43□□□□□ -0.9
TDP1-208ENST00000553989 MYRFLQ96LU7 910 aa9.43□□□□□ -0.9
TDP1-208ENST00000553989 DUSP15Q9H1R2 295 aaPredicted RBP9.43□□□□□ -0.9
TDP1-208ENST00000553989 TNMDQ9H2S6 317 aa9.43□□□□□ -0.9
TDP1-208ENST00000553989 NPDC1Q9NQX5 325 aaPredicted RBP9.43□□□□□ -0.9
TDP1-208ENST00000553989 OLFML3Q9NRN5 406 aa9.43□□□□□ -0.9
TDP1-208ENST00000553989 GDAP2Q9NXN4 497 aa9.43□□□□□ -0.9
TDP1-208ENST00000553989 EHD2Q9NZN4 543 aa9.43□□□□□ -0.9
TDP1-208ENST00000553989 TRPM5Q9NZQ8 1165 aa9.43□□□□□ -0.9
TDP1-208ENST00000553989 SIX4Q9UIU6 781 aa9.43□□□□□ -0.9
TDP1-208ENST00000553989 FBXO2Q9UK22 296 aaPredicted RBP9.43□□□□□ -0.9
TDP1-208ENST00000553989 CDH9Q9ULB4 789 aa9.43□□□□□ -0.9
TDP1-208ENST00000553989 OBSL1O75147 1896 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 EPG5Q9HCE0 2579 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 SPAG17Q6Q759 2223 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 ZNF233A6NK53 670 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 GABRDO14764 452 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 KIAA0391O15091 583 aaKnown RBP9.42□□□□□ -0.9
TDP1-208ENST00000553989 ATP2C2O75185 946 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 KCNK5O95279 499 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 PMLP29590 882 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 MAGEA11P43364 429 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 DHPSP49366 369 aaPredicted RBP9.42□□□□□ -0.9
TDP1-208ENST00000553989 SURF1Q15526 300 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 DAB2IPQ5VWQ8 1189 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 FAM173BQ6P4H8 233 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 VSTM1Q6UX27 236 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 HS2ST1Q7LGA3 356 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 CYP2U1Q7Z449 544 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 C11orf74Q86VG3 221 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 CCDC33Q8N5R6 958 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 PDILTQ8N807 584 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 OR6B3Q8NGW1 331 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 DNAJC19Q96DA6 116 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 PKMYT1Q99640 499 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 LSM14BQ9BX40 385 aaKnown RBP9.42□□□□□ -0.9
TDP1-208ENST00000553989 STRA6Q9BX79 667 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 FGFBP2Q9BYJ0 223 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 LINC00597Q9H2U6 94 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 SNX25Q9H3E2 840 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 CLSTN2Q9H4D0 955 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 SPTLC3Q9NUV7 552 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 INTS13Q9NVM9 706 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 SMPD4Q9NXE4 827 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 BCCIPQ9P287 314 aaKnown RBP eCLIP9.42□□□□□ -0.9
TDP1-208ENST00000553989 EBF1Q9UH73 591 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 METRNQ9UJH8 293 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 ARHGAP26Q9UNA1 814 aa9.42□□□□□ -0.9
TDP1-208ENST00000553989 SRPRBQ9Y5M8 271 aaKnown RBP9.42□□□□□ -0.9
TDP1-208ENST00000553989 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.42□□□□□ -0.9
TDP1-208ENST00000553989 DENND4CQ5VZ89 1909 aa9.41□□□□□ -0.9
TDP1-208ENST00000553989 BCLAF3A2AJT9 711 aaKnown RBP9.41□□□□□ -0.9
TDP1-208ENST00000553989 C4orf47A7E2U8 309 aa9.41□□□□□ -0.9
TDP1-208ENST00000553989 LEFTY2O00292 366 aa9.41□□□□□ -0.9
TDP1-208ENST00000553989 SCAMP3O14828 347 aaKnown RBP9.41□□□□□ -0.9
TDP1-208ENST00000553989 KHNYNO15037 678 aaKnown RBP9.41□□□□□ -0.9
TDP1-208ENST00000553989 ALDH1A2O94788 518 aa9.41□□□□□ -0.9
TDP1-208ENST00000553989 DLATP10515 647 aaKnown RBP9.41□□□□□ -0.9
TDP1-208ENST00000553989 MBL2P11226 248 aaPredicted RBP9.41□□□□□ -0.9
TDP1-208ENST00000553989 TNNI1P19237 187 aa9.41□□□□□ -0.9
TDP1-208ENST00000553989 LMO2P25791 158 aa9.41□□□□□ -0.9
TDP1-208ENST00000553989 TNNC1P63316 161 aa9.41□□□□□ -0.9
TDP1-208ENST00000553989 DUOXA2Q1HG44 320 aa9.41□□□□□ -0.9
TDP1-208ENST00000553989 MDH1BQ5I0G3 518 aa9.41□□□□□ -0.9
TDP1-208ENST00000553989 SCARA3Q6AZY7 606 aa9.41□□□□□ -0.9
TDP1-208ENST00000553989 FAM171BQ6P995 826 aa9.41□□□□□ -0.9
TDP1-208ENST00000553989 DPH6Q7L8W6 267 aa9.41□□□□□ -0.9
TDP1-208ENST00000553989 FILIP1Q7Z7B0 1213 aa9.41□□□□□ -0.9
TDP1-208ENST00000553989 CBWD2Q8IUF1 395 aa9.41□□□□□ -0.9
TDP1-208ENST00000553989 RDH13Q8NBN7 331 aa9.41□□□□□ -0.9
TDP1-208ENST00000553989 OR5B17Q8NGF7 314 aa9.41□□□□□ -0.9
TDP1-208ENST00000553989 USP33Q8TEY7 942 aa9.41□□□□□ -0.9
TDP1-208ENST00000553989 KBTBD7Q8WVZ9 684 aa9.41□□□□□ -0.9
TDP1-208ENST00000553989 EZH1Q92800 747 aaPredicted RBP9.41□□□□□ -0.9
TDP1-208ENST00000553989 PCED1BQ96HM7 432 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms