RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 FREM2Q5SZK8 3169 aa17.56■□□□□ 0.4
SSH1-208ENST00000548522 ATXN2Q99700 1313 aaKnown RBP17.56■□□□□ 0.4
SSH1-208ENST00000548522 KHNYNO15037 678 aaKnown RBP17.56■□□□□ 0.4
SSH1-208ENST00000548522 KLF8O95600 359 aaPredicted RBP17.56■□□□□ 0.4
SSH1-208ENST00000548522 ABL1P00519 1130 aa17.56■□□□□ 0.4
SSH1-208ENST00000548522 OAS1P00973 400 aaKnown RBP17.56■□□□□ 0.4
SSH1-208ENST00000548522 TNNC2P02585 160 aa17.56■□□□□ 0.4
SSH1-208ENST00000548522 ANXA13P27216 316 aa17.56■□□□□ 0.4
SSH1-208ENST00000548522 TIE1P35590 1138 aa17.56■□□□□ 0.4
SSH1-208ENST00000548522 PTGER3P43115 390 aa17.56■□□□□ 0.4
SSH1-208ENST00000548522 SLC7A9P82251 487 aa17.56■□□□□ 0.4
SSH1-208ENST00000548522 KDSRQ06136 332 aa17.56■□□□□ 0.4
SSH1-208ENST00000548522 IFRD2Q12894 506 aaPredicted RBP17.56■□□□□ 0.4
SSH1-208ENST00000548522 ALCAMQ13740 583 aa17.56■□□□□ 0.4
SSH1-208ENST00000548522 DHCR24Q15392 516 aa17.56■□□□□ 0.4
SSH1-208ENST00000548522 DAB2IPQ5VWQ8 1189 aa17.56■□□□□ 0.4
SSH1-208ENST00000548522 DPH6Q7L8W6 267 aa17.56■□□□□ 0.4
SSH1-208ENST00000548522 PDILTQ8N807 584 aa17.56■□□□□ 0.4
SSH1-208ENST00000548522 IL17RCQ8NAC3 791 aa17.56■□□□□ 0.4
SSH1-208ENST00000548522 OLIG1Q8TAK6 271 aa17.56■□□□□ 0.4
SSH1-208ENST00000548522 MYCBPAPQ8TBZ2 947 aa17.56■□□□□ 0.4
SSH1-208ENST00000548522 PIGKQ92643 395 aa17.56■□□□□ 0.4
SSH1-208ENST00000548522 FNBP1Q96RU3 617 aa17.56■□□□□ 0.4
SSH1-208ENST00000548522 MMS19Q96T76 1030 aa17.56■□□□□ 0.4
SSH1-208ENST00000548522 TMEM121BQ9BXQ6 578 aaPredicted RBP17.56■□□□□ 0.4
SSH1-208ENST00000548522 ZNF518BQ9C0D4 1074 aa17.56■□□□□ 0.4
SSH1-208ENST00000548522 HSPBP1Q9NZL4 362 aa17.56■□□□□ 0.4
SSH1-208ENST00000548522 CLDN5O00501 218 aa17.55■□□□□ 0.4
SSH1-208ENST00000548522 ADAM23O75077 832 aa17.55■□□□□ 0.4
SSH1-208ENST00000548522 PDE6CP51160 858 aa17.55■□□□□ 0.4
SSH1-208ENST00000548522 TAF10Q12962 218 aa17.55■□□□□ 0.4
SSH1-208ENST00000548522 DUOXA2Q1HG44 320 aa17.55■□□□□ 0.4
SSH1-208ENST00000548522 UAP1L1Q3KQV9 507 aa17.55■□□□□ 0.4
SSH1-208ENST00000548522 RHBDF2Q6PJF5 856 aa17.55■□□□□ 0.4
SSH1-208ENST00000548522 CCDC73Q6ZRK6 1079 aa17.55■□□□□ 0.4
SSH1-208ENST00000548522 HS2ST1Q7LGA3 356 aa17.55■□□□□ 0.4
SSH1-208ENST00000548522 TRAPPC11Q7Z392 1133 aa17.55■□□□□ 0.4
SSH1-208ENST00000548522 ADGRG2Q8IZP9 1017 aa17.55■□□□□ 0.4
SSH1-208ENST00000548522 DEFB124Q8NES8 71 aa17.55■□□□□ 0.4
SSH1-208ENST00000548522 USP28Q96RU2 1077 aa17.55■□□□□ 0.4
SSH1-208ENST00000548522 TMEM74BQ9NUR3 256 aa17.55■□□□□ 0.4
SSH1-208ENST00000548522 MBD1Q9UIS9 605 aaPredicted RBP17.55■□□□□ 0.4
SSH1-208ENST00000548522 LAMA5O15230 3695 aa17.55■□□□□ 0.4
SSH1-208ENST00000548522 PKD1L2Q7Z442 2459 aa17.55■□□□□ 0.4
SSH1-208ENST00000548522 PTPRDP23468 1912 aa17.55■□□□□ 0.4
SSH1-208ENST00000548522 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.54■□□□□ 0.4
SSH1-208ENST00000548522 ZNF233A6NK53 670 aa17.54■□□□□ 0.4
SSH1-208ENST00000548522 TRIM66O15016 1216 aa17.54■□□□□ 0.4
SSH1-208ENST00000548522 KAT7O95251 611 aa17.54■□□□□ 0.4
SSH1-208ENST00000548522 CST3P01034 146 aaPredicted RBP17.54■□□□□ 0.4
SSH1-208ENST00000548522 DLATP10515 647 aaKnown RBP17.54■□□□□ 0.4
SSH1-208ENST00000548522 P2RY2P41231 377 aa17.54■□□□□ 0.4
SSH1-208ENST00000548522 KIR2DL1P43626 348 aaPredicted RBP17.54■□□□□ 0.4
SSH1-208ENST00000548522 NOP14P78316 857 aaKnown RBP17.54■□□□□ 0.4
SSH1-208ENST00000548522 MAPRE1Q15691 268 aaKnown RBP17.54■□□□□ 0.4
SSH1-208ENST00000548522 KIAA1211LQ6NV74 962 aa17.54■□□□□ 0.4
SSH1-208ENST00000548522 C11orf74Q86VG3 221 aa17.54■□□□□ 0.4
SSH1-208ENST00000548522 WDR49Q8IV35 697 aa17.54■□□□□ 0.4
SSH1-208ENST00000548522 TMEFF1Q8IYR6 380 aa17.54■□□□□ 0.4
SSH1-208ENST00000548522 ZFRQ96KR1 1074 aaKnown RBP17.54■□□□□ 0.4
SSH1-208ENST00000548522 C8orf48Q96LL4 319 aa17.54■□□□□ 0.4
SSH1-208ENST00000548522 GZF1Q9H116 711 aaPredicted RBP17.54■□□□□ 0.4
SSH1-208ENST00000548522 FSCN3Q9NQT6 498 aa17.54■□□□□ 0.4
SSH1-208ENST00000548522 ZMIZ1Q9ULJ6 1067 aa17.54■□□□□ 0.4
SSH1-208ENST00000548522 R3HCC1Q9Y3T6 440 aaKnown RBP17.54■□□□□ 0.4
SSH1-208ENST00000548522 NUP205Q92621 2012 aa17.54■□□□□ 0.4
SSH1-208ENST00000548522 PFKLP17858 780 aa17.53■□□□□ 0.4
SSH1-208ENST00000548522 MAPK8P45983 427 aa17.53■□□□□ 0.4
SSH1-208ENST00000548522 MRPS21P82921 87 aaKnown RBP17.53■□□□□ 0.4
SSH1-208ENST00000548522 CUL4AQ13619 759 aa17.53■□□□□ 0.4
SSH1-208ENST00000548522 TRIM61Q5EBN2 209 aa17.53■□□□□ 0.4
SSH1-208ENST00000548522 CCDC65Q8IXS2 484 aa17.53■□□□□ 0.4
SSH1-208ENST00000548522 PHTF2Q8N3S3 785 aa17.53■□□□□ 0.4
SSH1-208ENST00000548522 RDH13Q8NBN7 331 aa17.53■□□□□ 0.4
SSH1-208ENST00000548522 OR6B3Q8NGW1 331 aa17.53■□□□□ 0.4
SSH1-208ENST00000548522 CCDC26Q8TAB7 109 aa17.53■□□□□ 0.4
SSH1-208ENST00000548522 HMGB4Q8WW32 186 aa17.53■□□□□ 0.4
SSH1-208ENST00000548522 ELMO3Q96BJ8 720 aa17.53■□□□□ 0.4
SSH1-208ENST00000548522 CCDC127Q96BQ5 260 aa17.53■□□□□ 0.4
SSH1-208ENST00000548522 CEP295NLQ96MC4 621 aa17.53■□□□□ 0.4
SSH1-208ENST00000548522 PNKPQ96T60 521 aa17.53■□□□□ 0.4
SSH1-208ENST00000548522 ADAM33Q9BZ11 813 aa17.53■□□□□ 0.4
SSH1-208ENST00000548522 SNX25Q9H3E2 840 aa17.53■□□□□ 0.4
SSH1-208ENST00000548522 ARHGEF4Q9NR80 690 aa17.53■□□□□ 0.4
SSH1-208ENST00000548522 DMXL2Q8TDJ6 3036 aa17.53■□□□□ 0.4
SSH1-208ENST00000548522 CACNA1EQ15878 2313 aa17.53■□□□□ 0.4
SSH1-208ENST00000548522 ATRXP46100 2492 aa17.53■□□□□ 0.4
SSH1-208ENST00000548522 TCRBV21S2A2A0A5A6 115 aa17.52■□□□□ 0.4
SSH1-208ENST00000548522 TGFB1I1O43294 461 aa17.52■□□□□ 0.4
SSH1-208ENST00000548522 MBL2P11226 248 aaPredicted RBP17.52■□□□□ 0.4
SSH1-208ENST00000548522 ADH5P11766 374 aa17.52■□□□□ 0.4
SSH1-208ENST00000548522 PTPN1P18031 435 aaKnown RBP17.52■□□□□ 0.4
SSH1-208ENST00000548522 CSRP1P21291 193 aaKnown RBP17.52■□□□□ 0.4
SSH1-208ENST00000548522 SYT1P21579 422 aa17.52■□□□□ 0.4
SSH1-208ENST00000548522 GNL1P36915 607 aaPredicted RBP17.52■□□□□ 0.4
SSH1-208ENST00000548522 SNRNP35Q16560 246 aaKnown RBP17.52■□□□□ 0.4
SSH1-208ENST00000548522 MAP7D1Q3KQU3 841 aa17.52■□□□□ 0.4
SSH1-208ENST00000548522 LY6G5CQ5SRR4 150 aa17.52■□□□□ 0.4
SSH1-208ENST00000548522 WHAMMQ8TF30 809 aa17.52■□□□□ 0.4
SSH1-208ENST00000548522 WBP2Q969T9 261 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms