RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 KRT222Q8N1A0 295 aa14.09□□□□□ -0.15
PTCH1-215ENST00000547672 SCML4Q8N228 414 aa14.09□□□□□ -0.15
PTCH1-215ENST00000547672 TMEM130Q8N3G9 435 aa14.09□□□□□ -0.15
PTCH1-215ENST00000547672 JOSD2Q8TAC2 188 aa14.09□□□□□ -0.15
PTCH1-215ENST00000547672 AENQ8WTP8 325 aaKnown RBP14.09□□□□□ -0.15
PTCH1-215ENST00000547672 HDAC7Q8WUI4 952 aa14.09□□□□□ -0.15
PTCH1-215ENST00000547672 IRGQQ8WZA9 623 aa14.09□□□□□ -0.15
PTCH1-215ENST00000547672 SLITRK1Q96PX8 696 aa14.09□□□□□ -0.15
PTCH1-215ENST00000547672 TMEM175Q9BSA9 504 aa14.09□□□□□ -0.15
PTCH1-215ENST00000547672 HIPK3Q9H422 1215 aa14.09□□□□□ -0.15
PTCH1-215ENST00000547672 CNGB3Q9NQW8 809 aa14.09□□□□□ -0.15
PTCH1-215ENST00000547672 MTRF1LQ9UGC7 380 aaKnown RBP14.09□□□□□ -0.15
PTCH1-215ENST00000547672 STAP1Q9ULZ2 295 aa14.09□□□□□ -0.15
PTCH1-215ENST00000547672 TDRD15B5MCY1 1934 aaKnown RBP14.09□□□□□ -0.15
PTCH1-215ENST00000547672 PAPSS1O43252 624 aaPredicted RBP14.08□□□□□ -0.16
PTCH1-215ENST00000547672 PQBP1O60828 265 aaKnown RBP14.08□□□□□ -0.16
PTCH1-215ENST00000547672 EFCAB14O75071 495 aa14.08□□□□□ -0.16
PTCH1-215ENST00000547672 AP1G2O75843 785 aa14.08□□□□□ -0.16
PTCH1-215ENST00000547672 CXCL10P02778 98 aa14.08□□□□□ -0.16
PTCH1-215ENST00000547672 LCP1P13796 627 aa14.08□□□□□ -0.16
PTCH1-215ENST00000547672 ZFXP17010 805 aaPredicted RBP14.08□□□□□ -0.16
PTCH1-215ENST00000547672 MIPP30301 263 aa14.08□□□□□ -0.16
PTCH1-215ENST00000547672 NOS2P35228 1153 aa14.08□□□□□ -0.16
PTCH1-215ENST00000547672 YWHAZP63104 245 aaKnown RBP14.08□□□□□ -0.16
PTCH1-215ENST00000547672 OGDHQ02218 1023 aa14.08□□□□□ -0.16
PTCH1-215ENST00000547672 YWHAHQ04917 246 aaPredicted RBP14.08□□□□□ -0.16
PTCH1-215ENST00000547672 ZNF252P-AS1Q0IIN9 211 aa14.08□□□□□ -0.16
PTCH1-215ENST00000547672 CALCOCO2Q13137 446 aa14.08□□□□□ -0.16
PTCH1-215ENST00000547672 MTMR3Q13615 1198 aa14.08□□□□□ -0.16
PTCH1-215ENST00000547672 IKBKEQ14164 716 aa14.08□□□□□ -0.16
PTCH1-215ENST00000547672 CASP8Q14790 479 aa14.08□□□□□ -0.16
PTCH1-215ENST00000547672 NFE2Q16621 373 aaPredicted RBP14.08□□□□□ -0.16
PTCH1-215ENST00000547672 INTS6LQ5JSJ4 861 aaKnown RBP14.08□□□□□ -0.16
PTCH1-215ENST00000547672 SPDYCQ5MJ68 293 aa14.08□□□□□ -0.16
PTCH1-215ENST00000547672 FAM171BQ6P995 826 aa14.08□□□□□ -0.16
PTCH1-215ENST00000547672 STRADAQ7RTN6 431 aa14.08□□□□□ -0.16
PTCH1-215ENST00000547672 ADAT2Q7Z6V5 191 aaKnown RBP14.08□□□□□ -0.16
PTCH1-215ENST00000547672 PIGZQ86VD9 579 aa14.08□□□□□ -0.16
PTCH1-215ENST00000547672 JAMLQ86YT9 394 aa14.08□□□□□ -0.16
PTCH1-215ENST00000547672 NPAS4Q8IUM7 802 aa14.08□□□□□ -0.16
PTCH1-215ENST00000547672 CCDC89Q8N998 374 aa14.08□□□□□ -0.16
PTCH1-215ENST00000547672 DBF4BQ8NFT6 615 aa14.08□□□□□ -0.16
PTCH1-215ENST00000547672 RNF25Q96BH1 459 aaPredicted RBP14.08□□□□□ -0.16
PTCH1-215ENST00000547672 DDX23Q9BUQ8 820 aaKnown RBP14.08□□□□□ -0.16
PTCH1-215ENST00000547672 B3GNT5Q9BYG0 378 aa14.08□□□□□ -0.16
PTCH1-215ENST00000547672 ZNF446Q9NWS9 450 aa14.08□□□□□ -0.16
PTCH1-215ENST00000547672 BHMG1C9JSJ3 638 aaPredicted RBP14.07□□□□□ -0.16
PTCH1-215ENST00000547672 TTI1O43156 1089 aa14.07□□□□□ -0.16
PTCH1-215ENST00000547672 NBNO60934 754 aa14.07□□□□□ -0.16
PTCH1-215ENST00000547672 ZMYND10O75800 440 aa14.07□□□□□ -0.16
PTCH1-215ENST00000547672 OAZ2O95190 189 aa14.07□□□□□ -0.16
PTCH1-215ENST00000547672 GJB6O95452 261 aa14.07□□□□□ -0.16
PTCH1-215ENST00000547672 F9P00740 461 aa14.07□□□□□ -0.16
PTCH1-215ENST00000547672 ITIH2P19823 946 aa14.07□□□□□ -0.16
PTCH1-215ENST00000547672 IBSPP21815 317 aaPredicted RBP14.07□□□□□ -0.16
PTCH1-215ENST00000547672 KDELR1P24390 212 aa14.07□□□□□ -0.16
PTCH1-215ENST00000547672 GJC1P36383 396 aa14.07□□□□□ -0.16
PTCH1-215ENST00000547672 MATKP42679 507 aa14.07□□□□□ -0.16
PTCH1-215ENST00000547672 OR1G1P47890 313 aa14.07□□□□□ -0.16
PTCH1-215ENST00000547672 AFF1P51825 1210 aaKnown RBP14.07□□□□□ -0.16
PTCH1-215ENST00000547672 AIF1P55008 147 aa14.07□□□□□ -0.16
PTCH1-215ENST00000547672 MRPS5P82675 430 aaKnown RBP14.07□□□□□ -0.16
PTCH1-215ENST00000547672 SLC25A11Q02978 314 aaKnown RBP14.07□□□□□ -0.16
PTCH1-215ENST00000547672 KLF1Q13351 362 aaPredicted RBP14.07□□□□□ -0.16
PTCH1-215ENST00000547672 MTFR1Q15390 333 aa14.07□□□□□ -0.16
PTCH1-215ENST00000547672 CFAP58Q5T655 872 aa14.07□□□□□ -0.16
PTCH1-215ENST00000547672 DUPD1Q68J44 220 aa14.07□□□□□ -0.16
PTCH1-215ENST00000547672 ZNF365Q70YC5 407 aa14.07□□□□□ -0.16
PTCH1-215ENST00000547672 COLGALT2Q8IYK4 626 aa14.07□□□□□ -0.16
PTCH1-215ENST00000547672 MREGQ8N565 214 aa14.07□□□□□ -0.16
PTCH1-215ENST00000547672 EMC1Q8N766 993 aa14.07□□□□□ -0.16
PTCH1-215ENST00000547672 CENPIQ92674 756 aaPredicted RBP14.07□□□□□ -0.16
PTCH1-215ENST00000547672 OSBPL7Q9BZF2 842 aa14.07□□□□□ -0.16
PTCH1-215ENST00000547672 DCLK3Q9C098 648 aa14.07□□□□□ -0.16
PTCH1-215ENST00000547672 ZWILCHQ9H900 591 aa14.07□□□□□ -0.16
PTCH1-215ENST00000547672 CSNK1G1Q9HCP0 422 aa14.07□□□□□ -0.16
PTCH1-215ENST00000547672 MED4Q9NPJ6 270 aa14.07□□□□□ -0.16
PTCH1-215ENST00000547672 TBC1D13Q9NVG8 400 aa14.07□□□□□ -0.16
PTCH1-215ENST00000547672 FAN1Q9Y2M0 1017 aa14.07□□□□□ -0.16
PTCH1-215ENST00000547672 NME7Q9Y5B8 376 aa14.07□□□□□ -0.16
PTCH1-215ENST00000547672 OR6C75A6NL08 312 aa14.06□□□□□ -0.16
PTCH1-215ENST00000547672 H7C4K7 107 aa14.06□□□□□ -0.16
PTCH1-215ENST00000547672 MDM4O15151 490 aa14.06□□□□□ -0.16
PTCH1-215ENST00000547672 OPA1O60313 960 aa14.06□□□□□ -0.16
PTCH1-215ENST00000547672 ATP2C2O75185 946 aa14.06□□□□□ -0.16
PTCH1-215ENST00000547672 SEC31AO94979 1220 aaKnown RBP14.06□□□□□ -0.16
PTCH1-215ENST00000547672 ACAT1P24752 427 aaKnown RBP14.06□□□□□ -0.16
PTCH1-215ENST00000547672 CDKN2BP42772 138 aa14.06□□□□□ -0.16
PTCH1-215ENST00000547672 PTGIRP43119 386 aa14.06□□□□□ -0.16
PTCH1-215ENST00000547672 CARSP49589 748 aaKnown RBP14.06□□□□□ -0.16
PTCH1-215ENST00000547672 ZNF135P52742 658 aaPredicted RBP14.06□□□□□ -0.16
PTCH1-215ENST00000547672 KRT81Q14533 505 aa14.06□□□□□ -0.16
PTCH1-215ENST00000547672 SIX1Q15475 284 aaPredicted RBP14.06□□□□□ -0.16
PTCH1-215ENST00000547672 TAZQ16635 292 aa14.06□□□□□ -0.16
PTCH1-215ENST00000547672 SLC25A52Q3SY17 297 aa14.06□□□□□ -0.16
PTCH1-215ENST00000547672 CCDC14Q49A88 953 aa14.06□□□□□ -0.16
PTCH1-215ENST00000547672 CLLU1OSQ5K130 101 aa14.06□□□□□ -0.16
PTCH1-215ENST00000547672 ERMARDQ5T6L9 678 aa14.06□□□□□ -0.16
PTCH1-215ENST00000547672 MFSD7Q6UXD7 560 aa14.06□□□□□ -0.16
PTCH1-215ENST00000547672 CLEC20AQ6ZU45 233 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms