RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 SLC23A1Q9UHI7 598 aa9.62□□□□□ -0.87
MRPS35-204ENST00000542199 DDTLA6NHG4 134 aaPredicted RBP9.61□□□□□ -0.87
MRPS35-204ENST00000542199 CXCL11O14625 94 aa9.61□□□□□ -0.87
MRPS35-204ENST00000542199 MAP4K4O95819 1239 aaPredicted RBP9.61□□□□□ -0.87
MRPS35-204ENST00000542199 UQCRFS1P1P0C7P4 283 aa9.61□□□□□ -0.87
MRPS35-204ENST00000542199 MALP21145 153 aa9.61□□□□□ -0.87
MRPS35-204ENST00000542199 CTXN1P60606 82 aa9.61□□□□□ -0.87
MRPS35-204ENST00000542199 GSTO1P78417 241 aa9.61□□□□□ -0.87
MRPS35-204ENST00000542199 CCDC157Q569K6 752 aa9.61□□□□□ -0.87
MRPS35-204ENST00000542199 THEMIS2Q5TEJ8 643 aa9.61□□□□□ -0.87
MRPS35-204ENST00000542199 HEATR3Q7Z4Q2 680 aa9.61□□□□□ -0.87
MRPS35-204ENST00000542199 ANKRD23Q86SG2 305 aa9.61□□□□□ -0.87
MRPS35-204ENST00000542199 CIR1Q86X95 450 aaPredicted RBP9.61□□□□□ -0.87
MRPS35-204ENST00000542199 ITPRIPQ8IWB1 547 aa9.61□□□□□ -0.87
MRPS35-204ENST00000542199 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.61□□□□□ -0.87
MRPS35-204ENST00000542199 MRI1Q9BV20 369 aa9.61□□□□□ -0.87
MRPS35-204ENST00000542199 ARMT1Q9H993 441 aa9.61□□□□□ -0.87
MRPS35-204ENST00000542199 SLC30A1Q9Y6M5 507 aa9.61□□□□□ -0.87
MRPS35-204ENST00000542199 FPGT-TNNI3KV9GXZ4 949 aa9.61□□□□□ -0.87
MRPS35-204ENST00000542199 LAMA3Q16787 3333 aa9.61□□□□□ -0.87
MRPS35-204ENST00000542199 ADGRA2Q96PE1 1338 aa9.6□□□□□ -0.87
MRPS35-204ENST00000542199 SLC16A6O15403 523 aa9.6□□□□□ -0.87
MRPS35-204ENST00000542199 SURF6O75683 361 aaKnown RBP9.6□□□□□ -0.87
MRPS35-204ENST00000542199 LDHCP07864 332 aa9.6□□□□□ -0.87
MRPS35-204ENST00000542199 SBK3P0C264 359 aa9.6□□□□□ -0.87
MRPS35-204ENST00000542199 HOXA5P20719 270 aa9.6□□□□□ -0.87
MRPS35-204ENST00000542199 PICALMQ13492 652 aa9.6□□□□□ -0.87
MRPS35-204ENST00000542199 ARHGEF6Q15052 776 aa9.6□□□□□ -0.87
MRPS35-204ENST00000542199 CSRP2Q16527 193 aa9.6□□□□□ -0.87
MRPS35-204ENST00000542199 C17orf99Q6UX52 265 aa9.6□□□□□ -0.87
MRPS35-204ENST00000542199 NPNTQ6UXI9 565 aa9.6□□□□□ -0.87
MRPS35-204ENST00000542199 PLXDC1Q8IUK5 500 aa9.6□□□□□ -0.87
MRPS35-204ENST00000542199 ELOA2Q8IYF1 753 aaPredicted RBP9.6□□□□□ -0.87
MRPS35-204ENST00000542199 SCYL3Q8IZE3 742 aa9.6□□□□□ -0.87
MRPS35-204ENST00000542199 SH2D3CQ8N5H7 860 aa9.6□□□□□ -0.87
MRPS35-204ENST00000542199 BORCS6Q96GS4 357 aa9.6□□□□□ -0.87
MRPS35-204ENST00000542199 LMBRD1Q9NUN5 540 aa9.6□□□□□ -0.87
MRPS35-204ENST00000542199 RAI14Q9P0K7 980 aa9.6□□□□□ -0.87
MRPS35-204ENST00000542199 CALCOCO1Q9P1Z2 691 aa9.6□□□□□ -0.87
MRPS35-204ENST00000542199 COL2A1P02458 1487 aaPredicted RBP9.59□□□□□ -0.87
MRPS35-204ENST00000542199 SZT2Q5T011 3432 aa9.59□□□□□ -0.87
MRPS35-204ENST00000542199 MYH2Q9UKX2 1941 aa9.59□□□□□ -0.87
MRPS35-204ENST00000542199 PDHXO00330 501 aa9.59□□□□□ -0.87
MRPS35-204ENST00000542199 TPP1O14773 563 aa9.59□□□□□ -0.87
MRPS35-204ENST00000542199 CD1AP06126 327 aa9.59□□□□□ -0.87
MRPS35-204ENST00000542199 RAP2BP61225 183 aa9.59□□□□□ -0.87
MRPS35-204ENST00000542199 OS9Q13438 667 aaPredicted RBP9.59□□□□□ -0.87
MRPS35-204ENST00000542199 SWSAP1Q6NVH7 229 aa9.59□□□□□ -0.87
MRPS35-204ENST00000542199 CEP85Q6P2H3 762 aa9.59□□□□□ -0.87
MRPS35-204ENST00000542199 GLB1LQ6UWU2 654 aa9.59□□□□□ -0.87
MRPS35-204ENST00000542199 CHST15Q7LFX5 561 aaPredicted RBP9.59□□□□□ -0.87
MRPS35-204ENST00000542199 PRRT2Q7Z6L0 340 aaPredicted RBP9.59□□□□□ -0.87
MRPS35-204ENST00000542199 RNF169Q8NCN4 708 aa9.59□□□□□ -0.87
MRPS35-204ENST00000542199 ZNF333Q96JL9 665 aa9.59□□□□□ -0.87
MRPS35-204ENST00000542199 NT5C1BQ96P26 610 aa9.59□□□□□ -0.87
MRPS35-204ENST00000542199 CPEB1Q9BZB8 566 aaKnown RBP9.59□□□□□ -0.87
MRPS35-204ENST00000542199 ARHGAP39Q9C0H5 1083 aa9.59□□□□□ -0.87
MRPS35-204ENST00000542199 C11orf54Q9H0W9 315 aaPredicted RBP9.59□□□□□ -0.87
MRPS35-204ENST00000542199 OSBPL5Q9H0X9 879 aaPredicted RBP9.59□□□□□ -0.87
MRPS35-204ENST00000542199 STAP2Q9UGK3 403 aa9.59□□□□□ -0.87
MRPS35-204ENST00000542199 DBNLQ9UJU6 430 aaKnown RBP9.59□□□□□ -0.87
MRPS35-204ENST00000542199 POLHQ9Y253 713 aa9.59□□□□□ -0.87
MRPS35-204ENST00000542199 AFG3L2Q9Y4W6 797 aa9.59□□□□□ -0.87
MRPS35-204ENST00000542199 ZHX2Q9Y6X8 837 aa9.59□□□□□ -0.87
MRPS35-204ENST00000542199 NT5C1B-RDH14C9J2C7 533 aa9.58□□□□□ -0.88
MRPS35-204ENST00000542199 ATP5JP18859 108 aa9.58□□□□□ -0.88
MRPS35-204ENST00000542199 RAB1AP62820 205 aa9.58□□□□□ -0.88
MRPS35-204ENST00000542199 NKX6-1P78426 367 aaPredicted RBP9.58□□□□□ -0.88
MRPS35-204ENST00000542199 ELAVL1Q15717 326 aaKnown RBP9.58□□□□□ -0.88
MRPS35-204ENST00000542199 CCDC158Q5M9N0 1113 aa9.58□□□□□ -0.88
MRPS35-204ENST00000542199 TTC39AQ5SRH9 613 aa9.58□□□□□ -0.88
MRPS35-204ENST00000542199 D2HGDHQ8N465 521 aa9.58□□□□□ -0.88
MRPS35-204ENST00000542199 MB21D1Q8N884 522 aa9.58□□□□□ -0.88
MRPS35-204ENST00000542199 FAM156AQ8NDB6 213 aa9.58□□□□□ -0.88
MRPS35-204ENST00000542199 CDK5RAP3Q96JB5 506 aa9.58□□□□□ -0.88
MRPS35-204ENST00000542199 PARK7Q99497 189 aaKnown RBP9.58□□□□□ -0.88
MRPS35-204ENST00000542199 TMEM60Q9H2L4 133 aa9.58□□□□□ -0.88
MRPS35-204ENST00000542199 TCRBV7S2A1N4TA0A589 114 aa9.57□□□□□ -0.88
MRPS35-204ENST00000542199 B5MCH6 92 aa9.57□□□□□ -0.88
MRPS35-204ENST00000542199 FAM227AF5H4B4 570 aa9.57□□□□□ -0.88
MRPS35-204ENST00000542199 H3BUI4 141 aa9.57□□□□□ -0.88
MRPS35-204ENST00000542199 CAND2O75155 1236 aa9.57□□□□□ -0.88
MRPS35-204ENST00000542199 TYRP14679 529 aa9.57□□□□□ -0.88
MRPS35-204ENST00000542199 CTGFP29279 349 aa9.57□□□□□ -0.88
MRPS35-204ENST00000542199 IL12RB1P42701 662 aa9.57□□□□□ -0.88
MRPS35-204ENST00000542199 AGFG1P52594 562 aaKnown RBP9.57□□□□□ -0.88
MRPS35-204ENST00000542199 KIF22Q14807 665 aa9.57□□□□□ -0.88
MRPS35-204ENST00000542199 NAA16Q6N069 864 aaPredicted RBP9.57□□□□□ -0.88
MRPS35-204ENST00000542199 SEM1Q6ZVN7 128 aa9.57□□□□□ -0.88
MRPS35-204ENST00000542199 FASTKD5Q7L8L6 764 aaKnown RBP9.57□□□□□ -0.88
MRPS35-204ENST00000542199 ADGRA1Q86SQ6 560 aa9.57□□□□□ -0.88
MRPS35-204ENST00000542199 DAAM2Q86T65 1068 aa9.57□□□□□ -0.88
MRPS35-204ENST00000542199 TEX11Q8IYF3 940 aa9.57□□□□□ -0.88
MRPS35-204ENST00000542199 KIAA0319LQ8IZA0 1049 aa9.57□□□□□ -0.88
MRPS35-204ENST00000542199 SH3RF3Q8TEJ3 882 aaPredicted RBP9.57□□□□□ -0.88
MRPS35-204ENST00000542199 SLC35A4Q96G79 324 aa9.57□□□□□ -0.88
MRPS35-204ENST00000542199 RBM15Q96T37 977 aaKnown RBP eCLIP9.57□□□□□ -0.88
MRPS35-204ENST00000542199 KRTAP4-12Q9BQ66 201 aa9.57□□□□□ -0.88
MRPS35-204ENST00000542199 CPPED1Q9BRF8 314 aaPredicted RBP9.57□□□□□ -0.88
MRPS35-204ENST00000542199 FAM204AQ9H8W3 233 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms