RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 PDCLQ13371 301 aa29.28■■■□□ 2.28
CCM2-218ENST00000541586 ADGRE1Q14246 886 aa29.28■■■□□ 2.28
CCM2-218ENST00000541586 CYP4A22Q5TCH4 519 aa29.28■■■□□ 2.28
CCM2-218ENST00000541586 TTC30AQ86WT1 665 aa29.28■■■□□ 2.28
CCM2-218ENST00000541586 MNS1Q8NEH6 495 aa29.28■■■□□ 2.28
CCM2-218ENST00000541586 KLHL5Q96PQ7 755 aa29.28■■■□□ 2.28
CCM2-218ENST00000541586 TRIM7Q9C029 511 aa29.28■■■□□ 2.28
CCM2-218ENST00000541586 TJP2Q9UDY2 1190 aa29.28■■■□□ 2.28
CCM2-218ENST00000541586 BACE2Q9Y5Z0 518 aa29.28■■■□□ 2.28
CCM2-218ENST00000541586 IRAK3Q9Y616 596 aa29.28■■■□□ 2.28
CCM2-218ENST00000541586 ATP2C2O75185 946 aa29.27■■■□□ 2.28
CCM2-218ENST00000541586 CCDC130P13994 396 aa29.27■■■□□ 2.28
CCM2-218ENST00000541586 PCSK1P29120 753 aa29.27■■■□□ 2.28
CCM2-218ENST00000541586 ADGRD2Q7Z7M1 963 aa29.27■■■□□ 2.28
CCM2-218ENST00000541586 HES6Q96HZ4 224 aa29.27■■■□□ 2.28
CCM2-218ENST00000541586 CAPZA3Q96KX2 299 aa29.27■■■□□ 2.28
CCM2-218ENST00000541586 ACBD6Q9BR61 282 aa29.27■■■□□ 2.28
CCM2-218ENST00000541586 HESX1Q9UBX0 185 aa29.27■■■□□ 2.28
CCM2-218ENST00000541586 STRIP2Q9ULQ0 834 aa29.27■■■□□ 2.28
CCM2-218ENST00000541586 TCRBV5S1A1TA0A578 114 aa29.26■■■□□ 2.27
CCM2-218ENST00000541586 TBC1D4O60343 1298 aa29.26■■■□□ 2.27
CCM2-218ENST00000541586 CPB1P15086 417 aa29.26■■■□□ 2.27
CCM2-218ENST00000541586 MSANTD4Q8NCY6 345 aa29.26■■■□□ 2.27
CCM2-218ENST00000541586 SPATA18Q8TC71 538 aa29.26■■■□□ 2.27
CCM2-218ENST00000541586 RXFP1Q9HBX9 757 aa29.26■■■□□ 2.27
CCM2-218ENST00000541586 FNIP2Q9P278 1114 aa29.26■■■□□ 2.27
CCM2-218ENST00000541586 OR6C75A6NL08 312 aa29.25■■■□□ 2.27
CCM2-218ENST00000541586 GJB6O95452 261 aa29.25■■■□□ 2.27
CCM2-218ENST00000541586 PTPN1P18031 435 aaKnown RBP29.25■■■□□ 2.27
CCM2-218ENST00000541586 TSPY1Q01534 308 aa29.25■■■□□ 2.27
CCM2-218ENST00000541586 CREMQ03060 361 aa29.25■■■□□ 2.27
CCM2-218ENST00000541586 GPR65Q8IYL9 337 aa29.25■■■□□ 2.27
CCM2-218ENST00000541586 MICALL1Q8N3F8 863 aa29.25■■■□□ 2.27
CCM2-218ENST00000541586 CEP112Q8N8E3 955 aa29.25■■■□□ 2.27
CCM2-218ENST00000541586 C18orf8Q96DM3 657 aa29.25■■■□□ 2.27
CCM2-218ENST00000541586 SYT15Q9BQS2 421 aa29.25■■■□□ 2.27
CCM2-218ENST00000541586 TLE6Q9H808 572 aa29.25■■■□□ 2.27
CCM2-218ENST00000541586 COL4A4P53420 1690 aaPredicted RBP29.25■■■□□ 2.27
CCM2-218ENST00000541586 ERBB2P04626 1255 aa29.25■■■□□ 2.27
CCM2-218ENST00000541586 COMTP21964 271 aa29.25■■■□□ 2.27
CCM2-218ENST00000541586 ADORA2BP29275 332 aa29.25■■■□□ 2.27
CCM2-218ENST00000541586 GABRB2P47870 512 aa29.25■■■□□ 2.27
CCM2-218ENST00000541586 DNAJC24Q6P3W2 148 aa29.25■■■□□ 2.27
CCM2-218ENST00000541586 LRRTM3Q86VH5 581 aa29.25■■■□□ 2.27
CCM2-218ENST00000541586 CREG2Q8IUH2 290 aa29.25■■■□□ 2.27
CCM2-218ENST00000541586 C3orf20Q8ND61 904 aa29.25■■■□□ 2.27
CCM2-218ENST00000541586 SLC2A14Q8TDB8 520 aa29.25■■■□□ 2.27
CCM2-218ENST00000541586 MYLIPQ8WY64 445 aa29.25■■■□□ 2.27
CCM2-218ENST00000541586 PGLYRP2Q96PD5 576 aa29.25■■■□□ 2.27
CCM2-218ENST00000541586 IGFLR1Q9H665 355 aa29.25■■■□□ 2.27
CCM2-218ENST00000541586 SYNCQ9H7C4 482 aa29.25■■■□□ 2.27
CCM2-218ENST00000541586 CDH9Q9ULB4 789 aa29.25■■■□□ 2.27
CCM2-218ENST00000541586 MTCH2Q9Y6C9 303 aa29.25■■■□□ 2.27
CCM2-218ENST00000541586 CTIFO43310 598 aaKnown RBP29.24■■■□□ 2.27
CCM2-218ENST00000541586 NDUFV1P49821 464 aa29.24■■■□□ 2.27
CCM2-218ENST00000541586 CCDC142Q17RM4 750 aa29.24■■■□□ 2.27
CCM2-218ENST00000541586 SLC39A12Q504Y0 691 aa29.24■■■□□ 2.27
CCM2-218ENST00000541586 SLC8B1Q6J4K2 584 aa29.24■■■□□ 2.27
CCM2-218ENST00000541586 ANKRD52Q8NB46 1076 aa29.24■■■□□ 2.27
CCM2-218ENST00000541586 FEZF2Q8TBJ5 459 aa29.24■■■□□ 2.27
CCM2-218ENST00000541586 CDX2Q99626 313 aaPredicted RBP29.24■■■□□ 2.27
CCM2-218ENST00000541586 OXCT2Q9BYC2 517 aaPredicted RBP29.24■■■□□ 2.27
CCM2-218ENST00000541586 MYBPHLA2RUH7 354 aa29.23■■■□□ 2.27
CCM2-218ENST00000541586 MYO1FO00160 1098 aa29.23■■■□□ 2.27
CCM2-218ENST00000541586 TULP2O00295 520 aa29.23■■■□□ 2.27
CCM2-218ENST00000541586 ADH1AP07327 375 aa29.23■■■□□ 2.27
CCM2-218ENST00000541586 SPATA31D3P0C874 917 aa29.23■■■□□ 2.27
CCM2-218ENST00000541586 SETSIPP0DME0 302 aa29.23■■■□□ 2.27
CCM2-218ENST00000541586 NRIP1P48552 1158 aa29.23■■■□□ 2.27
CCM2-218ENST00000541586 GSCP56915 257 aaPredicted RBP29.23■■■□□ 2.27
CCM2-218ENST00000541586 ROR1Q01973 937 aa29.23■■■□□ 2.27
CCM2-218ENST00000541586 SPATA31D4Q6ZUB0 917 aa29.23■■■□□ 2.27
CCM2-218ENST00000541586 XYLT1Q86Y38 959 aa29.23■■■□□ 2.27
CCM2-218ENST00000541586 SLC35F5Q8WV83 523 aa29.23■■■□□ 2.27
CCM2-218ENST00000541586 ZCWPW1Q9H0M4 648 aa29.23■■■□□ 2.27
CCM2-218ENST00000541586 ST7Q9NRC1 585 aa29.23■■■□□ 2.27
CCM2-218ENST00000541586 LMCD1Q9NZU5 365 aa29.23■■■□□ 2.27
CCM2-218ENST00000541586 TSC2P49815 1807 aa29.23■■■□□ 2.27
CCM2-218ENST00000541586 KCNK3O14649 394 aa29.23■■■□□ 2.27
CCM2-218ENST00000541586 RPL7AP62424 266 aaKnown RBP29.23■■■□□ 2.27
CCM2-218ENST00000541586 PDE4CQ08493 712 aa29.23■■■□□ 2.27
CCM2-218ENST00000541586 INTS6LQ5JSJ4 861 aaKnown RBP29.23■■■□□ 2.27
CCM2-218ENST00000541586 PPP1R15BQ5SWA1 713 aa29.23■■■□□ 2.27
CCM2-218ENST00000541586 CPNE8Q86YQ8 564 aa29.23■■■□□ 2.27
CCM2-218ENST00000541586 DCP1BQ8IZD4 617 aaKnown RBP29.23■■■□□ 2.27
CCM2-218ENST00000541586 HNRNPABQ99729 332 aaKnown RBP29.23■■■□□ 2.27
CCM2-218ENST00000541586 NSUN3Q9H649 340 aaKnown RBP29.23■■■□□ 2.27
CCM2-218ENST00000541586 CRTAC1Q9NQ79 661 aa29.23■■■□□ 2.27
CCM2-218ENST00000541586 WDR35Q9P2L0 1181 aa29.23■■■□□ 2.27
CCM2-218ENST00000541586 WDR27A2RRH5 827 aa29.22■■■□□ 2.27
CCM2-218ENST00000541586 DDX3YO15523 660 aaKnown RBP29.22■■■□□ 2.27
CCM2-218ENST00000541586 BCAT1P54687 386 aa29.22■■■□□ 2.27
CCM2-218ENST00000541586 BST2Q10589 180 aaKnown RBP29.22■■■□□ 2.27
CCM2-218ENST00000541586 ZNF268Q14587 947 aaPredicted RBP29.22■■■□□ 2.27
CCM2-218ENST00000541586 TCEAL5Q5H9L2 206 aa29.22■■■□□ 2.27
CCM2-218ENST00000541586 MDH1BQ5I0G3 518 aa29.22■■■□□ 2.27
CCM2-218ENST00000541586 PMF1Q6P1K2 205 aa29.22■■■□□ 2.27
CCM2-218ENST00000541586 FUKQ8N0W3 1084 aa29.22■■■□□ 2.27
CCM2-218ENST00000541586 IPO4Q8TEX9 1081 aaKnown RBP29.22■■■□□ 2.27
CCM2-218ENST00000541586 PPP2R3CQ969Q6 453 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms