RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 NFIL3Q16649 462 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 UPP1Q16831 310 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 GLRA4Q5JXX5 417 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 SNAP47Q5SQN1 464 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 ZBTB37Q5TC79 503 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 SPATA1Q5VX52 437 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 CENPPQ6IPU0 288 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 HID1Q8IV36 788 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 GPR65Q8IYL9 337 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 ADSSL1Q8N142 457 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 MRPL43Q8N983 215 aaKnown RBP6.41□□□□□ -1.38
DDB1-210ENST00000538129 MICAL1Q8TDZ2 1067 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 GDPD5Q8WTR4 605 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 CACTINQ8WUQ7 758 aaKnown RBP6.41□□□□□ -1.38
DDB1-210ENST00000538129 ISL2Q96A47 359 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 SAAL1Q96ER3 474 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 PLPPR2Q96GM1 343 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 DHTKD1Q96HY7 919 aaPredicted RBP6.41□□□□□ -1.38
DDB1-210ENST00000538129 WNT10AQ9GZT5 417 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 CLSTN2Q9H4D0 955 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 PCIF1Q9H4Z3 704 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 ZFP64Q9NPA5 681 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 TLR9Q9NR96 1032 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 RBAKQ9NYW8 714 aaPredicted RBP6.41□□□□□ -1.38
DDB1-210ENST00000538129 GGT7Q9UJ14 662 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 MAN1B1Q9UKM7 699 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 UBQLN1Q9UMX0 589 aaKnown RBP6.41□□□□□ -1.38
DDB1-210ENST00000538129 MAPK8IP1Q9UQF2 711 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 SSX2IPQ9Y2D8 614 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 C2CD2Q9Y426 696 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 IRAK3Q9Y616 596 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 PLXNA4Q9HCM2 1894 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 COL6A3P12111 3177 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 GOLGA8IPA6NC78 632 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 CASTOR2A6NHX0 329 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 GOLGA8JA6NMD2 632 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 PIRO00625 290 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 PSMA7O14818 248 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 CLIC2O15247 247 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 MAPK13O15264 365 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 EXOC3O60645 756 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 B3GAT3O94766 335 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 CXCL14O95715 111 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 MBD3O95983 291 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 C1RP00736 705 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 NR3C1P04150 777 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 SOD2P04179 222 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 CTSAP10619 480 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 FOSL1P15407 271 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 ATF4P18848 351 aaPredicted RBP6.4□□□□□ -1.38
DDB1-210ENST00000538129 MCM4P33991 863 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 PRCPP42785 496 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 CYP2J2P51589 502 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 CLCNKBP51801 687 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 ENPEPQ07075 957 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 SPAG1Q07617 926 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 ADAM9Q13443 819 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 CAMK2GQ13555 558 aaPredicted RBP6.4□□□□□ -1.38
DDB1-210ENST00000538129 SEPT6Q14141 434 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 SMC1AQ14683 1233 aaKnown RBP6.4□□□□□ -1.38
DDB1-210ENST00000538129 TMEM132DQ14C87 1099 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 EDRF1Q3B7T1 1238 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 USP41Q3LFD5 358 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 TIGD5Q53EQ6 642 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 EGFLAMQ63HQ2 1017 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 JADE1Q6IE81 842 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 SDE2Q6IQ49 451 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 FOXR2Q6PJQ5 311 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 CD300LGQ6UXG3 332 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 TMEM173Q86WV6 379 aaPredicted RBP6.4□□□□□ -1.38
DDB1-210ENST00000538129 CBWD2Q8IUF1 395 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 BRSK2Q8IWQ3 736 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 RNF168Q8IYW5 571 aaPredicted RBP6.4□□□□□ -1.38
DDB1-210ENST00000538129 VPS52Q8N1B4 723 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 MFSD2AQ8NA29 543 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 PHC3Q8NDX5 983 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 ZSWIM2Q8NEG5 633 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 BEST2Q8NFU1 509 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 GPT2Q8TD30 523 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 BCL7CQ8WUZ0 217 aaPredicted RBP6.4□□□□□ -1.38
DDB1-210ENST00000538129 ERCC4Q92889 916 aaPredicted RBP6.4□□□□□ -1.38
DDB1-210ENST00000538129 PPP2R3CQ969Q6 453 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 C18orf25Q96B23 403 aaPredicted RBP6.4□□□□□ -1.38
DDB1-210ENST00000538129 TCF25Q9BQ70 676 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 PAAF1Q9BRP4 392 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 NSUN3Q9H649 340 aaKnown RBP6.4□□□□□ -1.38
DDB1-210ENST00000538129 MRPL17Q9NRX2 175 aaKnown RBP6.4□□□□□ -1.38
DDB1-210ENST00000538129 CHST7Q9NS84 486 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 MARCH5Q9NX47 278 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 ADAM28Q9UKQ2 775 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 FRMD4BQ9Y2L6 1034 aa6.4□□□□□ -1.38
DDB1-210ENST00000538129 PRG3Q9Y2Y8 225 aaPredicted RBP6.4□□□□□ -1.38
DDB1-210ENST00000538129 NCOR1O75376 2440 aa6.39□□□□□ -1.39
DDB1-210ENST00000538129 SCN1AP35498 2009 aa6.39□□□□□ -1.39
DDB1-210ENST00000538129 ANO9A1A5B4 782 aa6.39□□□□□ -1.39
DDB1-210ENST00000538129 FSD2A1L4K1 749 aa6.39□□□□□ -1.39
DDB1-210ENST00000538129 C2orf71A6NGG8 1288 aa6.39□□□□□ -1.39
DDB1-210ENST00000538129 PODXLO00592 558 aa6.39□□□□□ -1.39
DDB1-210ENST00000538129 IKBKBO14920 756 aa6.39□□□□□ -1.39
DDB1-210ENST00000538129 CETN3O15182 167 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms