RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 CFAP52Q8N1V2 620 aa6.72□□□□□ -1.33
CLIP1-207ENST00000536634 SH2D3CQ8N5H7 860 aa6.72□□□□□ -1.33
CLIP1-207ENST00000536634 MAP3K14Q99558 947 aa6.72□□□□□ -1.33
CLIP1-207ENST00000536634 BRD9Q9H8M2 597 aa6.72□□□□□ -1.33
CLIP1-207ENST00000536634 LMBRD1Q9NUN5 540 aa6.72□□□□□ -1.33
CLIP1-207ENST00000536634 MRPS18AQ9NVS2 196 aaKnown RBP6.72□□□□□ -1.33
CLIP1-207ENST00000536634 ZIM2Q9NZV7 527 aa6.72□□□□□ -1.33
CLIP1-207ENST00000536634 TESQ9UGI8 421 aaKnown RBP6.72□□□□□ -1.33
CLIP1-207ENST00000536634 PACSIN3Q9UKS6 424 aa6.72□□□□□ -1.33
CLIP1-207ENST00000536634 UNC80Q8N2C7 3258 aa6.72□□□□□ -1.33
CLIP1-207ENST00000536634 CEP290O15078 2479 aa6.72□□□□□ -1.33
CLIP1-207ENST00000536634 HEG1Q9ULI3 1381 aa6.71□□□□□ -1.33
CLIP1-207ENST00000536634 CELF2O95319 508 aaKnown RBP6.71□□□□□ -1.34
CLIP1-207ENST00000536634 ARIH2O95376 493 aa6.71□□□□□ -1.34
CLIP1-207ENST00000536634 ALDH2P05091 517 aa6.71□□□□□ -1.34
CLIP1-207ENST00000536634 HKR1P10072 659 aa6.71□□□□□ -1.34
CLIP1-207ENST00000536634 TYRP14679 529 aa6.71□□□□□ -1.34
CLIP1-207ENST00000536634 TGM1P22735 817 aa6.71□□□□□ -1.34
CLIP1-207ENST00000536634 CYP2C19P33261 490 aa6.71□□□□□ -1.34
CLIP1-207ENST00000536634 IL6STP40189 918 aaPredicted RBP6.71□□□□□ -1.34
CLIP1-207ENST00000536634 PIK3CGP48736 1102 aa6.71□□□□□ -1.34
CLIP1-207ENST00000536634 SEC24CP53992 1094 aa6.71□□□□□ -1.34
CLIP1-207ENST00000536634 USP14P54578 494 aa6.71□□□□□ -1.34
CLIP1-207ENST00000536634 MC2RQ01718 297 aa6.71□□□□□ -1.34
CLIP1-207ENST00000536634 TAP1Q03518 808 aa6.71□□□□□ -1.34
CLIP1-207ENST00000536634 PPP1R3BQ86XI6 285 aa6.71□□□□□ -1.34
CLIP1-207ENST00000536634 SLC44A3Q8N4M1 653 aa6.71□□□□□ -1.34
CLIP1-207ENST00000536634 LRGUKQ96M69 825 aa6.71□□□□□ -1.34
CLIP1-207ENST00000536634 Q96MF0 132 aa6.71□□□□□ -1.34
CLIP1-207ENST00000536634 GLIS2Q9BZE0 524 aaPredicted RBP6.71□□□□□ -1.34
CLIP1-207ENST00000536634 MRPL46Q9H2W6 279 aaKnown RBP6.71□□□□□ -1.34
CLIP1-207ENST00000536634 PNMA8BQ9ULN7 279 aaPredicted RBP6.71□□□□□ -1.34
CLIP1-207ENST00000536634 NR2E3Q9Y5X4 410 aa6.71□□□□□ -1.34
CLIP1-207ENST00000536634 MYADML2A6NDP7 307 aa6.7□□□□□ -1.34
CLIP1-207ENST00000536634 ZNF785A8K8V0 405 aa6.7□□□□□ -1.34
CLIP1-207ENST00000536634 AP1G1O43747 822 aa6.7□□□□□ -1.34
CLIP1-207ENST00000536634 OFD1O75665 1012 aa6.7□□□□□ -1.34
CLIP1-207ENST00000536634 SUN1O94901 812 aa6.7□□□□□ -1.34
CLIP1-207ENST00000536634 MATN4O95460 622 aa6.7□□□□□ -1.34
CLIP1-207ENST00000536634 AHSGP02765 367 aa6.7□□□□□ -1.34
CLIP1-207ENST00000536634 GNAI3P08754 354 aa6.7□□□□□ -1.34
CLIP1-207ENST00000536634 HMOX1P09601 288 aa6.7□□□□□ -1.34
CLIP1-207ENST00000536634 FTH1P19P0C7X4 201 aa6.7□□□□□ -1.34
CLIP1-207ENST00000536634 KCNA2P16389 499 aa6.7□□□□□ -1.34
CLIP1-207ENST00000536634 FDXRP22570 491 aa6.7□□□□□ -1.34
CLIP1-207ENST00000536634 GNAI1P63096 354 aa6.7□□□□□ -1.34
CLIP1-207ENST00000536634 ZNF844Q08AG5 666 aa6.7□□□□□ -1.34
CLIP1-207ENST00000536634 MTHFSDQ2M296 383 aaKnown RBP6.7□□□□□ -1.34
CLIP1-207ENST00000536634 KRTAP15-1Q3LI76 137 aa6.7□□□□□ -1.34
CLIP1-207ENST00000536634 NBPF5PQ86XG9 351 aaPredicted RBP6.7□□□□□ -1.34
CLIP1-207ENST00000536634 PDSS2Q86YH6 399 aa6.7□□□□□ -1.34
CLIP1-207ENST00000536634 AOPEPQ8N6M6 819 aa6.7□□□□□ -1.34
CLIP1-207ENST00000536634 SUPT20HQ8NEM7 779 aa6.7□□□□□ -1.34
CLIP1-207ENST00000536634 DIS3LQ8TF46 1054 aaKnown RBP6.7□□□□□ -1.34
CLIP1-207ENST00000536634 TMEM125Q96AQ2 219 aa6.7□□□□□ -1.34
CLIP1-207ENST00000536634 COQ10AQ96MF6 247 aa6.7□□□□□ -1.34
CLIP1-207ENST00000536634 PSMD1Q99460 953 aa6.7□□□□□ -1.34
CLIP1-207ENST00000536634 TOR3AQ9H497 397 aa6.7□□□□□ -1.34
CLIP1-207ENST00000536634 SLITRK6Q9H5Y7 841 aa6.7□□□□□ -1.34
CLIP1-207ENST00000536634 WDCPQ9H6R7 721 aa6.7□□□□□ -1.34
CLIP1-207ENST00000536634 KMT5AQ9NQR1 393 aa6.7□□□□□ -1.34
CLIP1-207ENST00000536634 FEZ2Q9UHY8 353 aaPredicted RBP6.7□□□□□ -1.34
CLIP1-207ENST00000536634 AGAP1Q9UPQ3 857 aa6.7□□□□□ -1.34
CLIP1-207ENST00000536634 PCDHA1Q9Y5I3 950 aa6.7□□□□□ -1.34
CLIP1-207ENST00000536634 ABCC12Q96J65 1359 aa6.69□□□□□ -1.34
CLIP1-207ENST00000536634 CCDC195A0A1B0GUA6 201 aa6.69□□□□□ -1.34
CLIP1-207ENST00000536634 A0A1W2PS29 197 aa6.69□□□□□ -1.34
CLIP1-207ENST00000536634 KCNQ3O43525 872 aa6.69□□□□□ -1.34
CLIP1-207ENST00000536634 ANXA1P04083 346 aa6.69□□□□□ -1.34
CLIP1-207ENST00000536634 LPOP22079 712 aaPredicted RBP6.69□□□□□ -1.34
CLIP1-207ENST00000536634 AVPR1BP47901 424 aa6.69□□□□□ -1.34
CLIP1-207ENST00000536634 ZNF135P52742 658 aaPredicted RBP6.69□□□□□ -1.34
CLIP1-207ENST00000536634 NKX6-1P78426 367 aaPredicted RBP6.69□□□□□ -1.34
CLIP1-207ENST00000536634 PLS1Q14651 629 aa6.69□□□□□ -1.34
CLIP1-207ENST00000536634 LRRC41Q15345 812 aa6.69□□□□□ -1.34
CLIP1-207ENST00000536634 CRB2Q5IJ48 1285 aa6.69□□□□□ -1.34
CLIP1-207ENST00000536634 TAPT1Q6NXT6 567 aa6.69□□□□□ -1.34
CLIP1-207ENST00000536634 ZNF790Q6PG37 636 aa6.69□□□□□ -1.34
CLIP1-207ENST00000536634 B3GNT9Q6UX72 402 aa6.69□□□□□ -1.34
CLIP1-207ENST00000536634 DLK2Q6UY11 383 aa6.69□□□□□ -1.34
CLIP1-207ENST00000536634 USP50Q70EL3 339 aaPredicted RBP6.69□□□□□ -1.34
CLIP1-207ENST00000536634 TTC5Q8N0Z6 440 aa6.69□□□□□ -1.34
CLIP1-207ENST00000536634 SSH3Q8TE77 659 aa6.69□□□□□ -1.34
CLIP1-207ENST00000536634 JDP2Q8WYK2 163 aa6.69□□□□□ -1.34
CLIP1-207ENST00000536634 TNPO1Q92973 898 aaKnown RBP6.69□□□□□ -1.34
CLIP1-207ENST00000536634 SCAMP4Q969E2 229 aa6.69□□□□□ -1.34
CLIP1-207ENST00000536634 CAVIN3Q969G5 261 aa6.69□□□□□ -1.34
CLIP1-207ENST00000536634 PTCD3Q96EY7 689 aaKnown RBP6.69□□□□□ -1.34
CLIP1-207ENST00000536634 CGRRF1Q99675 332 aa6.69□□□□□ -1.34
CLIP1-207ENST00000536634 POLR3GLQ9BT43 218 aa6.69□□□□□ -1.34
CLIP1-207ENST00000536634 ANLNQ9NQW6 1124 aa6.69□□□□□ -1.34
CLIP1-207ENST00000536634 GNL3LQ9NVN8 582 aaKnown RBP6.69□□□□□ -1.34
CLIP1-207ENST00000536634 TBCCD1Q9NVR7 557 aa6.69□□□□□ -1.34
CLIP1-207ENST00000536634 PNPOQ9NVS9 261 aa6.69□□□□□ -1.34
CLIP1-207ENST00000536634 RLIMQ9NVW2 624 aa6.69□□□□□ -1.34
CLIP1-207ENST00000536634 CFAP97Q9P2B7 532 aa6.69□□□□□ -1.34
CLIP1-207ENST00000536634 SALL3Q9BXA9 1300 aa6.69□□□□□ -1.34
CLIP1-207ENST00000536634 TRIOBPQ9H2D6 2365 aa6.68□□□□□ -1.34
CLIP1-207ENST00000536634 TRGV11A0A075B6L2 103 aa6.68□□□□□ -1.34
CLIP1-207ENST00000536634 PRAMEF33A0A0G2JMD5 474 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms