RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 TDRD10Q5VZ19 366 aaKnown RBP9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 CWF19L1Q69YN2 538 aaKnown RBP9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 GAREM2Q75VX8 874 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 TMC8Q8IU68 726 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 FAM186BQ8IYM0 893 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 TTC8Q8TAM2 541 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 PARD3BQ8TEW8 1205 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 KBTBD7Q8WVZ9 684 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 ATOH1Q92858 354 aaPredicted RBP9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 SMARCE1Q969G3 411 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 MYLPFQ96A32 169 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 SYAP1Q96A49 352 aaPredicted RBP9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 ELSPBP1Q96BH3 223 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 ASB16Q96NS5 453 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 TRMT61BQ9BVS5 477 aaKnown RBP9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 LRRC3Q9BY71 257 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 FOXQ1Q9C009 403 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 SMG9Q9H0W8 520 aaKnown RBP9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 TRPC7Q9HCX4 862 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 AVENQ9NQS1 362 aaPredicted RBP9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 DMAC2Q9NW81 257 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 RMND1Q9NWS8 449 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 MAGEC2Q9UBF1 373 aaPredicted RBP9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 HOOK1Q9UJC3 728 aaKnown RBP9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 DOCK8Q8NF50 2099 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 SERTM1A2A2V5 107 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 HEPACAM2A8MVW5 462 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 KINO60870 393 aaKnown RBP9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 LRRN2O75325 713 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 MICAL2O94851 1124 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 FGF19O95750 216 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 WARSP23381 471 aaKnown RBP9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 FCARP24071 287 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 RPL13P26373 211 aaKnown RBP9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 ANXA13P27216 316 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 CTSOP43234 321 aaPredicted RBP9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 GCLMP48507 274 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 CLCN5P51795 746 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 VAMP7P51809 220 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 EPHA5P54756 1037 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 RPL10AP62906 217 aaKnown RBP9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 PFKPQ01813 784 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 ORC1Q13415 861 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 KCNB1Q14721 858 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 TEAD4Q15561 434 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 MLF2Q15773 248 aaPredicted RBP9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 ZNF667Q5HYK9 610 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 TMEM214Q6NUQ4 689 aaKnown RBP9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 VITQ6UXI7 678 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 C4orf50Q6ZRC1 276 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 DPH6Q7L8W6 267 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 ARID3BQ8IVW6 561 aaPredicted RBP9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 GUF1Q8N442 669 aaKnown RBP9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 MAB21L3Q8N8X9 362 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 SHDQ96IW2 340 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 TSG101Q99816 390 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 MED10Q9BTT4 135 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 DPEP3Q9H4B8 488 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 SMYD3Q9H7B4 428 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 CRTAC1Q9NQ79 661 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 SLC2A4RGQ9NR83 387 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 HEBP1Q9NRV9 189 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 HSFX1Q9UBD0 423 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 CDH9Q9ULB4 789 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 TRAF3IP3Q9Y228 551 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 SIT1Q9Y3P8 196 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 PCDHA5Q9Y5H7 936 aa9.53□□□□□ -0.88
CCDC90B-219ENST00000534753 COL4A3Q01955 1670 aa9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 SLC38A8A6NNN8 435 aa9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 BIN1O00499 593 aa9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 CLDN5O00501 218 aa9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 GABRDO14764 452 aa9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 ZNF263O14978 683 aa9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 CAPN5O15484 640 aaPredicted RBP9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 AKAP3O75969 853 aa9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 VNN1O95497 513 aa9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 HLA-DRAP01903 254 aa9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 C4BPAP04003 597 aaKnown RBP9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 CSH1P0DML2 217 aa9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 CSH2P0DML3 217 aa9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 PSMC3P17980 439 aa9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 PTPN1P18031 435 aaKnown RBP9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 AOC1P19801 751 aa9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 CDC25CP30307 473 aa9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 ATICP31939 592 aa9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 PSMC2P35998 433 aaKnown RBP9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 ANP32AP39687 249 aaKnown RBP9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 PRCPP42785 496 aa9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 AP3M2P53677 418 aa9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 NHLH1Q02575 133 aa9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 C6orf118Q5T5N4 469 aa9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 ZNF658Q5TYW1 1059 aaPredicted RBP9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 TCERG1LQ5VWI1 586 aa9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 TXNDC8Q6A555 127 aa9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 SPOPLQ6IQ16 392 aa9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 KLHL10Q6JEL2 608 aa9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 TPRG1Q6ZUI0 275 aa9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 SV2AQ7L0J3 742 aa9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 ALDH16A1Q8IZ83 802 aa9.52□□□□□ -0.89
CCDC90B-219ENST00000534753 ENGASEQ8NFI3 743 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms