RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 HERC2P3Q9BVR0 1158 aa19.47■□□□□ 0.71
SMPD1-208ENST00000533123 FAM53CQ9NYF3 392 aa19.47■□□□□ 0.71
SMPD1-208ENST00000533123 YBX2Q9Y2T7 364 aaKnown RBP19.47■□□□□ 0.71
SMPD1-208ENST00000533123 CDY1Q9Y6F8 540 aa19.47■□□□□ 0.71
SMPD1-208ENST00000533123 OR6C75A6NL08 312 aa19.46■□□□□ 0.71
SMPD1-208ENST00000533123 BEST1O76090 585 aa19.46■□□□□ 0.71
SMPD1-208ENST00000533123 CACNA2D1P54289 1103 aa19.46■□□□□ 0.71
SMPD1-208ENST00000533123 DSG1Q02413 1049 aa19.46■□□□□ 0.71
SMPD1-208ENST00000533123 C1QBPQ07021 282 aaKnown RBP19.46■□□□□ 0.71
SMPD1-208ENST00000533123 ZNF211Q13398 564 aaPredicted RBP19.46■□□□□ 0.71
SMPD1-208ENST00000533123 PMF1Q6P1K2 205 aa19.46■□□□□ 0.71
SMPD1-208ENST00000533123 FAM35AQ86V20 835 aa19.46■□□□□ 0.71
SMPD1-208ENST00000533123 FBXO22Q8NEZ5 403 aa19.46■□□□□ 0.71
SMPD1-208ENST00000533123 HDAC7Q8WUI4 952 aa19.46■□□□□ 0.71
SMPD1-208ENST00000533123 SLC35F5Q8WV83 523 aa19.46■□□□□ 0.71
SMPD1-208ENST00000533123 PGLYRP2Q96PD5 576 aa19.46■□□□□ 0.71
SMPD1-208ENST00000533123 CPXM1Q96SM3 734 aa19.46■□□□□ 0.71
SMPD1-208ENST00000533123 LRRC1Q9BTT6 524 aa19.46■□□□□ 0.71
SMPD1-208ENST00000533123 SELENOOQ9BVL4 669 aa19.46■□□□□ 0.71
SMPD1-208ENST00000533123 DUSP16Q9BY84 665 aa19.46■□□□□ 0.71
SMPD1-208ENST00000533123 ST7Q9NRC1 585 aa19.46■□□□□ 0.71
SMPD1-208ENST00000533123 KRT82Q9NSB4 513 aa19.46■□□□□ 0.71
SMPD1-208ENST00000533123 ARGLU1Q9NWB6 273 aaPredicted RBP19.46■□□□□ 0.71
SMPD1-208ENST00000533123 TJP2Q9UDY2 1190 aa19.46■□□□□ 0.71
SMPD1-208ENST00000533123 RAB21Q9UL25 225 aa19.46■□□□□ 0.71
SMPD1-208ENST00000533123 NLRC5Q86WI3 1866 aa19.46■□□□□ 0.71
SMPD1-208ENST00000533123 ADAM12O43184 909 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 ZMYND10O75800 440 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 SEC31AO94979 1220 aaKnown RBP19.45■□□□□ 0.7
SMPD1-208ENST00000533123 URODP06132 367 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 CPB1P15086 417 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 BDNFP23560 247 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 RGS7P49802 495 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 BCAT1P54687 386 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 BST2Q10589 180 aaKnown RBP19.45■□□□□ 0.7
SMPD1-208ENST00000533123 PDCLQ13371 301 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 MAMLD1Q13495 774 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 PTPN20Q4JDL3 420 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 LIN9Q5TKA1 542 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 ZNF771Q7L3S4 317 aaPredicted RBP19.45■□□□□ 0.7
SMPD1-208ENST00000533123 ERICH1Q86X53 443 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 DCP1BQ8IZD4 617 aaKnown RBP19.45■□□□□ 0.7
SMPD1-208ENST00000533123 ACTRT1Q8TDG2 376 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 PBX4Q9BYU1 374 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 TMEM30AQ9NV96 361 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 MTRRQ9UBK8 725 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 PCDHA11Q9Y5I1 949 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.45■□□□□ 0.7
SMPD1-208ENST00000533123 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.45■□□□□ 0.7
SMPD1-208ENST00000533123 PIK3R2O00459 728 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 SPOPO43791 374 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 AP1G2O75843 785 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 CSPG5O95196 566 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 FAM200BP0CF97 657 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 NPR3P17342 541 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 RGS19P49795 217 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 AADACL2Q6P093 401 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 CLEC20AQ6ZU45 233 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 SPATA2LQ8IUW3 424 aaPredicted RBP19.45■□□□□ 0.7
SMPD1-208ENST00000533123 CD101Q93033 1021 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 VCPIP1Q96JH7 1222 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 KCNK16Q96T55 309 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 AP1M1Q9BXS5 423 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 ABI2Q9NYB9 513 aaPredicted RBP19.45■□□□□ 0.7
SMPD1-208ENST00000533123 PLXNA4Q9HCM2 1894 aa19.45■□□□□ 0.7
SMPD1-208ENST00000533123 PGRMC1O00264 195 aaKnown RBP19.44■□□□□ 0.7
SMPD1-208ENST00000533123 OR1D2P34982 312 aa19.44■□□□□ 0.7
SMPD1-208ENST00000533123 MAP3K7CLP57077 242 aa19.44■□□□□ 0.7
SMPD1-208ENST00000533123 DAB2IPQ5VWQ8 1189 aa19.44■□□□□ 0.7
SMPD1-208ENST00000533123 KRT222Q8N1A0 295 aa19.44■□□□□ 0.7
SMPD1-208ENST00000533123 RASGEF1CQ8N431 466 aa19.44■□□□□ 0.7
SMPD1-208ENST00000533123 CLSTN3Q9BQT9 956 aa19.44■□□□□ 0.7
SMPD1-208ENST00000533123 RWDD3Q9Y3V2 267 aa19.44■□□□□ 0.7
SMPD1-208ENST00000533123 BACE2Q9Y5Z0 518 aa19.44■□□□□ 0.7
SMPD1-208ENST00000533123 MYO7AQ13402 2215 aa19.44■□□□□ 0.7
SMPD1-208ENST00000533123 CYP4A22Q5TCH4 519 aa19.44■□□□□ 0.7
SMPD1-208ENST00000533123 PLEKHA7Q6IQ23 1121 aa19.44■□□□□ 0.7
SMPD1-208ENST00000533123 C4orf50Q6ZRC1 276 aa19.44■□□□□ 0.7
SMPD1-208ENST00000533123 ATAD1Q8NBU5 361 aa19.44■□□□□ 0.7
SMPD1-208ENST00000533123 SMARCD1Q96GM5 515 aa19.44■□□□□ 0.7
SMPD1-208ENST00000533123 SMOQ99835 787 aa19.44■□□□□ 0.7
SMPD1-208ENST00000533123 PLVAPQ9BX97 442 aa19.44■□□□□ 0.7
SMPD1-208ENST00000533123 SYNCQ9H7C4 482 aa19.44■□□□□ 0.7
SMPD1-208ENST00000533123 MRPL17Q9NRX2 175 aaKnown RBP19.44■□□□□ 0.7
SMPD1-208ENST00000533123 SETSIPP0DME0 302 aa19.43■□□□□ 0.7
SMPD1-208ENST00000533123 CYP2F1P24903 491 aa19.43■□□□□ 0.7
SMPD1-208ENST00000533123 CA8P35219 290 aa19.43■□□□□ 0.7
SMPD1-208ENST00000533123 SLC8A3P57103 927 aa19.43■□□□□ 0.7
SMPD1-208ENST00000533123 SLC7A5Q01650 507 aa19.43■□□□□ 0.7
SMPD1-208ENST00000533123 TAP1Q03518 808 aa19.43■□□□□ 0.7
SMPD1-208ENST00000533123 GPR17Q13304 367 aa19.43■□□□□ 0.7
SMPD1-208ENST00000533123 NFE2Q16621 373 aaPredicted RBP19.43■□□□□ 0.7
SMPD1-208ENST00000533123 SLC8B1Q6J4K2 584 aa19.43■□□□□ 0.7
SMPD1-208ENST00000533123 CC2D1AQ6P1N0 951 aaPredicted RBP19.43■□□□□ 0.7
SMPD1-208ENST00000533123 RNF19BQ6ZMZ0 732 aa19.43■□□□□ 0.7
SMPD1-208ENST00000533123 OXCT2Q9BYC2 517 aaPredicted RBP19.43■□□□□ 0.7
SMPD1-208ENST00000533123 ZBP1Q9H171 429 aa19.43■□□□□ 0.7
SMPD1-208ENST00000533123 CARD9Q9H257 536 aa19.43■□□□□ 0.7
SMPD1-208ENST00000533123 TMEM59LQ9UK28 342 aa19.43■□□□□ 0.7
SMPD1-208ENST00000533123 MIF4GDA9UHW6 222 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms