RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 SLC7A9P82251 487 aa12.33□□□□□ -0.44
CMTM1-216ENST00000533078 RPL6Q02878 288 aaKnown RBP12.33□□□□□ -0.44
CMTM1-216ENST00000533078 GFPT1Q06210 699 aaPredicted RBP12.33□□□□□ -0.44
CMTM1-216ENST00000533078 HNRNPDQ14103 355 aaKnown RBP12.33□□□□□ -0.44
CMTM1-216ENST00000533078 RABEP1Q15276 862 aa12.33□□□□□ -0.44
CMTM1-216ENST00000533078 DHCR24Q15392 516 aa12.33□□□□□ -0.44
CMTM1-216ENST00000533078 DUOXA1Q1HG43 343 aa12.33□□□□□ -0.44
CMTM1-216ENST00000533078 DUOXA2Q1HG44 320 aa12.33□□□□□ -0.44
CMTM1-216ENST00000533078 RRAGBQ5VZM2 374 aa12.33□□□□□ -0.44
CMTM1-216ENST00000533078 FAM171BQ6P995 826 aa12.33□□□□□ -0.44
CMTM1-216ENST00000533078 SLC23A3Q6PIS1 610 aa12.33□□□□□ -0.44
CMTM1-216ENST00000533078 HS2ST1Q7LGA3 356 aa12.33□□□□□ -0.44
CMTM1-216ENST00000533078 OSTM1Q86WC4 334 aa12.33□□□□□ -0.44
CMTM1-216ENST00000533078 GPD1LQ8N335 351 aa12.33□□□□□ -0.44
CMTM1-216ENST00000533078 OLIG1Q8TAK6 271 aa12.33□□□□□ -0.44
CMTM1-216ENST00000533078 RLN3Q8WXF3 142 aa12.33□□□□□ -0.44
CMTM1-216ENST00000533078 GATA6Q92908 595 aa12.33□□□□□ -0.44
CMTM1-216ENST00000533078 HPDLQ96IR7 371 aa12.33□□□□□ -0.44
CMTM1-216ENST00000533078 GTPBP2Q9BX10 602 aaKnown RBP12.33□□□□□ -0.44
CMTM1-216ENST00000533078 SNX25Q9H3E2 840 aa12.33□□□□□ -0.44
CMTM1-216ENST00000533078 SMPD4Q9NXE4 827 aa12.33□□□□□ -0.44
CMTM1-216ENST00000533078 TBC1D7Q9P0N9 293 aa12.33□□□□□ -0.44
CMTM1-216ENST00000533078 SLC6A14Q9UN76 642 aa12.33□□□□□ -0.44
CMTM1-216ENST00000533078 WASF3Q9UPY6 502 aa12.33□□□□□ -0.44
CMTM1-216ENST00000533078 MSRB2Q9Y3D2 182 aa12.33□□□□□ -0.44
CMTM1-216ENST00000533078 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.33□□□□□ -0.44
CMTM1-216ENST00000533078 ANKRD11Q6UB99 2663 aaPredicted RBP12.33□□□□□ -0.44
CMTM1-216ENST00000533078 GON4LQ3T8J9 2241 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 TCRBV21S2A2A0A5A6 115 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 GOLGA8IPA6NC78 632 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 TBC1D3BA6NDS4 549 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 ZNF840PA6NDX5 716 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 GOLGA8JA6NMD2 632 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 UPK3BL1B0FP48 263 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 UPK3BL2E5RIL1 263 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 HYAL3O43820 417 aaPredicted RBP12.32□□□□□ -0.44
CMTM1-216ENST00000533078 PPP1R37O75864 691 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 SYPP08247 313 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 MBL2P11226 248 aaPredicted RBP12.32□□□□□ -0.44
CMTM1-216ENST00000533078 NOP14P78316 857 aaKnown RBP12.32□□□□□ -0.44
CMTM1-216ENST00000533078 GAD2Q05329 585 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 KDSRQ06136 332 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 SF3A1Q15459 793 aaKnown RBP12.32□□□□□ -0.44
CMTM1-216ENST00000533078 SOWAHAQ2M3V2 549 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 LARP1BQ659C4 914 aaKnown RBP12.32□□□□□ -0.44
CMTM1-216ENST00000533078 SDE2Q6IQ49 451 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 TMEM92Q6UXU6 159 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 ADGRG2Q8IZP9 1017 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 IL17RCQ8NAC3 791 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 PDZD8Q8NEN9 1154 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 MYCBPAPQ8TBZ2 947 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 KCNV2Q8TDN2 545 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 LRRC15Q8TF66 581 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 OTUB2Q96DC9 234 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 TTLL2Q9BWV7 592 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 ELOVL4Q9GZR5 314 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 PDE11AQ9HCR9 933 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 OLFML3Q9NRN5 406 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 CFAP97Q9P2B7 532 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 LHX6Q9UPM6 363 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 SH3BP1Q9Y3L3 701 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 ATP8B3O60423 1300 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 AKAP13Q12802 2813 aa12.32□□□□□ -0.44
CMTM1-216ENST00000533078 NBEAQ8NFP9 2946 aa12.31□□□□□ -0.44
CMTM1-216ENST00000533078 ZNF233A6NK53 670 aa12.31□□□□□ -0.44
CMTM1-216ENST00000533078 SGK1O00141 431 aa12.31□□□□□ -0.44
CMTM1-216ENST00000533078 ATP2C2O75185 946 aa12.31□□□□□ -0.44
CMTM1-216ENST00000533078 CLSTN1O94985 981 aa12.31□□□□□ -0.44
CMTM1-216ENST00000533078 TOP3BO95985 862 aaKnown RBP12.31□□□□□ -0.44
CMTM1-216ENST00000533078 PDGFRBP09619 1106 aa12.31□□□□□ -0.44
CMTM1-216ENST00000533078 WARSP23381 471 aaKnown RBP12.31□□□□□ -0.44
CMTM1-216ENST00000533078 PTGER3P43115 390 aa12.31□□□□□ -0.44
CMTM1-216ENST00000533078 IFRD2Q12894 506 aaPredicted RBP12.31□□□□□ -0.44
CMTM1-216ENST00000533078 ZNF423Q2M1K9 1284 aa12.31□□□□□ -0.44
CMTM1-216ENST00000533078 MDH1BQ5I0G3 518 aa12.31□□□□□ -0.44
CMTM1-216ENST00000533078 CCDC73Q6ZRK6 1079 aa12.31□□□□□ -0.44
CMTM1-216ENST00000533078 ZNF513Q8N8E2 541 aaPredicted RBP12.31□□□□□ -0.44
CMTM1-216ENST00000533078 PCED1BQ96HM7 432 aa12.31□□□□□ -0.44
CMTM1-216ENST00000533078 C8orf48Q96LL4 319 aa12.31□□□□□ -0.44
CMTM1-216ENST00000533078 FNBP1Q96RU3 617 aa12.31□□□□□ -0.44
CMTM1-216ENST00000533078 TMEM121BQ9BXQ6 578 aaPredicted RBP12.31□□□□□ -0.44
CMTM1-216ENST00000533078 NACA2Q9H009 215 aa12.31□□□□□ -0.44
CMTM1-216ENST00000533078 IKZF4Q9H2S9 585 aa12.31□□□□□ -0.44
CMTM1-216ENST00000533078 PCIF1Q9H4Z3 704 aa12.31□□□□□ -0.44
CMTM1-216ENST00000533078 KIAA1586Q9HCI6 787 aa12.31□□□□□ -0.44
CMTM1-216ENST00000533078 INTS13Q9NVM9 706 aa12.31□□□□□ -0.44
CMTM1-216ENST00000533078 DEC1Q9P2X7 70 aa12.31□□□□□ -0.44
CMTM1-216ENST00000533078 SIX4Q9UIU6 781 aa12.31□□□□□ -0.44
CMTM1-216ENST00000533078 PILRBQ9UKJ0 227 aa12.31□□□□□ -0.44
CMTM1-216ENST00000533078 PCDHB9Q9Y5E1 797 aa12.31□□□□□ -0.44
CMTM1-216ENST00000533078 ATXN2Q99700 1313 aaKnown RBP12.31□□□□□ -0.44
CMTM1-216ENST00000533078 PKD1L2Q7Z442 2459 aa12.31□□□□□ -0.44
CMTM1-216ENST00000533078 PCNX2A6NKB5 2137 aa12.31□□□□□ -0.44
CMTM1-216ENST00000533078 SPAARA0A1B0GVQ0 90 aa12.3□□□□□ -0.44
CMTM1-216ENST00000533078 E2F8A0AVK6 867 aa12.3□□□□□ -0.44
CMTM1-216ENST00000533078 F8VP50 259 aa12.3□□□□□ -0.44
CMTM1-216ENST00000533078 HCRTO43612 131 aa12.3□□□□□ -0.44
CMTM1-216ENST00000533078 ZNF217O75362 1048 aa12.3□□□□□ -0.44
CMTM1-216ENST00000533078 RTN3O95197 1032 aaPredicted RBP12.3□□□□□ -0.44
CMTM1-216ENST00000533078 SERPINF2P08697 491 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms